RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 EHD4Q9H223 541 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 RASSF4Q9H2L5 321 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 EPB41L5Q9HCM4 733 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 KCNMB3Q9NPA1 279 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 SALL4Q9UJQ4 1053 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 ATF5Q9Y2D1 282 aaPredicted RBP12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PCDHB13Q9Y5F0 798 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 A0A087X0T9 212 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 SHTN1A0MZ66 631 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 KCNK3O14649 394 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PRPF6O94906 941 aaKnown RBP12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 FAM13AO94988 1023 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 FAM228BP0C875 321 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 IRX5P78411 483 aaPredicted RBP12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 ABCB5Q2M3G0 1257 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 C10orf76Q5T2E6 689 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 GBP6Q6ZN66 633 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 TMEM179Q6ZVK1 233 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 FAM20AQ96MK3 541 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 KRT12Q99456 494 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 BHMT2Q9H2M3 363 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 GOLGA6L10A6NI86 522 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 MYO1CO00159 1063 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 GDF11O95390 407 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 SLURP2P0DP57 97 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 RPA1P27694 616 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 APBA1Q02410 837 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 ASTE1Q2TB18 679 aaPredicted RBP12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 ALS2CLQ60I27 953 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 MOXD1Q6UVY6 613 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 FRMD5Q7Z6J6 570 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 LMBR1Q8WVP7 490 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 RABGAP1Q9Y3P9 1069 aa12.83□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 BTAF1O14981 1849 aa12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 TBX3O15119 743 aa12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PODNQ7Z5L7 613 aa12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 REEP2Q9BRK0 252 aa12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PACSIN2Q9UNF0 486 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 TLR2O60603 784 aa12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 NOL4O94818 638 aa12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PDE6BP35913 854 aa12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 TRAF1Q13077 416 aa12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 RBM26Q5T8P6 1007 aaKnown RBP12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 KLHL7Q8IXQ5 586 aa12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 NLGN1Q8N2Q7 840 aa12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 KCTD10Q9H3F6 313 aa12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 ZNF219Q9P2Y4 722 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 DDX60LQ5H9U9 1706 aaKnown RBP12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 MYH1P12882 1939 aa12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 RBAK-RBAKDNI3L0D1 243 aa12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 ACTN1P12814 892 aa12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 HOXA13P31271 388 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 MARSP56192 900 aaKnown RBP12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 SYDE2Q5VT97 1194 aa12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 ZFPM1Q8IX07 1006 aa12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 CAPS2Q9BXY5 557 aa12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 AIPL1Q9NZN9 384 aa12.82□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PDXKO00764 312 aa12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 CHMP2AO43633 222 aa12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 CEP104O60308 925 aa12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PPFIA4O75335 1185 aa12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 BMP3P12645 472 aa12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 UCHL3P15374 230 aa12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 SLC9A1P19634 815 aa12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 SLC12A3P55017 1021 aa12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 ALKBH5Q6P6C2 394 aaKnown RBP12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 STXBP4Q6ZWJ1 553 aa12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 HS2ST1Q7LGA3 356 aa12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 ZNF572Q7Z3I7 529 aaPredicted RBP12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 SRLQ86TD4 932 aa12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 MYCT1Q8N699 235 aa12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 SYT2Q8N9I0 419 aaPredicted RBP12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 NFU1Q9UMS0 254 aa12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 CYP3A7-CYP3A51PA0A087WV96 503 aa12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 GRID2IPA4D2P6 1211 aa12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 NR3C1P04150 777 aa12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 CYP3A7P24462 503 aa12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 GUCY2FP51841 1108 aa12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 GIT2Q14161 759 aa12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 TYW1Q9NV66 732 aaKnown RBP12.81□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 ESYT3A0FGR9 886 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 CLIC2O15247 247 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 TRIM37O94972 964 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PSMC6P62333 389 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PTK2Q05397 1052 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 LRRC31Q6UY01 552 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 MAATS1Q7Z4T9 603 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 TPH2Q8IWU9 490 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 ZDHHC15Q96MV8 337 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 CENPHQ9H3R5 247 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 POLD4Q9HCU8 107 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 SEPT11Q9NVA2 429 aaKnown RBP12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 GCNT4Q9P109 453 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 MEIS2O14770 477 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 CFBP00751 764 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 ARSHQ5FYA8 562 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 SPICE1Q8N0Z3 855 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 MKL1Q969V6 931 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 CCDC43Q96MW1 224 aaKnown RBP12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 TMOD2Q9NZR1 351 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms