RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 AZI2Q9H6S1 392 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 TMEM39AQ9NV64 488 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 ERAP1Q9NZ08 941 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 PRKAG2Q9UGJ0 569 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 GTF2IRD1Q9UHL9 959 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 VAV3Q9UKW4 847 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 SAMM50Q9Y512 469 aa14.09□□□□□ -0.15
SKA1-203ENST00000417656 MYH15Q9Y2K3 1946 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 IGKV6D-21A0A0A0MT36 114 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 KIAA0355O15063 1070 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 TBX3O15119 743 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 MARCH6O60337 910 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 CYP2C9P11712 490 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 SYT1P21579 422 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 TRAPPC10P48553 1259 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 TOB1P50616 345 aaPredicted RBP14.08□□□□□ -0.16
SKA1-203ENST00000417656 JAK3P52333 1124 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 HIC1Q14526 733 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 ZNF174Q15697 407 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 PRPF38BQ5VTL8 546 aaKnown RBP14.08□□□□□ -0.16
SKA1-203ENST00000417656 FAM160B1Q5W0V3 765 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 B3GNT9Q6UX72 402 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 MIER3Q7Z3K6 550 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 FERMT3Q86UX7 667 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 SPRYD3Q8NCJ5 442 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 PPP1R12CQ9BZL4 782 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 TMEM60Q9H2L4 133 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 RNPEPQ9H4A4 650 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 ZNF302Q9NR11 478 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 DISC1Q9NRI5 854 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 NOD1Q9Y239 953 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 PCDHA10Q9Y5I2 948 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 MYH9P35579 1960 aaKnown RBP14.08□□□□□ -0.16
SKA1-203ENST00000417656 TRIP12Q14669 1992 aaPredicted RBP14.08□□□□□ -0.16
SKA1-203ENST00000417656 IGSF9BQ9UPX0 1349 aa14.08□□□□□ -0.16
SKA1-203ENST00000417656 C17orf102A2RUQ5 167 aa14.07□□□□□ -0.16
SKA1-203ENST00000417656 PSAPP07602 524 aa14.07□□□□□ -0.16
SKA1-203ENST00000417656 ITGB8P26012 769 aa14.07□□□□□ -0.16
SKA1-203ENST00000417656 SFNP31947 248 aa14.07□□□□□ -0.16
SKA1-203ENST00000417656 STAT5BP51692 787 aa14.07□□□□□ -0.16
SKA1-203ENST00000417656 ZNF200P98182 395 aaPredicted RBP14.07□□□□□ -0.16
SKA1-203ENST00000417656 PPFIA1Q13136 1202 aa14.07□□□□□ -0.16
SKA1-203ENST00000417656 PLCB4Q15147 1175 aa14.07□□□□□ -0.16
SKA1-203ENST00000417656 PTGISQ16647 500 aa14.07□□□□□ -0.16
SKA1-203ENST00000417656 UGCGQ16739 394 aa14.07□□□□□ -0.16
SKA1-203ENST00000417656 SWSAP1Q6NVH7 229 aa14.07□□□□□ -0.16
SKA1-203ENST00000417656 PDXDC2PQ6P474 469 aa14.07□□□□□ -0.16
SKA1-203ENST00000417656 AFAP1L1Q8TED9 768 aa14.07□□□□□ -0.16
SKA1-203ENST00000417656 LMBR1Q8WVP7 490 aa14.07□□□□□ -0.16
SKA1-203ENST00000417656 CTAGE1Q96RT6 745 aa14.07□□□□□ -0.16
SKA1-203ENST00000417656 GABBR1Q9UBS5 961 aa14.07□□□□□ -0.16
SKA1-203ENST00000417656 TRPC6Q9Y210 931 aa14.07□□□□□ -0.16
SKA1-203ENST00000417656 FARP1Q9Y4F1 1045 aaPredicted RBP14.07□□□□□ -0.16
SKA1-203ENST00000417656 CEP290O15078 2479 aa14.07□□□□□ -0.16
SKA1-203ENST00000417656 UMODL1Q5DID0 1318 aa14.07□□□□□ -0.16
SKA1-203ENST00000417656 EML1O00423 815 aa14.06□□□□□ -0.16
SKA1-203ENST00000417656 BAG4O95429 457 aaKnown RBP14.06□□□□□ -0.16
SKA1-203ENST00000417656 OR52Z1P0C646 297 aa14.06□□□□□ -0.16
SKA1-203ENST00000417656 RAG1P15918 1043 aa14.06□□□□□ -0.16
SKA1-203ENST00000417656 HOXC8P31273 242 aa14.06□□□□□ -0.16
SKA1-203ENST00000417656 MAGEA10P43363 369 aaPredicted RBP14.06□□□□□ -0.16
SKA1-203ENST00000417656 MDM2Q00987 491 aaPredicted RBP14.06□□□□□ -0.16
SKA1-203ENST00000417656 SPIRE1Q08AE8 756 aa14.06□□□□□ -0.16
SKA1-203ENST00000417656 PPP2R5CQ13362 524 aa14.06□□□□□ -0.16
SKA1-203ENST00000417656 ORC2Q13416 577 aaPredicted RBP14.06□□□□□ -0.16
SKA1-203ENST00000417656 NCAPH2Q6IBW4 605 aa14.06□□□□□ -0.16
SKA1-203ENST00000417656 PLPPR4Q7Z2D5 763 aa14.06□□□□□ -0.16
SKA1-203ENST00000417656 SLFN12Q8IYM2 578 aa14.06□□□□□ -0.16
SKA1-203ENST00000417656 RDM1Q8NG50 284 aa14.06□□□□□ -0.16
SKA1-203ENST00000417656 DHX38Q92620 1227 aaKnown RBP14.06□□□□□ -0.16
SKA1-203ENST00000417656 MTMR9Q96QG7 549 aa14.06□□□□□ -0.16
SKA1-203ENST00000417656 NOC4LQ9BVI4 516 aaKnown RBP14.06□□□□□ -0.16
SKA1-203ENST00000417656 HIPK3Q9H422 1215 aa14.06□□□□□ -0.16
SKA1-203ENST00000417656 SETD4Q9NVD3 440 aa14.06□□□□□ -0.16
SKA1-203ENST00000417656 MTMR6Q9Y217 621 aa14.06□□□□□ -0.16
SKA1-203ENST00000417656 PCDHB6Q9Y5E3 794 aa14.06□□□□□ -0.16
SKA1-203ENST00000417656 TXKP42681 527 aa14.05□□□□□ -0.16
SKA1-203ENST00000417656 IGBP1P78318 339 aa14.05□□□□□ -0.16
SKA1-203ENST00000417656 PRKCEQ02156 737 aa14.05□□□□□ -0.16
SKA1-203ENST00000417656 RESTQ13127 1097 aa14.05□□□□□ -0.16
SKA1-203ENST00000417656 GRIK4Q16099 956 aa14.05□□□□□ -0.16
SKA1-203ENST00000417656 RILPL1Q5EBL4 403 aa14.05□□□□□ -0.16
SKA1-203ENST00000417656 BRAPQ7Z569 592 aa14.05□□□□□ -0.16
SKA1-203ENST00000417656 CKAP2LQ8IYA6 745 aa14.05□□□□□ -0.16
SKA1-203ENST00000417656 BANK1Q8NDB2 785 aa14.05□□□□□ -0.16
SKA1-203ENST00000417656 TRAPPC12Q8WVT3 735 aa14.05□□□□□ -0.16
SKA1-203ENST00000417656 BADQ92934 168 aa14.05□□□□□ -0.16
SKA1-203ENST00000417656 ATP6V0A1Q93050 837 aa14.05□□□□□ -0.16
SKA1-203ENST00000417656 WNT8BQ93098 351 aa14.05□□□□□ -0.16
SKA1-203ENST00000417656 TTC12Q9H892 705 aaPredicted RBP14.05□□□□□ -0.16
SKA1-203ENST00000417656 MAFBQ9Y5Q3 323 aaPredicted RBP14.05□□□□□ -0.16
SKA1-203ENST00000417656 ARID2Q68CP9 1835 aa14.05□□□□□ -0.16
SKA1-203ENST00000417656 KAT6AQ92794 2004 aa14.05□□□□□ -0.16
SKA1-203ENST00000417656 POTEB3A0JP26 581 aa14.04□□□□□ -0.16
SKA1-203ENST00000417656 POTEMA6NI47 508 aa14.04□□□□□ -0.16
SKA1-203ENST00000417656 TREHO43280 583 aa14.04□□□□□ -0.16
SKA1-203ENST00000417656 STX6O43752 255 aa14.04□□□□□ -0.16
SKA1-203ENST00000417656 ZNF862O60290 1169 aa14.04□□□□□ -0.16
SKA1-203ENST00000417656 TIMP1P01033 207 aa14.04□□□□□ -0.16
SKA1-203ENST00000417656 INSRRP14616 1297 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms