RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 SYN2Q92777 582 aaPredicted RBP15.91■□□□□ 0.14
HDAC9-208ENST00000417496 ZIM3Q96PE6 472 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 REEP2Q9BRK0 252 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 SWAP70Q9UH65 585 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 DDTLA6NHG4 134 aaPredicted RBP15.91■□□□□ 0.14
HDAC9-208ENST00000417496 FAM86B1E9PN63 330 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 CETN3O15182 167 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 FAM86B2P0C5J1 330 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 SPATA31C1P0DKV0 1188 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 HOXA13P31271 388 aaPredicted RBP15.91■□□□□ 0.14
HDAC9-208ENST00000417496 CASP4P49662 377 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 ARHGAP4P98171 946 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 SPIRE1Q08AE8 756 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 MEI1Q5TIA1 1274 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 TCERG1LQ5VWI1 586 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 GJB7Q6PEY0 223 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 COA1Q9GZY4 146 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 AIPL1Q9NZN9 384 aa15.91■□□□□ 0.14
HDAC9-208ENST00000417496 CLIC2O15247 247 aa15.9■□□□□ 0.14
HDAC9-208ENST00000417496 AKAP3O75969 853 aa15.9■□□□□ 0.14
HDAC9-208ENST00000417496 GNA14O95837 355 aa15.9■□□□□ 0.14
HDAC9-208ENST00000417496 HLA-DOAP06340 250 aa15.9■□□□□ 0.14
HDAC9-208ENST00000417496 CCT5P48643 541 aa15.9■□□□□ 0.14
HDAC9-208ENST00000417496 ATP1A2P50993 1020 aa15.9■□□□□ 0.14
HDAC9-208ENST00000417496 SLFN13Q68D06 897 aa15.9■□□□□ 0.14
HDAC9-208ENST00000417496 EMBQ6PCB8 327 aa15.9■□□□□ 0.14
HDAC9-208ENST00000417496 IRF2BP2Q7Z5L9 587 aa15.9■□□□□ 0.14
HDAC9-208ENST00000417496 KIAA0825Q8IV33 1275 aa15.9■□□□□ 0.14
HDAC9-208ENST00000417496 RBM46Q8TBY0 533 aaKnown RBP15.9■□□□□ 0.14
HDAC9-208ENST00000417496 BBXQ8WY36 941 aaPredicted RBP15.9■□□□□ 0.14
HDAC9-208ENST00000417496 CCDC43Q96MW1 224 aaKnown RBP15.9■□□□□ 0.14
HDAC9-208ENST00000417496 SH3GL2Q99962 352 aa15.9■□□□□ 0.14
HDAC9-208ENST00000417496 CAPS2Q9BXY5 557 aa15.9■□□□□ 0.14
HDAC9-208ENST00000417496 NUCKS1Q9H1E3 243 aaKnown RBP15.9■□□□□ 0.14
HDAC9-208ENST00000417496 AJAP1Q9UKB5 411 aaPredicted RBP15.9■□□□□ 0.14
HDAC9-208ENST00000417496 POLRMTO00411 1230 aaKnown RBP15.9■□□□□ 0.14
HDAC9-208ENST00000417496 KCNK3O14649 394 aa15.9■□□□□ 0.14
HDAC9-208ENST00000417496 UCHL3P15374 230 aa15.9■□□□□ 0.14
HDAC9-208ENST00000417496 NOP2P46087 812 aaKnown RBP15.9■□□□□ 0.14
HDAC9-208ENST00000417496 MARSP56192 900 aaKnown RBP15.9■□□□□ 0.14
HDAC9-208ENST00000417496 SIAH1Q8IUQ4 282 aa15.9■□□□□ 0.14
HDAC9-208ENST00000417496 SPAG5Q96R06 1193 aa15.9■□□□□ 0.14
HDAC9-208ENST00000417496 DBNDD1Q9H9R9 158 aa15.9■□□□□ 0.14
HDAC9-208ENST00000417496 PCDHGC5Q9Y5F6 944 aa15.9■□□□□ 0.14
HDAC9-208ENST00000417496 SHOX2O60902 331 aaPredicted RBP15.89■□□□□ 0.13
HDAC9-208ENST00000417496 HSF2BPO75031 334 aa15.89■□□□□ 0.13
HDAC9-208ENST00000417496 GNGT1P63211 74 aa15.89■□□□□ 0.13
HDAC9-208ENST00000417496 IKQ13123 557 aaPredicted RBP15.89■□□□□ 0.13
HDAC9-208ENST00000417496 DPY19L2P1Q6NXN4 242 aa15.89■□□□□ 0.13
HDAC9-208ENST00000417496 IFT20Q8IY31 132 aa15.89■□□□□ 0.13
HDAC9-208ENST00000417496 ETNPPLQ8TBG4 499 aa15.89■□□□□ 0.13
HDAC9-208ENST00000417496 CASKIN2Q8WXE0 1202 aa15.89■□□□□ 0.13
HDAC9-208ENST00000417496 INPP4AQ96PE3 977 aaPredicted RBP15.89■□□□□ 0.13
HDAC9-208ENST00000417496 CRAMP1Q96RY5 1269 aa15.89■□□□□ 0.13
HDAC9-208ENST00000417496 RUFY1Q96T51 708 aa15.89■□□□□ 0.13
HDAC9-208ENST00000417496 RGL1Q9NZL6 768 aa15.89■□□□□ 0.13
HDAC9-208ENST00000417496 ARMCX3Q9UH62 379 aaPredicted RBP15.89■□□□□ 0.13
HDAC9-208ENST00000417496 G3V3G9 751 aa15.89■□□□□ 0.13
HDAC9-208ENST00000417496 GDF11O95390 407 aa15.89■□□□□ 0.13
HDAC9-208ENST00000417496 PON1P27169 355 aa15.89■□□□□ 0.13
HDAC9-208ENST00000417496 USP11P51784 963 aa15.89■□□□□ 0.13
HDAC9-208ENST00000417496 RBM5P52756 815 aaKnown RBP eCLIP15.89■□□□□ 0.13
HDAC9-208ENST00000417496 KNOP1Q1ED39 458 aaKnown RBP15.89■□□□□ 0.13
HDAC9-208ENST00000417496 DCAF8Q5TAQ9 597 aa15.89■□□□□ 0.13
HDAC9-208ENST00000417496 FOXR2Q6PJQ5 311 aa15.89■□□□□ 0.13
HDAC9-208ENST00000417496 SP8Q8IXZ3 490 aa15.89■□□□□ 0.13
HDAC9-208ENST00000417496 TEKT1Q969V4 418 aa15.89■□□□□ 0.13
HDAC9-208ENST00000417496 BHMT2Q9H2M3 363 aa15.89■□□□□ 0.13
HDAC9-208ENST00000417496 GDF3Q9NR23 364 aa15.89■□□□□ 0.13
HDAC9-208ENST00000417496 NHSQ6T4R5 1651 aa15.88■□□□□ 0.13
HDAC9-208ENST00000417496 FRMD3A2A2Y4 597 aa15.88■□□□□ 0.13
HDAC9-208ENST00000417496 ZNF233A6NK53 670 aa15.88■□□□□ 0.13
HDAC9-208ENST00000417496 ZBTB39O15060 712 aa15.88■□□□□ 0.13
HDAC9-208ENST00000417496 RAD51CO43502 376 aa15.88■□□□□ 0.13
HDAC9-208ENST00000417496 BCAS4Q8TDM0 211 aa15.88■□□□□ 0.13
HDAC9-208ENST00000417496 CAVIN3Q969G5 261 aa15.88■□□□□ 0.13
HDAC9-208ENST00000417496 LENG9Q96B70 501 aa15.88■□□□□ 0.13
HDAC9-208ENST00000417496 AP1M1Q9BXS5 423 aa15.88■□□□□ 0.13
HDAC9-208ENST00000417496 TSKSQ9UJT2 592 aa15.88■□□□□ 0.13
HDAC9-208ENST00000417496 DNM3Q9UQ16 869 aa15.88■□□□□ 0.13
HDAC9-208ENST00000417496 PPFIA1Q13136 1202 aa15.88■□□□□ 0.13
HDAC9-208ENST00000417496 PDCLQ13371 301 aa15.88■□□□□ 0.13
HDAC9-208ENST00000417496 EXOC3L4Q17RC7 722 aa15.88■□□□□ 0.13
HDAC9-208ENST00000417496 CERKLQ49MI3 558 aaPredicted RBP15.88■□□□□ 0.13
HDAC9-208ENST00000417496 KSR1Q8IVT5 923 aa15.88■□□□□ 0.13
HDAC9-208ENST00000417496 SPICE1Q8N0Z3 855 aa15.88■□□□□ 0.13
HDAC9-208ENST00000417496 PIGOQ8TEQ8 1089 aa15.88■□□□□ 0.13
HDAC9-208ENST00000417496 RUSC1Q9BVN2 902 aa15.88■□□□□ 0.13
HDAC9-208ENST00000417496 LUC7LQ9NQ29 371 aaKnown RBP15.88■□□□□ 0.13
HDAC9-208ENST00000417496 PCDHB13Q9Y5F0 798 aa15.88■□□□□ 0.13
HDAC9-208ENST00000417496 GRIN2DO15399 1336 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 OPA1O60313 960 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 ADRA2BP18089 450 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 CRKP46108 304 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 NNTQ13423 1086 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 EDRF1Q3B7T1 1238 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 SH3BP5LQ7L8J4 393 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 DDX42Q86XP3 938 aaKnown RBP eCLIP15.87■□□□□ 0.13
HDAC9-208ENST00000417496 PIK3R5Q8WYR1 880 aa15.87■□□□□ 0.13
HDAC9-208ENST00000417496 SAMM50Q9Y512 469 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms