RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 CATIPQ7Z7H3 387 aa20.69■□□□□ 0.9
VCP-202ENST00000417448 SMRP1Q8NCR6 262 aa20.69■□□□□ 0.9
VCP-202ENST00000417448 LARP6Q9BRS8 491 aaKnown RBP20.69■□□□□ 0.9
VCP-202ENST00000417448 KLRF2D3W0D1 207 aa20.68■□□□□ 0.9
VCP-202ENST00000417448 H3BRB1 525 aa20.68■□□□□ 0.9
VCP-202ENST00000417448 OPLAHO14841 1288 aa20.68■□□□□ 0.9
VCP-202ENST00000417448 DHX16O60231 1041 aaKnown RBP20.68■□□□□ 0.9
VCP-202ENST00000417448 UBA1P22314 1058 aaKnown RBP20.68■□□□□ 0.9
VCP-202ENST00000417448 RPS6KB1P23443 525 aa20.68■□□□□ 0.9
VCP-202ENST00000417448 NDUFV1P49821 464 aa20.68■□□□□ 0.9
VCP-202ENST00000417448 QRICH1Q2TAL8 776 aa20.68■□□□□ 0.9
VCP-202ENST00000417448 ADGRD2Q7Z7M1 963 aa20.68■□□□□ 0.9
VCP-202ENST00000417448 MCF2L2Q86YR7 1114 aa20.68■□□□□ 0.9
VCP-202ENST00000417448 ADGRF4Q8IZF3 695 aa20.68■□□□□ 0.9
VCP-202ENST00000417448 CMTR1Q8N1G2 835 aaKnown RBP20.68■□□□□ 0.9
VCP-202ENST00000417448 PIBF1Q8WXW3 757 aa20.68■□□□□ 0.9
VCP-202ENST00000417448 APBB2Q92870 758 aa20.68■□□□□ 0.9
VCP-202ENST00000417448 GPKOWQ92917 476 aaPredicted RBP eCLIP20.68■□□□□ 0.9
VCP-202ENST00000417448 ASIC4Q96FT7 647 aa20.68■□□□□ 0.9
VCP-202ENST00000417448 TUT1Q9H6E5 874 aaKnown RBP20.68■□□□□ 0.9
VCP-202ENST00000417448 BCAS3Q9H6U6 928 aa20.68■□□□□ 0.9
VCP-202ENST00000417448 NAP1L2Q9ULW6 460 aaPredicted RBP20.68■□□□□ 0.9
VCP-202ENST00000417448 PLXNA4Q9HCM2 1894 aa20.67■□□□□ 0.9
VCP-202ENST00000417448 PALM3A6NDB9 673 aaPredicted RBP20.67■□□□□ 0.9
VCP-202ENST00000417448 CAND2O75155 1236 aa20.67■□□□□ 0.9
VCP-202ENST00000417448 DNAJB1P25685 340 aa20.67■□□□□ 0.9
VCP-202ENST00000417448 FOXK2Q01167 660 aa20.67■□□□□ 0.9
VCP-202ENST00000417448 APOBRQ0VD83 1088 aa20.67■□□□□ 0.9
VCP-202ENST00000417448 ASPRV1Q53RT3 343 aa20.67■□□□□ 0.9
VCP-202ENST00000417448 RWDD3Q9Y3V2 267 aa20.67■□□□□ 0.9
VCP-202ENST00000417448 FAM186AA6NE01 2351 aa20.67■□□□□ 0.9
VCP-202ENST00000417448 EPB41L2O43491 1005 aaKnown RBP20.66■□□□□ 0.9
VCP-202ENST00000417448 GLP2RO95838 553 aa20.66■□□□□ 0.9
VCP-202ENST00000417448 CFBP00751 764 aa20.66■□□□□ 0.9
VCP-202ENST00000417448 LGALS2P05162 132 aa20.66■□□□□ 0.9
VCP-202ENST00000417448 MYCLP12524 364 aaPredicted RBP20.66■□□□□ 0.9
VCP-202ENST00000417448 LIFRP42702 1097 aa20.66■□□□□ 0.9
VCP-202ENST00000417448 FGD1P98174 961 aa20.66■□□□□ 0.9
VCP-202ENST00000417448 SIGLEC14Q08ET2 396 aa20.66■□□□□ 0.9
VCP-202ENST00000417448 IL31RAQ8NI17 732 aa20.66■□□□□ 0.9
VCP-202ENST00000417448 ATOH1Q92858 354 aaPredicted RBP20.66■□□□□ 0.9
VCP-202ENST00000417448 ZNF689Q96CS4 500 aaPredicted RBP20.66■□□□□ 0.9
VCP-202ENST00000417448 ZFP91Q96JP5 570 aaPredicted RBP20.66■□□□□ 0.9
VCP-202ENST00000417448 PDCD2LQ9BRP1 358 aa20.66■□□□□ 0.9
VCP-202ENST00000417448 JMJD4Q9H9V9 463 aa20.66■□□□□ 0.9
VCP-202ENST00000417448 SETD4Q9NVD3 440 aa20.66■□□□□ 0.9
VCP-202ENST00000417448 PLAGL2Q9UPG8 496 aa20.66■□□□□ 0.9
VCP-202ENST00000417448 KAT6AQ92794 2004 aa20.65■□□□□ 0.9
VCP-202ENST00000417448 KLF18A0A0U1RQI7 1052 aa20.65■□□□□ 0.9
VCP-202ENST00000417448 PLEKHA8P1O95397 391 aa20.65■□□□□ 0.9
VCP-202ENST00000417448 PSMA5P28066 241 aa20.65■□□□□ 0.9
VCP-202ENST00000417448 HSD17B4P51659 736 aa20.65■□□□□ 0.9
VCP-202ENST00000417448 COASYQ13057 564 aa20.65■□□□□ 0.9
VCP-202ENST00000417448 FAM26DQ5JW98 314 aa20.65■□□□□ 0.9
VCP-202ENST00000417448 MICU3Q86XE3 530 aa20.65■□□□□ 0.9
VCP-202ENST00000417448 BRF1Q92994 677 aa20.65■□□□□ 0.9
VCP-202ENST00000417448 ZSWIM6Q9HCJ5 1215 aa20.65■□□□□ 0.9
VCP-202ENST00000417448 MRPL11Q9Y3B7 192 aaKnown RBP20.65■□□□□ 0.9
VCP-202ENST00000417448 USP15Q9Y4E8 981 aaPredicted RBP20.65■□□□□ 0.9
VCP-202ENST00000417448 SLC12A7Q9Y666 1083 aa20.65■□□□□ 0.9
VCP-202ENST00000417448 CHRNA1P02708 482 aa20.64■□□□□ 0.89
VCP-202ENST00000417448 HMGB1P09429 215 aaKnown RBP20.64■□□□□ 0.89
VCP-202ENST00000417448 AVPR2P30518 371 aa20.64■□□□□ 0.89
VCP-202ENST00000417448 BTG3Q14201 252 aaPredicted RBP20.64■□□□□ 0.89
VCP-202ENST00000417448 RUFY3Q7L099 469 aa20.64■□□□□ 0.89
VCP-202ENST00000417448 TMTC2Q8N394 836 aa20.64■□□□□ 0.89
VCP-202ENST00000417448 CCDC82Q8N4S0 544 aa20.64■□□□□ 0.89
VCP-202ENST00000417448 EFHBQ8N7U6 833 aa20.64■□□□□ 0.89
VCP-202ENST00000417448 MTA3Q9BTC8 594 aa20.64■□□□□ 0.89
VCP-202ENST00000417448 PLVAPQ9BX97 442 aa20.64■□□□□ 0.89
VCP-202ENST00000417448 BARX2Q9UMQ3 279 aaPredicted RBP20.64■□□□□ 0.89
VCP-202ENST00000417448 hCG_1642624A0A1W2PR95 340 aa20.63■□□□□ 0.89
VCP-202ENST00000417448 H0Y858 1186 aa20.63■□□□□ 0.89
VCP-202ENST00000417448 CYTH3O43739 400 aa20.63■□□□□ 0.89
VCP-202ENST00000417448 DDAH1O94760 285 aa20.63■□□□□ 0.89
VCP-202ENST00000417448 ITGB1P05556 798 aa20.63■□□□□ 0.89
VCP-202ENST00000417448 ADAM17P78536 824 aa20.63■□□□□ 0.89
VCP-202ENST00000417448 GHRHRQ02643 423 aa20.63■□□□□ 0.89
VCP-202ENST00000417448 PGM5Q15124 567 aa20.63■□□□□ 0.89
VCP-202ENST00000417448 KCNV1Q6PIU1 500 aa20.63■□□□□ 0.89
VCP-202ENST00000417448 APOA5Q6Q788 366 aa20.63■□□□□ 0.89
VCP-202ENST00000417448 ASCL5Q7RTU5 278 aa20.63■□□□□ 0.89
VCP-202ENST00000417448 VSIG10LQ86VR7 867 aa20.63■□□□□ 0.89
VCP-202ENST00000417448 SGMS1Q86VZ5 419 aa20.63■□□□□ 0.89
VCP-202ENST00000417448 HOMER1Q86YM7 354 aa20.63■□□□□ 0.89
VCP-202ENST00000417448 TLR9Q9NR96 1032 aa20.63■□□□□ 0.89
VCP-202ENST00000417448 PCDHGC5Q9Y5F6 944 aa20.63■□□□□ 0.89
VCP-202ENST00000417448 CYP46A1Q9Y6A2 500 aa20.63■□□□□ 0.89
VCP-202ENST00000417448 WDR87Q6ZQQ6 2873 aa20.63■□□□□ 0.89
VCP-202ENST00000417448 PDGFBP01127 241 aaPredicted RBP20.62■□□□□ 0.89
VCP-202ENST00000417448 GHRP10912 638 aa20.62■□□□□ 0.89
VCP-202ENST00000417448 TOB2Q14106 344 aaPredicted RBP20.62■□□□□ 0.89
VCP-202ENST00000417448 TRIM50Q86XT4 487 aa20.62■□□□□ 0.89
VCP-202ENST00000417448 SRBD1Q8N5C6 995 aaKnown RBP20.62■□□□□ 0.89
VCP-202ENST00000417448 CTCFLQ8NI51 663 aaPredicted RBP20.62■□□□□ 0.89
VCP-202ENST00000417448 SPPL3Q8TCT6 385 aa20.62■□□□□ 0.89
VCP-202ENST00000417448 RPGRIP1Q96KN7 1286 aa20.62■□□□□ 0.89
VCP-202ENST00000417448 PIGSQ96S52 555 aa20.62■□□□□ 0.89
VCP-202ENST00000417448 EHMT1Q9H9B1 1298 aa20.62■□□□□ 0.89
VCP-202ENST00000417448 MLXIPQ9HAP2 919 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms