RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 I3L4J1 428 aa16.96■□□□□ 0.31
PHRF1-203ENST00000416188 ADCY8P40145 1251 aa16.96■□□□□ 0.31
PHRF1-203ENST00000416188 PDE6CP51160 858 aa16.96■□□□□ 0.31
PHRF1-203ENST00000416188 CUL4AQ13619 759 aa16.96■□□□□ 0.31
PHRF1-203ENST00000416188 ACCSQ96QU6 501 aa16.96■□□□□ 0.31
PHRF1-203ENST00000416188 C6orf222P0C671 652 aaPredicted RBP16.96■□□□□ 0.31
PHRF1-203ENST00000416188 PIK3CAP42336 1068 aa16.96■□□□□ 0.31
PHRF1-203ENST00000416188 FCGRTP55899 365 aa16.96■□□□□ 0.31
PHRF1-203ENST00000416188 NAA25Q14CX7 972 aa16.96■□□□□ 0.31
PHRF1-203ENST00000416188 CCDC62Q6P9F0 684 aa16.96■□□□□ 0.31
PHRF1-203ENST00000416188 UHMK1Q8TAS1 419 aaKnown RBP16.96■□□□□ 0.31
PHRF1-203ENST00000416188 CACTINQ8WUQ7 758 aaKnown RBP16.96■□□□□ 0.31
PHRF1-203ENST00000416188 NAA35Q5VZE5 725 aa16.96■□□□□ 0.31
PHRF1-203ENST00000416188 TBC1D22BQ9NU19 505 aa16.96■□□□□ 0.31
PHRF1-203ENST00000416188 PNPLA7Q6ZV29 1317 aa16.96■□□□□ 0.3
PHRF1-203ENST00000416188 TFAMQ00059 246 aaKnown RBP16.95■□□□□ 0.3
PHRF1-203ENST00000416188 LRRC41Q15345 812 aa16.95■□□□□ 0.3
PHRF1-203ENST00000416188 CAPN12Q6ZSI9 719 aa16.95■□□□□ 0.3
PHRF1-203ENST00000416188 LINC00301Q8NCQ3 95 aa16.95■□□□□ 0.3
PHRF1-203ENST00000416188 NUDT12Q9BQG2 462 aa16.95■□□□□ 0.3
PHRF1-203ENST00000416188 SNX25Q9H3E2 840 aa16.95■□□□□ 0.3
PHRF1-203ENST00000416188 HAUS2Q9NVX0 235 aa16.95■□□□□ 0.3
PHRF1-203ENST00000416188 WDR64B1ANS9 1081 aa16.95■□□□□ 0.3
PHRF1-203ENST00000416188 STX2P32856 288 aa16.95■□□□□ 0.3
PHRF1-203ENST00000416188 EHHADHQ08426 723 aa16.95■□□□□ 0.3
PHRF1-203ENST00000416188 ALX1Q15699 326 aa16.95■□□□□ 0.3
PHRF1-203ENST00000416188 C11orf57Q6ZUT1 292 aaPredicted RBP16.95■□□□□ 0.3
PHRF1-203ENST00000416188 PALM2Q8IXS6 379 aa16.95■□□□□ 0.3
PHRF1-203ENST00000416188 ADGRF4Q8IZF3 695 aa16.95■□□□□ 0.3
PHRF1-203ENST00000416188 LARGE1O95461 756 aa16.95■□□□□ 0.3
PHRF1-203ENST00000416188 PCK1P35558 622 aa16.95■□□□□ 0.3
PHRF1-203ENST00000416188 ANKRD20A3Q5VUR7 823 aa16.95■□□□□ 0.3
PHRF1-203ENST00000416188 TWF2Q6IBS0 349 aaKnown RBP16.95■□□□□ 0.3
PHRF1-203ENST00000416188 POTEDQ86YR6 584 aa16.95■□□□□ 0.3
PHRF1-203ENST00000416188 RIC8AQ9NPQ8 531 aa16.95■□□□□ 0.3
PHRF1-203ENST00000416188 KDM6AO15550 1401 aaPredicted RBP16.95■□□□□ 0.3
PHRF1-203ENST00000416188 EFCAB8A8MWE9 144 aa16.95■□□□□ 0.3
PHRF1-203ENST00000416188 TXNP10599 105 aaKnown RBP16.95■□□□□ 0.3
PHRF1-203ENST00000416188 NR2F2P24468 414 aa16.95■□□□□ 0.3
PHRF1-203ENST00000416188 MKRN1Q9UHC7 482 aaKnown RBP16.95■□□□□ 0.3
PHRF1-203ENST00000416188 HDLBPQ00341 1268 aaKnown RBP16.94■□□□□ 0.3
PHRF1-203ENST00000416188 KRT81Q14533 505 aa16.94■□□□□ 0.3
PHRF1-203ENST00000416188 RSRC2Q7L4I2 434 aaKnown RBP16.94■□□□□ 0.3
PHRF1-203ENST00000416188 OR6J1Q8NGC5 347 aa16.94■□□□□ 0.3
PHRF1-203ENST00000416188 MAGEF1Q9HAY2 307 aa16.94■□□□□ 0.3
PHRF1-203ENST00000416188 ABCD1P33897 745 aa16.94■□□□□ 0.3
PHRF1-203ENST00000416188 KRT76Q01546 638 aa16.94■□□□□ 0.3
PHRF1-203ENST00000416188 TAB3Q8N5C8 712 aaPredicted RBP16.94■□□□□ 0.3
PHRF1-203ENST00000416188 K7ERI5 159 aa16.94■□□□□ 0.3
PHRF1-203ENST00000416188 HADHQ16836 314 aaKnown RBP16.94■□□□□ 0.3
PHRF1-203ENST00000416188 ZKSCAN4Q969J2 545 aaPredicted RBP16.94■□□□□ 0.3
PHRF1-203ENST00000416188 KRT12Q99456 494 aa16.94■□□□□ 0.3
PHRF1-203ENST00000416188 RCOR1Q9UKL0 485 aa16.94■□□□□ 0.3
PHRF1-203ENST00000416188 AFG3L2Q9Y4W6 797 aa16.94■□□□□ 0.3
PHRF1-203ENST00000416188 SLC12A2P55011 1212 aa16.94■□□□□ 0.3
PHRF1-203ENST00000416188 DYNC1LI2O43237 492 aaPredicted RBP16.93■□□□□ 0.3
PHRF1-203ENST00000416188 ARHGAP25P42331 645 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 ATP1A2P50993 1020 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 GRM4Q14833 912 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 ILDR1Q86SU0 546 aaPredicted RBP16.93■□□□□ 0.3
PHRF1-203ENST00000416188 MB21D1Q8N884 522 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 PRMT6Q96LA8 375 aaPredicted RBP16.93■□□□□ 0.3
PHRF1-203ENST00000416188 AIFM3Q96NN9 605 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 PPP1R12CQ9BZL4 782 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 CUEDC2Q9H467 287 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 ZNF302Q9NR11 478 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 SH3GLB2Q9NR46 395 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 DISC1Q9NRI5 854 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 IQGAP1P46940 1657 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 ENC1O14682 589 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 SCYL3Q8IZE3 742 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 POLIQ9UNA4 740 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 ORC4O43929 436 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 NOL3O60936 208 aaKnown RBP16.93■□□□□ 0.3
PHRF1-203ENST00000416188 PPFIA4O75335 1185 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 CACNA2D3Q8IZS8 1091 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 STAM2O75886 525 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 TFRCP02786 760 aaKnown RBP16.93■□□□□ 0.3
PHRF1-203ENST00000416188 KLRK1P26718 216 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 PPP2R5EQ16537 467 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 CYB5R4Q7L1T6 521 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 AFAP1L2Q8N4X5 818 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 P3H4Q92791 437 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 STK25O00506 426 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 NDUFB10O96000 172 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 NECTIN1Q15223 517 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 RILPQ96NA2 401 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 VCPKMTQ9H867 229 aa16.93■□□□□ 0.3
PHRF1-203ENST00000416188 BCL9O00512 1426 aa16.92■□□□□ 0.3
PHRF1-203ENST00000416188 RNF40O75150 1001 aa16.92■□□□□ 0.3
PHRF1-203ENST00000416188 SLFN14P0C7P3 912 aa16.92■□□□□ 0.3
PHRF1-203ENST00000416188 NSFP46459 744 aaKnown RBP16.92■□□□□ 0.3
PHRF1-203ENST00000416188 GNGT1P63211 74 aa16.92■□□□□ 0.3
PHRF1-203ENST00000416188 PTPREP23469 700 aa16.92■□□□□ 0.3
PHRF1-203ENST00000416188 ERO1BQ86YB8 467 aa16.92■□□□□ 0.3
PHRF1-203ENST00000416188 SLC35F6Q8N357 371 aa16.92■□□□□ 0.3
PHRF1-203ENST00000416188 ATP2A3Q93084 1043 aa16.92■□□□□ 0.3
PHRF1-203ENST00000416188 P2RX5Q93086 422 aa16.92■□□□□ 0.3
PHRF1-203ENST00000416188 MTMR4Q9NYA4 1195 aa16.92■□□□□ 0.3
PHRF1-203ENST00000416188 SLC25A27O95847 323 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms