RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 ANKRD7Q92527 254 aa16.27■□□□□ 0.2
SGCE-202ENST00000415788 DEFB118Q96PH6 123 aa16.27■□□□□ 0.2
SGCE-202ENST00000415788 UIMC1Q96RL1 719 aa16.27■□□□□ 0.2
SGCE-202ENST00000415788 RCOR1Q9UKL0 485 aa16.27■□□□□ 0.2
SGCE-202ENST00000415788 STK24Q9Y6E0 443 aa16.27■□□□□ 0.2
SGCE-202ENST00000415788 CTIFO43310 598 aaKnown RBP16.27■□□□□ 0.19
SGCE-202ENST00000415788 KPNA6O60684 536 aa16.27■□□□□ 0.19
SGCE-202ENST00000415788 PPFIA4O75335 1185 aa16.27■□□□□ 0.19
SGCE-202ENST00000415788 CCNE2O96020 404 aa16.27■□□□□ 0.19
SGCE-202ENST00000415788 MYCP01106 439 aaPredicted RBP16.27■□□□□ 0.19
SGCE-202ENST00000415788 C6orf222P0C671 652 aaPredicted RBP16.27■□□□□ 0.19
SGCE-202ENST00000415788 HOXD8P13378 290 aaPredicted RBP16.27■□□□□ 0.19
SGCE-202ENST00000415788 TECP42680 631 aa16.27■□□□□ 0.19
SGCE-202ENST00000415788 ACTR2P61160 394 aa16.27■□□□□ 0.19
SGCE-202ENST00000415788 SPIRE1Q08AE8 756 aa16.27■□□□□ 0.19
SGCE-202ENST00000415788 FSCN1Q16658 493 aaKnown RBP16.27■□□□□ 0.19
SGCE-202ENST00000415788 DGKDQ16760 1214 aa16.27■□□□□ 0.19
SGCE-202ENST00000415788 MIS18BP1Q6P0N0 1132 aa16.27■□□□□ 0.19
SGCE-202ENST00000415788 SPATA32Q96LK8 384 aa16.27■□□□□ 0.19
SGCE-202ENST00000415788 AK8Q96MA6 479 aa16.27■□□□□ 0.19
SGCE-202ENST00000415788 GPR20Q99678 358 aa16.27■□□□□ 0.19
SGCE-202ENST00000415788 TMEM106CQ9BVX2 250 aa16.27■□□□□ 0.19
SGCE-202ENST00000415788 UNC45AQ9H3U1 944 aa16.27■□□□□ 0.19
SGCE-202ENST00000415788 BCAS3Q9H6U6 928 aa16.27■□□□□ 0.19
SGCE-202ENST00000415788 SRPRBQ9Y5M8 271 aaKnown RBP16.27■□□□□ 0.19
SGCE-202ENST00000415788 ATG7O95352 703 aa16.26■□□□□ 0.19
SGCE-202ENST00000415788 PGK1P00558 417 aa16.26■□□□□ 0.19
SGCE-202ENST00000415788 MMP3P08254 477 aa16.26■□□□□ 0.19
SGCE-202ENST00000415788 SP4Q02446 784 aa16.26■□□□□ 0.19
SGCE-202ENST00000415788 MIER3Q7Z3K6 550 aa16.26■□□□□ 0.19
SGCE-202ENST00000415788 IGSF22Q8N9C0 903 aa16.26■□□□□ 0.19
SGCE-202ENST00000415788 KRI1Q8N9T8 703 aaKnown RBP16.26■□□□□ 0.19
SGCE-202ENST00000415788 PCSK9Q8NBP7 692 aaKnown RBP16.26■□□□□ 0.19
SGCE-202ENST00000415788 ARID3AQ99856 593 aa16.26■□□□□ 0.19
SGCE-202ENST00000415788 DISC1Q9NRI5 854 aa16.26■□□□□ 0.19
SGCE-202ENST00000415788 PCDHA10Q9Y5I2 948 aa16.26■□□□□ 0.19
SGCE-202ENST00000415788 VWA3AA6NCI4 1184 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 CHMP2AO43633 222 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 SORBS3O60504 671 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 SGPL1O95470 568 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 PSAPP07602 524 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 PTGS1P23219 599 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 MARCKSP29966 332 aaPredicted RBP16.25■□□□□ 0.19
SGCE-202ENST00000415788 LONP1P36776 959 aaKnown RBP16.25■□□□□ 0.19
SGCE-202ENST00000415788 GNASQ5JWF2 1037 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 KLHDC9Q8NEP7 349 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 ERMNQ8TAM6 284 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 U2AF1L4Q8WU68 220 aaKnown RBP16.25■□□□□ 0.19
SGCE-202ENST00000415788 CRISPLD2Q9H0B8 497 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 FBXO2Q9UK22 296 aaPredicted RBP16.25■□□□□ 0.19
SGCE-202ENST00000415788 OGDHLQ9ULD0 1010 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 SAMM50Q9Y512 469 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 POTEFA5A3E0 1075 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 CTAGE5O15320 804 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 TCF7P36402 384 aaPredicted RBP16.25■□□□□ 0.19
SGCE-202ENST00000415788 GJA8P48165 433 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 EPHA7Q15375 998 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 COL13A1Q5TAT6 717 aaPredicted RBP16.25■□□□□ 0.19
SGCE-202ENST00000415788 NCAPH2Q6IBW4 605 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 ABHD15Q6UXT9 468 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 FAM200AQ8TCP9 573 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 NEK9Q8TD19 979 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 LEO1Q8WVC0 666 aaPredicted RBP16.25■□□□□ 0.19
SGCE-202ENST00000415788 TSEN34Q9BSV6 310 aaKnown RBP16.25■□□□□ 0.19
SGCE-202ENST00000415788 KCNF1Q9H3M0 494 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 LRWD1Q9UFC0 647 aa16.25■□□□□ 0.19
SGCE-202ENST00000415788 MYH15Q9Y2K3 1946 aa16.24■□□□□ 0.19
SGCE-202ENST00000415788 EMSYQ7Z589 1322 aa16.24■□□□□ 0.19
SGCE-202ENST00000415788 GSTTP1A0A1W2PQM5 241 aa16.24■□□□□ 0.19
SGCE-202ENST00000415788 POTEMA6NI47 508 aa16.24■□□□□ 0.19
SGCE-202ENST00000415788 SUPT20HL2P0C7V6 817 aa16.24■□□□□ 0.19
SGCE-202ENST00000415788 LRRC41Q15345 812 aa16.24■□□□□ 0.19
SGCE-202ENST00000415788 IL17AQ16552 155 aa16.24■□□□□ 0.19
SGCE-202ENST00000415788 HAUS3Q68CZ6 603 aa16.24■□□□□ 0.19
SGCE-202ENST00000415788 AZI2Q9H6S1 392 aa16.24■□□□□ 0.19
SGCE-202ENST00000415788 IGKV6D-21A0A0A0MT36 114 aa16.23■□□□□ 0.19
SGCE-202ENST00000415788 MOXD2PA6NHM9 499 aa16.23■□□□□ 0.19
SGCE-202ENST00000415788 DNM1LO00429 736 aa16.23■□□□□ 0.19
SGCE-202ENST00000415788 RIOK3O14730 519 aaKnown RBP16.23■□□□□ 0.19
SGCE-202ENST00000415788 SLC26A2P50443 739 aa16.23■□□□□ 0.19
SGCE-202ENST00000415788 FAM160B1Q5W0V3 765 aa16.23■□□□□ 0.19
SGCE-202ENST00000415788 C17orf53Q8N3J3 647 aaPredicted RBP16.23■□□□□ 0.19
SGCE-202ENST00000415788 ZNF579Q8NAF0 562 aaKnown RBP16.23■□□□□ 0.19
SGCE-202ENST00000415788 MYADML2A6NDP7 307 aa16.22■□□□□ 0.19
SGCE-202ENST00000415788 KBTBD13C9JR72 458 aa16.22■□□□□ 0.19
SGCE-202ENST00000415788 EML1O00423 815 aa16.22■□□□□ 0.19
SGCE-202ENST00000415788 BACH1O14867 736 aa16.22■□□□□ 0.19
SGCE-202ENST00000415788 SLC26A4O43511 780 aa16.22■□□□□ 0.19
SGCE-202ENST00000415788 DKC1O60832 514 aaKnown RBP eCLIP16.22■□□□□ 0.19
SGCE-202ENST00000415788 CUTAO60888 179 aa16.22■□□□□ 0.19
SGCE-202ENST00000415788 LGR5O75473 907 aa16.22■□□□□ 0.19
SGCE-202ENST00000415788 TFRCP02786 760 aaKnown RBP16.22■□□□□ 0.19
SGCE-202ENST00000415788 ME1P48163 572 aa16.22■□□□□ 0.19
SGCE-202ENST00000415788 CBX1P83916 185 aa16.22■□□□□ 0.19
SGCE-202ENST00000415788 BEX3Q00994 111 aa16.22■□□□□ 0.19
SGCE-202ENST00000415788 KRT79Q5XKE5 535 aa16.22■□□□□ 0.19
SGCE-202ENST00000415788 CCSAPQ6IQ19 270 aaPredicted RBP16.22■□□□□ 0.19
SGCE-202ENST00000415788 PLPPR4Q7Z2D5 763 aa16.22■□□□□ 0.19
SGCE-202ENST00000415788 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.22■□□□□ 0.19
SGCE-202ENST00000415788 ANKLE1Q8NAG6 615 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms