RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 PPP4R3CPQ6ZMV5 832 aa19.74■□□□□ 0.75
SCARB1-203ENST00000415380 RPGRQ92834 1020 aaKnown RBP19.74■□□□□ 0.75
SCARB1-203ENST00000415380 PLAAQ9Y263 795 aa19.74■□□□□ 0.75
SCARB1-203ENST00000415380 MED24O75448 989 aa19.73■□□□□ 0.75
SCARB1-203ENST00000415380 INPP5BP32019 993 aa19.73■□□□□ 0.75
SCARB1-203ENST00000415380 RFC4P35249 363 aa19.73■□□□□ 0.75
SCARB1-203ENST00000415380 CASP5P51878 434 aa19.73■□□□□ 0.75
SCARB1-203ENST00000415380 C10orf76Q5T2E6 689 aa19.73■□□□□ 0.75
SCARB1-203ENST00000415380 KCTD1Q719H9 257 aa19.73■□□□□ 0.75
SCARB1-203ENST00000415380 B4GALNT4Q76KP1 1039 aa19.73■□□□□ 0.75
SCARB1-203ENST00000415380 DNAAF5Q86Y56 855 aa19.73■□□□□ 0.75
SCARB1-203ENST00000415380 ISCUQ9H1K1 167 aa19.73■□□□□ 0.75
SCARB1-203ENST00000415380 ARFGEF1Q9Y6D6 1849 aa19.73■□□□□ 0.75
SCARB1-203ENST00000415380 USP11P51784 963 aa19.73■□□□□ 0.75
SCARB1-203ENST00000415380 SLC12A3P55017 1021 aa19.73■□□□□ 0.75
SCARB1-203ENST00000415380 EPN3Q9H201 632 aa19.73■□□□□ 0.75
SCARB1-203ENST00000415380 USP17L15C9J2P7 530 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 USP17L13C9JLJ4 530 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 USP17L11C9JVI0 530 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 USP17L18D6R9N7 530 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 USP17L22D6RA61 530 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 USP17L17D6RBQ6 530 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 USP17L19D6RCP7 530 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 USP17L20D6RJB6 530 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 ECHS1P30084 290 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 USP17L24Q0WX57 530 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 USP17L6PQ6QN14 398 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 MAATS1Q7Z4T9 603 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 C1orf131Q8NDD1 294 aaKnown RBP19.72■□□□□ 0.75
SCARB1-203ENST00000415380 SCFD2Q8WU76 684 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 TBC1D22AQ8WUA7 517 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 SPAG5Q96R06 1193 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 NAP1L4Q99733 375 aaKnown RBP19.72■□□□□ 0.75
SCARB1-203ENST00000415380 KCNMB3Q9NPA1 279 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 FOCADQ5VW36 1801 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 POTEFA5A3E0 1075 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 POTEIP0CG38 1075 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 UCHL3P15374 230 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 HLTFQ14527 1009 aaKnown RBP eCLIP19.72■□□□□ 0.75
SCARB1-203ENST00000415380 PTPROQ16827 1216 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 POTEGQ6S5H5 508 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 POTEEQ6S8J3 1075 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 LRRC57Q8N9N7 239 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 PBKQ96KB5 322 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 DHX36Q9H2U1 1008 aaKnown RBP19.72■□□□□ 0.75
SCARB1-203ENST00000415380 PLCB1Q9NQ66 1216 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 DDX4Q9NQI0 724 aaKnown RBP19.72■□□□□ 0.75
SCARB1-203ENST00000415380 SWAP70Q9UH65 585 aa19.72■□□□□ 0.75
SCARB1-203ENST00000415380 HMGB1P1B2RPK0 211 aaPredicted RBP19.71■□□□□ 0.75
SCARB1-203ENST00000415380 CEP104O60308 925 aa19.71■□□□□ 0.75
SCARB1-203ENST00000415380 CEP85LQ5SZL2 805 aa19.71■□□□□ 0.75
SCARB1-203ENST00000415380 ARMCX3Q9UH62 379 aaPredicted RBP19.71■□□□□ 0.75
SCARB1-203ENST00000415380 NAGPAQ9UK23 515 aa19.71■□□□□ 0.75
SCARB1-203ENST00000415380 PITPNM2Q9BZ72 1349 aa19.71■□□□□ 0.75
SCARB1-203ENST00000415380 PPP1R37O75864 691 aa19.71■□□□□ 0.75
SCARB1-203ENST00000415380 ITGB3BPQ13352 177 aaPredicted RBP19.71■□□□□ 0.75
SCARB1-203ENST00000415380 PTGISQ16647 500 aa19.71■□□□□ 0.75
SCARB1-203ENST00000415380 GPATCH4Q5T3I0 446 aaKnown RBP19.71■□□□□ 0.75
SCARB1-203ENST00000415380 MMS22LQ6ZRQ5 1243 aa19.71■□□□□ 0.75
SCARB1-203ENST00000415380 FRMD5Q7Z6J6 570 aa19.71■□□□□ 0.75
SCARB1-203ENST00000415380 ACTRT1Q8TDG2 376 aa19.71■□□□□ 0.75
SCARB1-203ENST00000415380 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.71■□□□□ 0.751e-10■■■■■ 60.3
SCARB1-203ENST00000415380 ATXN2Q99700 1313 aaKnown RBP19.71■□□□□ 0.75
SCARB1-203ENST00000415380 AFPP02771 609 aaKnown RBP19.7■□□□□ 0.74
SCARB1-203ENST00000415380 PON1P27169 355 aa19.7■□□□□ 0.74
SCARB1-203ENST00000415380 NAA35Q5VZE5 725 aa19.7■□□□□ 0.74
SCARB1-203ENST00000415380 PRR5LQ6MZQ0 368 aa19.7■□□□□ 0.74
SCARB1-203ENST00000415380 RBM46Q8TBY0 533 aaKnown RBP19.7■□□□□ 0.74
SCARB1-203ENST00000415380 TMBIM4Q9HC24 238 aa19.7■□□□□ 0.74
SCARB1-203ENST00000415380 POLLQ9UGP5 575 aa19.7■□□□□ 0.74
SCARB1-203ENST00000415380 TRAF3IP3Q9Y228 551 aa19.7■□□□□ 0.74
SCARB1-203ENST00000415380 BZW2Q9Y6E2 419 aaKnown RBP19.7■□□□□ 0.74
SCARB1-203ENST00000415380 HSD17B3P37058 310 aa19.7■□□□□ 0.74
SCARB1-203ENST00000415380 MDH1P40925 334 aaKnown RBP19.7■□□□□ 0.74
SCARB1-203ENST00000415380 GTF2A1P52655 376 aaPredicted RBP19.7■□□□□ 0.74
SCARB1-203ENST00000415380 IFI16Q16666 785 aaKnown RBP19.7■□□□□ 0.74
SCARB1-203ENST00000415380 ALKBH5Q6P6C2 394 aaKnown RBP19.7■□□□□ 0.74
SCARB1-203ENST00000415380 EIF1ADQ8N9N8 165 aaKnown RBP19.7■□□□□ 0.74
SCARB1-203ENST00000415380 PROCA1Q8NCQ7 364 aaPredicted RBP19.7■□□□□ 0.74
SCARB1-203ENST00000415380 AP1M1Q9BXS5 423 aa19.7■□□□□ 0.74
SCARB1-203ENST00000415380 SLC26A4O43511 780 aa19.69■□□□□ 0.74
SCARB1-203ENST00000415380 ZBTB48P10074 688 aaPredicted RBP19.69■□□□□ 0.74
SCARB1-203ENST00000415380 HOXD13P35453 343 aa19.69■□□□□ 0.74
SCARB1-203ENST00000415380 CUL1Q13616 776 aa19.69■□□□□ 0.74
SCARB1-203ENST00000415380 GIT2Q14161 759 aa19.69■□□□□ 0.74
SCARB1-203ENST00000415380 EXOC3L4Q17RC7 722 aa19.69■□□□□ 0.74
SCARB1-203ENST00000415380 TRAPPC3LQ5T215 181 aa19.69■□□□□ 0.74
SCARB1-203ENST00000415380 DDX42Q86XP3 938 aaKnown RBP eCLIP19.69■□□□□ 0.748e-9■□□□□ 10.6
SCARB1-203ENST00000415380 SUGP1Q8IWZ8 645 aaKnown RBP19.69■□□□□ 0.74
SCARB1-203ENST00000415380 ZNF473Q8WTR7 871 aaKnown RBP19.69■□□□□ 0.74
SCARB1-203ENST00000415380 SERPINB13Q9UIV8 391 aa19.69■□□□□ 0.74
SCARB1-203ENST00000415380 MYH4Q9Y623 1939 aa19.69■□□□□ 0.74
SCARB1-203ENST00000415380 SHMT1P34896 483 aa19.69■□□□□ 0.74
SCARB1-203ENST00000415380 PSMC6P62333 389 aa19.69■□□□□ 0.74
SCARB1-203ENST00000415380 KNOP1Q1ED39 458 aaKnown RBP19.69■□□□□ 0.74
SCARB1-203ENST00000415380 FBXW10Q5XX13 1052 aa19.69■□□□□ 0.74
SCARB1-203ENST00000415380 LRIG3Q6UXM1 1119 aa19.69■□□□□ 0.74
SCARB1-203ENST00000415380 CATSPER3Q86XQ3 398 aa19.69■□□□□ 0.74
SCARB1-203ENST00000415380 SPATS2Q86XZ4 545 aaKnown RBP19.69■□□□□ 0.74
SCARB1-203ENST00000415380 TBC1D16Q8TBP0 767 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms