RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 HMGB1P09429 215 aaKnown RBP15.61■□□□□ 0.09
RAPGEF1-204ENST00000414781 SMIM10L2AP0DMW4 78 aa15.61■□□□□ 0.09
RAPGEF1-204ENST00000414781 SMIM10L2BP0DMW5 78 aa15.61■□□□□ 0.09
RAPGEF1-204ENST00000414781 HOXB8P17481 243 aaPredicted RBP15.61■□□□□ 0.09
RAPGEF1-204ENST00000414781 NOVP48745 357 aa15.61■□□□□ 0.09
RAPGEF1-204ENST00000414781 DUSP6Q16828 381 aa15.61■□□□□ 0.09
RAPGEF1-204ENST00000414781 ST3GAL2Q16842 350 aa15.61■□□□□ 0.09
RAPGEF1-204ENST00000414781 PDE12Q6L8Q7 609 aaKnown RBP15.61■□□□□ 0.09
RAPGEF1-204ENST00000414781 KCNV1Q6PIU1 500 aa15.61■□□□□ 0.09
RAPGEF1-204ENST00000414781 SPATA33Q96N06 139 aa15.61■□□□□ 0.09
RAPGEF1-204ENST00000414781 NECTIN4Q96NY8 510 aa15.61■□□□□ 0.09
RAPGEF1-204ENST00000414781 RMDN3Q96TC7 470 aa15.61■□□□□ 0.09
RAPGEF1-204ENST00000414781 C16orf70Q9BSU1 422 aa15.61■□□□□ 0.09
RAPGEF1-204ENST00000414781 OSBPL7Q9BZF2 842 aa15.61■□□□□ 0.09
RAPGEF1-204ENST00000414781 S1PR5Q9H228 398 aa15.61■□□□□ 0.09
RAPGEF1-204ENST00000414781 MYH7P12883 1935 aa15.6■□□□□ 0.09
RAPGEF1-204ENST00000414781 PKD1L2Q7Z442 2459 aa15.6■□□□□ 0.09
RAPGEF1-204ENST00000414781 H3BRB1 525 aa15.6■□□□□ 0.09
RAPGEF1-204ENST00000414781 ENPP3O14638 875 aa15.6■□□□□ 0.09
RAPGEF1-204ENST00000414781 AOC1P19801 751 aa15.6■□□□□ 0.09
RAPGEF1-204ENST00000414781 SDHBP21912 280 aa15.6■□□□□ 0.09
RAPGEF1-204ENST00000414781 MYSM1Q5VVJ2 828 aa15.6■□□□□ 0.09
RAPGEF1-204ENST00000414781 ANKRD54Q6NXT1 300 aa15.6■□□□□ 0.09
RAPGEF1-204ENST00000414781 MFSD6Q6ZSS7 791 aa15.6■□□□□ 0.09
RAPGEF1-204ENST00000414781 VN1R2Q8NFZ6 395 aa15.6■□□□□ 0.09
RAPGEF1-204ENST00000414781 MICAL1Q8TDZ2 1067 aa15.6■□□□□ 0.09
RAPGEF1-204ENST00000414781 RTP3Q9BQQ7 232 aa15.6■□□□□ 0.09
RAPGEF1-204ENST00000414781 TM6SF1Q9BZW5 370 aa15.6■□□□□ 0.09
RAPGEF1-204ENST00000414781 KRT23Q9C075 422 aa15.6■□□□□ 0.09
RAPGEF1-204ENST00000414781 TUT1Q9H6E5 874 aaKnown RBP15.6■□□□□ 0.09
RAPGEF1-204ENST00000414781 CNNM2Q9H8M5 875 aa15.6■□□□□ 0.09
RAPGEF1-204ENST00000414781 TSHZ2Q9NRE2 1034 aa15.6■□□□□ 0.09
RAPGEF1-204ENST00000414781 IL17RBQ9NRM6 502 aa15.6■□□□□ 0.09
RAPGEF1-204ENST00000414781 CELF3Q5SZQ8 465 aaKnown RBP15.59■□□□□ 0.09
RAPGEF1-204ENST00000414781 MCF2L2Q86YR7 1114 aa15.59■□□□□ 0.09
RAPGEF1-204ENST00000414781 RASGRP4Q8TDF6 673 aa15.59■□□□□ 0.09
RAPGEF1-204ENST00000414781 SYTL5Q8TDW5 730 aaPredicted RBP15.59■□□□□ 0.09
RAPGEF1-204ENST00000414781 TAAR1Q96RJ0 339 aa15.59■□□□□ 0.09
RAPGEF1-204ENST00000414781 HINFPQ9BQA5 517 aa15.59■□□□□ 0.09
RAPGEF1-204ENST00000414781 GPCPD1Q9NPB8 672 aa15.59■□□□□ 0.09
RAPGEF1-204ENST00000414781 SNX14Q9Y5W7 946 aa15.59■□□□□ 0.09
RAPGEF1-204ENST00000414781 PER2O15055 1255 aa15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 NMT2O60551 498 aa15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 TOP1P11387 765 aaKnown RBP15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 SP100P23497 879 aaPredicted RBP15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 TECP42680 631 aa15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 HAND2P61296 217 aa15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 HSDL1Q3SXM5 330 aa15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 ARHGEF16Q5VV41 709 aa15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 CWF19L1Q69YN2 538 aaKnown RBP15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 ZC3H14Q6PJT7 736 aaKnown RBP15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 RALYLQ86SE5 291 aaKnown RBP15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 NPAS4Q8IUM7 802 aa15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 DTWD2Q8NBA8 298 aa15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 FLCNQ8NFG4 579 aa15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 NCOA7Q8NI08 942 aa15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 RUBCNQ92622 972 aa15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 RNPEPQ9H4A4 650 aa15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 EHMT1Q9H9B1 1298 aa15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 FRMPD2Q68DX3 1309 aaPredicted RBP15.58■□□□□ 0.08
RAPGEF1-204ENST00000414781 E7EWF7 191 aa15.57■□□□□ 0.08
RAPGEF1-204ENST00000414781 STAG3L1P0CL83 205 aa15.57■□□□□ 0.08
RAPGEF1-204ENST00000414781 GHRP10912 638 aa15.57■□□□□ 0.08
RAPGEF1-204ENST00000414781 RABEP1Q15276 862 aa15.57■□□□□ 0.08
RAPGEF1-204ENST00000414781 USH1GQ495M9 461 aa15.57■□□□□ 0.08
RAPGEF1-204ENST00000414781 SYCE2Q6PIF2 218 aa15.57■□□□□ 0.08
RAPGEF1-204ENST00000414781 RASEFQ8IZ41 740 aa15.57■□□□□ 0.08
RAPGEF1-204ENST00000414781 CYP2W1Q8TAV3 490 aa15.57■□□□□ 0.08
RAPGEF1-204ENST00000414781 AAASQ9NRG9 546 aa15.57■□□□□ 0.08
RAPGEF1-204ENST00000414781 PCDHB12Q9Y5F1 795 aa15.57■□□□□ 0.08
RAPGEF1-204ENST00000414781 ABCB11O95342 1321 aa15.57■□□□□ 0.08
RAPGEF1-204ENST00000414781 OTOGLQ3ZCN5 2332 aa15.57■□□□□ 0.08
RAPGEF1-204ENST00000414781 C2CD4DB7Z1M9 353 aa15.56■□□□□ 0.08
RAPGEF1-204ENST00000414781 GGPS1O95749 300 aa15.56■□□□□ 0.08
RAPGEF1-204ENST00000414781 NR3C2P08235 984 aa15.56■□□□□ 0.08
RAPGEF1-204ENST00000414781 FGRP09769 529 aa15.56■□□□□ 0.08
RAPGEF1-204ENST00000414781 TGFB3P10600 412 aa15.56■□□□□ 0.08
RAPGEF1-204ENST00000414781 RBM10P98175 930 aaKnown RBP15.56■□□□□ 0.08
RAPGEF1-204ENST00000414781 KCNC3Q14003 757 aa15.56■□□□□ 0.08
RAPGEF1-204ENST00000414781 TPRNQ4KMQ1 711 aa15.56■□□□□ 0.08
RAPGEF1-204ENST00000414781 CES5AQ6NT32 575 aa15.56■□□□□ 0.08
RAPGEF1-204ENST00000414781 TAF2Q6P1X5 1199 aa15.56■□□□□ 0.08
RAPGEF1-204ENST00000414781 BLOC1S2Q6QNY1 142 aa15.56■□□□□ 0.08
RAPGEF1-204ENST00000414781 RSPH3Q86UC2 560 aa15.56■□□□□ 0.08
RAPGEF1-204ENST00000414781 ZDHHC14Q8IZN3 488 aa15.56■□□□□ 0.08
RAPGEF1-204ENST00000414781 ESR2Q92731 530 aa15.56■□□□□ 0.08
RAPGEF1-204ENST00000414781 JAKMIP1Q96N16 626 aaKnown RBP15.56■□□□□ 0.08
RAPGEF1-204ENST00000414781 FTHL17Q9BXU8 183 aa15.56■□□□□ 0.08
RAPGEF1-204ENST00000414781 TOMM22Q9NS69 142 aa15.56■□□□□ 0.08
RAPGEF1-204ENST00000414781 COL20A1Q9P218 1284 aa15.56■□□□□ 0.08
RAPGEF1-204ENST00000414781 CYP46A1Q9Y6A2 500 aa15.56■□□□□ 0.08
RAPGEF1-204ENST00000414781 MAP1BP46821 2468 aaKnown RBP15.55■□□□□ 0.08
RAPGEF1-204ENST00000414781 SPTBN2O15020 2390 aa15.55■□□□□ 0.08
RAPGEF1-204ENST00000414781 ORC4O43929 436 aa15.55■□□□□ 0.08
RAPGEF1-204ENST00000414781 RANBP6O60518 1105 aaKnown RBP15.55■□□□□ 0.08
RAPGEF1-204ENST00000414781 CHRNA1P02708 482 aa15.55■□□□□ 0.08
RAPGEF1-204ENST00000414781 LGALS2P05162 132 aa15.55■□□□□ 0.08
RAPGEF1-204ENST00000414781 PDHBP11177 359 aa15.55■□□□□ 0.08
RAPGEF1-204ENST00000414781 EIF2AK2P19525 551 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms