RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 FKTNO75072 461 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 B3GALT4O96024 378 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 CPB1P15086 417 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 GUCY1A2P33402 732 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 MCM4P33991 863 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 PCBP4P57723 403 aaKnown RBP5.78□□□□□ -1.48
VPS41-205ENST00000414632 HAND2P61296 217 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 TCEAL1Q15170 157 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 MCMDC2Q4G0Z9 681 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 C16orf86Q6ZW13 317 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 CENPQQ7L2Z9 268 aaPredicted RBP5.78□□□□□ -1.48
VPS41-205ENST00000414632 VN1R5Q7Z5H4 357 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 ANKRD23Q86SG2 305 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 MICALL1Q8N3F8 863 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 PLD4Q96BZ4 506 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 CHMP4CQ96CF2 233 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 LRRC3Q9BY71 257 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 ARHGAP39Q9C0H5 1083 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 MCOLN1Q9GZU1 580 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 IL25Q9H293 177 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 AS3MTQ9HBK9 375 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 SENP2Q9HC62 589 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 CABP5Q9NP86 173 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 HELLSQ9NRZ9 838 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 CYP8B1Q9UNU6 501 aa5.78□□□□□ -1.48
VPS41-205ENST00000414632 CCDC171Q6TFL3 1326 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 A0A1W2PRG0 241 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 SIN3BO75182 1162 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 CILPO75339 1184 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 GNAT2P19087 354 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 NME2P22392 152 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 ARNTP27540 789 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 CTGFP29279 349 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 BACE1P56817 501 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 SP3Q02447 781 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 PPARAQ07869 468 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 SEPT6Q14141 434 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 LRRC14Q15048 493 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 SBK1Q52WX2 424 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 FAM47AQ5JRC9 791 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 KIAA1755Q5JYT7 1200 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 ZNF468Q5VIY5 522 aaPredicted RBP5.77□□□□□ -1.49
VPS41-205ENST00000414632 FBXW10Q5XX13 1052 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 ADAMTSL4Q6UY14 1074 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 FASTKD5Q7L8L6 764 aaKnown RBP5.77□□□□□ -1.49
VPS41-205ENST00000414632 VWA5B2Q8N398 1253 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 GRIN3AQ8TCU5 1115 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 STK35Q8TDR2 534 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 SMCR8Q8TEV9 937 aaPredicted RBP5.77□□□□□ -1.49
VPS41-205ENST00000414632 KIFC2Q96AC6 838 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 PARK7Q99497 189 aaKnown RBP5.77□□□□□ -1.49
VPS41-205ENST00000414632 WDR18Q9BV38 432 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 NACAP1Q9BZK3 213 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 MKNK2Q9HBH9 465 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 TMOD4Q9NZQ9 345 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 SWAP70Q9UH65 585 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 SOX13Q9UN79 622 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 AGTPBP1Q9UPW5 1226 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 TRIM17Q9Y577 477 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 TACC3Q9Y6A5 838 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 ROBO3Q96MS0 1386 aa5.77□□□□□ -1.49
VPS41-205ENST00000414632 ADGRA2Q96PE1 1338 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 ZNFX1Q9P2E3 1918 aaKnown RBP5.76□□□□□ -1.49
VPS41-205ENST00000414632 CDC14CA4D256 554 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 FAM221BA6H8Z2 402 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 TNRC18O15417 2968 aaPredicted RBP5.76□□□□□ -1.49
VPS41-205ENST00000414632 TLR2O60603 784 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 FGAP02671 866 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 HSPD1P10809 573 aaKnown RBP5.76□□□□□ -1.49
VPS41-205ENST00000414632 BMP4P12644 408 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 EEF2P13639 858 aaKnown RBP5.76□□□□□ -1.49
VPS41-205ENST00000414632 HSD3B2P26439 372 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 ZNF165P49910 485 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 ICA1Q05084 483 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 MPP2Q14168 576 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 RRP12Q5JTH9 1297 aaKnown RBP5.76□□□□□ -1.49
VPS41-205ENST00000414632 KANK3Q6NY19 840 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 LLGL2Q6P1M3 1020 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 C17orf99Q6UX52 265 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 TMEM179Q6ZVK1 233 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 CTU1Q7Z7A3 348 aaKnown RBP5.76□□□□□ -1.49
VPS41-205ENST00000414632 SIAH1Q8IUQ4 282 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 SULF2Q8IWU5 870 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 SPICE1Q8N0Z3 855 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 ANKRD13CQ8N6S4 541 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 FAM169BQ8N8A8 192 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 DEPDC7Q96QD5 511 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 FERD3LQ96RJ6 166 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 P2RX7Q99572 595 aaKnown RBP5.76□□□□□ -1.49
VPS41-205ENST00000414632 PAGR1Q9BTK6 254 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 LACRTQ9GZZ8 138 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 ADAM19Q9H013 955 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 ASCC2Q9H1I8 757 aaPredicted RBP5.76□□□□□ -1.49
VPS41-205ENST00000414632 RPAP3Q9H6T3 665 aaPredicted RBP5.76□□□□□ -1.49
VPS41-205ENST00000414632 CBX8Q9HC52 389 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 BRMS1Q9HCU9 246 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 SH2B1Q9NRF2 756 aaPredicted RBP5.76□□□□□ -1.49
VPS41-205ENST00000414632 TOMM22Q9NS69 142 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 SLC6A14Q9UN76 642 aa5.76□□□□□ -1.49
VPS41-205ENST00000414632 PLXNA1Q9UIW2 1896 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms