RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 NME2P22392 152 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 ARNTP27540 789 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 SERPINB3P29508 390 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 RAD52P43351 418 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 MAPK8P45983 427 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 RENBPP51606 427 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 NEK2P51955 445 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 GTF2A1P52655 376 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-203ENST00000414174 CTAG1AP78358 180 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 PDE4BQ07343 736 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 PAK2Q13177 524 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 PPP2R5CQ13362 524 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 ACAP1Q15027 740 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 MLC1Q15049 377 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 ARHGEF6Q15052 776 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 INF2Q27J81 1249 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 SHROOM1Q2M3G4 852 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-203ENST00000414174 DALRD3Q5D0E6 543 aaKnown RBP4.12□□□□□ -1.75
SF3B1-203ENST00000414174 C10orf76Q5T2E6 689 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 FAM102BQ5T8I3 360 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 TTC19Q6DKK2 380 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-203ENST00000414174 IL31Q6EBC2 164 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 GALNT17Q6IS24 598 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 TPTE2Q6XPS3 522 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 PRR23BQ6ZRT6 265 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 GALNT5Q7Z7M9 940 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 SDCCAG8Q86SQ7 713 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-203ENST00000414174 SRLQ86TD4 932 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 RNF168Q8IYW5 571 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-203ENST00000414174 RTKN2Q8IZC4 609 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 FAM181AQ8N9Y4 354 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 FBXO15Q8NCQ5 510 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-203ENST00000414174 PJA1Q8NG27 643 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 BICD2Q8TD16 824 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 ARHGEF2Q92974 986 aaKnown RBP4.12□□□□□ -1.75
SF3B1-203ENST00000414174 ISL2Q96A47 359 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 CFAP36Q96G28 342 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 DHTKD1Q96HY7 919 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-203ENST00000414174 HIC2Q96JB3 615 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 ZMAT2Q96NC0 199 aaKnown RBP4.12□□□□□ -1.75
SF3B1-203ENST00000414174 TSGA13Q96PP4 275 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 ALPK1Q96QP1 1244 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 CAMKK2Q96RR4 588 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 HAUS7Q99871 368 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 TRIM7Q9C029 511 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 ATXN3LQ9H3M9 355 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 KIAA1586Q9HCI6 787 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 KCNQ5Q9NR82 932 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 ETAA1Q9NY74 926 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 AIPL1Q9NZN9 384 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 PPARGC1AQ9UBK2 798 aaKnown RBP4.12□□□□□ -1.75
SF3B1-203ENST00000414174 FBXL5Q9UKA1 691 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 SUFUQ9UMX1 484 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 CTNND2Q9UQB3 1225 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 TRAF3IP3Q9Y228 551 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 PCDHGB7Q9Y5F8 929 aa4.12□□□□□ -1.75
SF3B1-203ENST00000414174 MORC2Q9Y6X9 1032 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-203ENST00000414174 LINC00854A0A1B0GVQ3 168 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 ANO9A1A5B4 782 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 CCDC66A2RUB6 948 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 NPIPB6E9PJ23 425 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 PLOD2O00469 737 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 CASQ2O14958 399 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-203ENST00000414174 RASA4O43374 803 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 APBB3O95704 486 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 TMEM253P0C7T8 217 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 GZMAP12544 262 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 KRT13P13646 458 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 DESP17661 470 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 CAPN3P20807 821 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 CNGA1P29973 690 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 GALNSP34059 522 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 USP8P40818 1118 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 NOP2P46087 812 aaKnown RBP4.11□□□□□ -1.75
SF3B1-203ENST00000414174 MAN2A2P49641 1150 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 MRE11P49959 708 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 RCAN1P53805 252 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 IRX1P78414 480 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-203ENST00000414174 MRPS35P82673 323 aaKnown RBP4.11□□□□□ -1.75
SF3B1-203ENST00000414174 PTPN11Q06124 597 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-203ENST00000414174 PPP2R3AQ06190 1150 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 PDIA5Q14554 519 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 RASA2Q15283 850 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 TAF1CQ15572 869 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-203ENST00000414174 ELF2Q15723 593 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 KCNA10Q16322 511 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 GFOD2Q3B7J2 385 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 NBPF8Q3BBV2 869 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 INTS11Q5TA45 600 aaKnown RBP4.11□□□□□ -1.75
SF3B1-203ENST00000414174 MAP1SQ66K74 1059 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-203ENST00000414174 CIAPIN1Q6FI81 312 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 FAM196AQ6ZSG2 479 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 FAM214BQ7L5A3 538 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 EEPD1Q7L9B9 569 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 SMYD4Q8IYR2 804 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-203ENST00000414174 CCAR2Q8N163 923 aaKnown RBP4.11□□□□□ -1.75
SF3B1-203ENST00000414174 NKAPQ8N5F7 415 aaKnown RBP4.11□□□□□ -1.75
SF3B1-203ENST00000414174 MAGEB6Q8N7X4 407 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 LSMEM1Q8N8F7 131 aa4.11□□□□□ -1.75
SF3B1-203ENST00000414174 LILRB1Q8NHL6 650 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms