RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 B4E1Z4 1266 aa9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 OPLAHO14841 1288 aa9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 AMHP03971 560 aa9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 HOXD8P13378 290 aaPredicted RBP9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 NT5C2P49902 561 aa9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 HTRA4P83105 476 aaPredicted RBP9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 TIGD5Q53EQ6 642 aa9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 ARHGEF16Q5VV41 709 aa9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 IQCA1Q86XH1 822 aa9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 DHX37Q8IY37 1157 aaKnown RBP9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 ADGRF4Q8IZF3 695 aa9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 DBF4BQ8NFT6 615 aa9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 MRPL38Q96DV4 380 aaKnown RBP9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 TTC14Q96N46 770 aa9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 IWS1Q96ST2 819 aa9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 UBAC1Q9BSL1 405 aa9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 OSBPL7Q9BZF2 842 aa9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 KRT23Q9C075 422 aa9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 PXMP2Q9NR77 195 aa9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 RABGEF1Q9UJ41 708 aa9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 RBM8AQ9Y5S9 174 aaKnown RBP9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 EMSYQ7Z589 1322 aa9.56□□□□□ -0.88
UPF3AP1-201ENST00000413731 TTC3P53804 2025 aa9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 RGS20O76081 388 aa9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 NR3C2P08235 984 aa9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 CYP21A2P08686 494 aa9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 UBA1P22314 1058 aaKnown RBP9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 THPOP40225 353 aa9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 NR1H3Q13133 447 aa9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 KMT5BQ4FZB7 885 aa9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 EPC2Q52LR7 807 aa9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 ASPRV1Q53RT3 343 aa9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 TCEAL5Q5H9L2 206 aa9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 SERINC5Q86VE9 423 aa9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 RETREG3Q86VR2 466 aa9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 IL31RAQ8NI17 732 aa9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 NEK9Q8TD19 979 aa9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 GPKOWQ92917 476 aaPredicted RBP eCLIP9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 UIMC1Q96RL1 719 aa9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 LSG1Q9H089 658 aaKnown RBP9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 SCUBE2Q9NQ36 999 aa9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 INSL6Q9Y581 213 aa9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 C5orf42Q9H799 3197 aa9.55□□□□□ -0.88
UPF3AP1-201ENST00000413731 PLXNA4Q9HCM2 1894 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 RSPH10B2B2RC85 870 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 DCXO43602 365 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 DHX16O60231 1041 aaKnown RBP9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 PPP1R11O60927 126 aaPredicted RBP9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 EIF3JO75822 258 aaKnown RBP9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 GGPS1O95749 300 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 CFBP00751 764 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 CTSHP09668 335 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 RSPH10BP0C881 870 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 MYCLP12524 364 aaPredicted RBP9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 HSD17B4P51659 736 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 ZP2Q05996 745 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 LAMC2Q13753 1193 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 PTPROQ16827 1216 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 HSDL1Q3SXM5 330 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 PLEKHG4Q58EX7 1191 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 RNF20Q5VTR2 975 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 EP400NLQ6ZTU2 488 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 FBXO11Q86XK2 927 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 DGKHQ86XP1 1220 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 MCF2L2Q86YR7 1114 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 ENAHQ8N8S7 591 aaPredicted RBP9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 MAP4K1Q92918 833 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 SPATA33Q96N06 139 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 ZSCAN10Q96SZ4 725 aaPredicted RBP9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 YME1L1Q96TA2 773 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 PDCD2LQ9BRP1 358 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 C16orf70Q9BSU1 422 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 MAF1Q9H063 256 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 KAT14Q9H8E8 782 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 JMJD4Q9H9V9 463 aa9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 MRPL11Q9Y3B7 192 aaKnown RBP9.54□□□□□ -0.88
UPF3AP1-201ENST00000413731 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 ERICH2A1L162 156 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 C17orf102A2RUQ5 167 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 E7EWF7 191 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 UPP2O95045 317 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 REC8O95072 547 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 CSPG5O95196 566 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 LGALS2P05162 132 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 PARP1P09874 1014 aaKnown RBP9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 SMIM10L2AP0DMW4 78 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 SMIM10L2BP0DMW5 78 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 SKIP12755 728 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 ALADP13716 330 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 HOXA13P31271 388 aaPredicted RBP9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 HOXC8P31273 242 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 MRE11P49959 708 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 SP2Q02086 613 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 NHLH1Q02575 133 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 GHRHRQ02643 423 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 GPM6BQ13491 265 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 COL19A1Q14993 1142 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 SART3Q15020 963 aaKnown RBP9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 PGM5Q15124 567 aa9.53□□□□□ -0.88
UPF3AP1-201ENST00000413731 CCDC178Q5BJE1 867 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms