RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 ACTN1P12814 892 aa16.81■□□□□ 0.28
LIMS4-201ENST00000413601 XBP1P17861 261 aa16.81■□□□□ 0.28
LIMS4-201ENST00000413601 STAT5BP51692 787 aa16.81■□□□□ 0.28
LIMS4-201ENST00000413601 ST3GAL1Q11201 340 aa16.81■□□□□ 0.28
LIMS4-201ENST00000413601 PPFIA1Q13136 1202 aa16.81■□□□□ 0.28
LIMS4-201ENST00000413601 ZNF697Q5TEC3 545 aa16.81■□□□□ 0.28
LIMS4-201ENST00000413601 TRAF7Q6Q0C0 670 aa16.81■□□□□ 0.28
LIMS4-201ENST00000413601 NSUN7Q8NE18 718 aaKnown RBP16.81■□□□□ 0.28
LIMS4-201ENST00000413601 WASF1Q92558 559 aa16.81■□□□□ 0.28
LIMS4-201ENST00000413601 TBC1D22BQ9NU19 505 aa16.81■□□□□ 0.28
LIMS4-201ENST00000413601 LIMCH1Q9UPQ0 1083 aa16.81■□□□□ 0.28
LIMS4-201ENST00000413601 SLC4A7Q9Y6M7 1214 aa16.81■□□□□ 0.28
LIMS4-201ENST00000413601 MICAL3Q7RTP6 2002 aa16.8■□□□□ 0.28
LIMS4-201ENST00000413601 JAK2O60674 1132 aa16.8■□□□□ 0.28
LIMS4-201ENST00000413601 PARNO95453 639 aaKnown RBP16.8■□□□□ 0.28
LIMS4-201ENST00000413601 DNAJB2P25686 324 aa16.8■□□□□ 0.28
LIMS4-201ENST00000413601 PBX2P40425 430 aa16.8■□□□□ 0.28
LIMS4-201ENST00000413601 RBM25P49756 843 aaKnown RBP16.8■□□□□ 0.28
LIMS4-201ENST00000413601 MBTPS1Q14703 1052 aa16.8■□□□□ 0.28
LIMS4-201ENST00000413601 NONOQ15233 471 aaKnown RBP eCLIP16.8■□□□□ 0.28
LIMS4-201ENST00000413601 GRIK4Q16099 956 aa16.8■□□□□ 0.28
LIMS4-201ENST00000413601 ABHD15Q6UXT9 468 aa16.8■□□□□ 0.28
LIMS4-201ENST00000413601 PLPPR4Q7Z2D5 763 aa16.8■□□□□ 0.28
LIMS4-201ENST00000413601 KRT25Q7Z3Z0 450 aa16.8■□□□□ 0.28
LIMS4-201ENST00000413601 OXER1Q8TDS5 423 aa16.8■□□□□ 0.28
LIMS4-201ENST00000413601 IGKV6D-21A0A0A0MT36 114 aa16.79■□□□□ 0.28
LIMS4-201ENST00000413601 RSPH10B2B2RC85 870 aa16.79■□□□□ 0.28
LIMS4-201ENST00000413601 BACH1O14867 736 aa16.79■□□□□ 0.28
LIMS4-201ENST00000413601 MSH4O15457 936 aa16.79■□□□□ 0.28
LIMS4-201ENST00000413601 TDP2O95551 362 aa16.79■□□□□ 0.28
LIMS4-201ENST00000413601 RSPH10BP0C881 870 aa16.79■□□□□ 0.28
LIMS4-201ENST00000413601 INSRRP14616 1297 aa16.79■□□□□ 0.28
LIMS4-201ENST00000413601 IGBP1P78318 339 aa16.79■□□□□ 0.28
LIMS4-201ENST00000413601 PLCB4Q15147 1175 aa16.79■□□□□ 0.28
LIMS4-201ENST00000413601 INF2Q27J81 1249 aa16.79■□□□□ 0.28
LIMS4-201ENST00000413601 MARCH8Q5T0T0 291 aa16.79■□□□□ 0.28
LIMS4-201ENST00000413601 RUFY4Q6ZNE9 571 aa16.79■□□□□ 0.28
LIMS4-201ENST00000413601 PBX4Q9BYU1 374 aa16.79■□□□□ 0.28
LIMS4-201ENST00000413601 TTYH1Q9H313 450 aaPredicted RBP16.79■□□□□ 0.28
LIMS4-201ENST00000413601 SEMA6BQ9H3T3 888 aa16.79■□□□□ 0.28
LIMS4-201ENST00000413601 TRPC6Q9Y210 931 aa16.79■□□□□ 0.28
LIMS4-201ENST00000413601 CYP3A7-CYP3A51PA0A087WV96 503 aa16.78■□□□□ 0.28
LIMS4-201ENST00000413601 CCDC194A0A1B0GVG4 234 aa16.78■□□□□ 0.28
LIMS4-201ENST00000413601 POTEB3A0JP26 581 aa16.78■□□□□ 0.28
LIMS4-201ENST00000413601 CXCL10P02778 98 aa16.78■□□□□ 0.28
LIMS4-201ENST00000413601 CTSHP09668 335 aa16.78■□□□□ 0.28
LIMS4-201ENST00000413601 CYP3A7P24462 503 aa16.78■□□□□ 0.28
LIMS4-201ENST00000413601 FOSBP53539 338 aa16.78■□□□□ 0.28
LIMS4-201ENST00000413601 TCTN1Q2MV58 587 aa16.78■□□□□ 0.28
LIMS4-201ENST00000413601 Q4G0T1 1027 aa16.78■□□□□ 0.28
LIMS4-201ENST00000413601 FAM160B1Q5W0V3 765 aa16.78■□□□□ 0.28
LIMS4-201ENST00000413601 ZNF746Q6NUN9 644 aaPredicted RBP16.78■□□□□ 0.28
LIMS4-201ENST00000413601 SWSAP1Q6NVH7 229 aa16.78■□□□□ 0.28
LIMS4-201ENST00000413601 MIS18BP1Q6P0N0 1132 aa16.78■□□□□ 0.28
LIMS4-201ENST00000413601 POTEBQ6S5H4 581 aa16.78■□□□□ 0.28
LIMS4-201ENST00000413601 CCDC60Q8IWA6 550 aaPredicted RBP16.78■□□□□ 0.28
LIMS4-201ENST00000413601 CCDC83Q8IWF9 413 aa16.78■□□□□ 0.28
LIMS4-201ENST00000413601 TRAPPC12Q8WVT3 735 aa16.78■□□□□ 0.28
LIMS4-201ENST00000413601 GJA10Q969M2 543 aa16.78■□□□□ 0.28
LIMS4-201ENST00000413601 ZBTB10Q96DT7 871 aa16.78■□□□□ 0.28
LIMS4-201ENST00000413601 ZNF302Q9NR11 478 aa16.78■□□□□ 0.28
LIMS4-201ENST00000413601 TUBE1Q9UJT0 475 aa16.78■□□□□ 0.28
LIMS4-201ENST00000413601 MBLAC1A4D2B0 266 aaPredicted RBP16.77■□□□□ 0.28
LIMS4-201ENST00000413601 RRN3P2A6NIE6 340 aa16.77■□□□□ 0.28
LIMS4-201ENST00000413601 ATP2A2P16615 1042 aaKnown RBP16.77■□□□□ 0.28
LIMS4-201ENST00000413601 RABGGTBP53611 331 aa16.77■□□□□ 0.28
LIMS4-201ENST00000413601 KRT76Q01546 638 aa16.77■□□□□ 0.28
LIMS4-201ENST00000413601 PDXDC2PQ6P474 469 aa16.77■□□□□ 0.28
LIMS4-201ENST00000413601 CNKSR3Q6P9H4 555 aa16.77■□□□□ 0.28
LIMS4-201ENST00000413601 PIK3AP1Q6ZUJ8 805 aa16.77■□□□□ 0.28
LIMS4-201ENST00000413601 SMAP1Q8IYB5 467 aaPredicted RBP16.77■□□□□ 0.28
LIMS4-201ENST00000413601 SLC5A5Q92911 643 aa16.77■□□□□ 0.28
LIMS4-201ENST00000413601 TIFAQ96CG3 184 aa16.77■□□□□ 0.28
LIMS4-201ENST00000413601 GUCD1Q96NT3 240 aa16.77■□□□□ 0.28
LIMS4-201ENST00000413601 OSBPL7Q9BZF2 842 aa16.77■□□□□ 0.28
LIMS4-201ENST00000413601 TCEAL9Q9UHQ7 104 aa16.77■□□□□ 0.28
LIMS4-201ENST00000413601 SAMM50Q9Y512 469 aa16.77■□□□□ 0.28
LIMS4-201ENST00000413601 PCDHA10Q9Y5I2 948 aa16.77■□□□□ 0.28
LIMS4-201ENST00000413601 GAS7O60861 476 aa16.76■□□□□ 0.27
LIMS4-201ENST00000413601 CAND2O75155 1236 aa16.76■□□□□ 0.27
LIMS4-201ENST00000413601 BAIAP3O94812 1187 aa16.76■□□□□ 0.27
LIMS4-201ENST00000413601 PSAPP07602 524 aa16.76■□□□□ 0.27
LIMS4-201ENST00000413601 SLC26A2P50443 739 aa16.76■□□□□ 0.27
LIMS4-201ENST00000413601 NR5A1Q13285 461 aa16.76■□□□□ 0.27
LIMS4-201ENST00000413601 LETM2Q2VYF4 491 aa16.76■□□□□ 0.27
LIMS4-201ENST00000413601 EARS2Q5JPH6 523 aaKnown RBP16.76■□□□□ 0.27
LIMS4-201ENST00000413601 LRCH2Q5VUJ6 765 aa16.76■□□□□ 0.27
LIMS4-201ENST00000413601 TAF2Q6P1X5 1199 aa16.76■□□□□ 0.27
LIMS4-201ENST00000413601 DNAJB3Q8WWF6 145 aa16.76■□□□□ 0.27
LIMS4-201ENST00000413601 TNPO1Q92973 898 aaKnown RBP16.76■□□□□ 0.27
LIMS4-201ENST00000413601 ZSCAN31Q96LW9 406 aaPredicted RBP16.76■□□□□ 0.27
LIMS4-201ENST00000413601 MBOAT7Q96N66 472 aa16.76■□□□□ 0.27
LIMS4-201ENST00000413601 RIT2Q99578 217 aa16.76■□□□□ 0.27
LIMS4-201ENST00000413601 MSRAQ9UJ68 235 aa16.76■□□□□ 0.27
LIMS4-201ENST00000413601 FAM205CA6NFA0 338 aa16.75■□□□□ 0.27
LIMS4-201ENST00000413601 CHMP2AO43633 222 aa16.75■□□□□ 0.27
LIMS4-201ENST00000413601 SLC37A4O43826 429 aa16.75■□□□□ 0.27
LIMS4-201ENST00000413601 MYOGP15173 224 aa16.75■□□□□ 0.27
LIMS4-201ENST00000413601 ATP4AP20648 1035 aa16.75■□□□□ 0.27
LIMS4-201ENST00000413601 KRT2P35908 639 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms