RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 IFT57Q9NWB7 429 aa8.6□□□□□ -1.03
CPSF7-203ENST00000413184 GTF2IRD1Q9UHL9 959 aa8.6□□□□□ -1.03
CPSF7-203ENST00000413184 PPP1R9AQ9ULJ8 1098 aa8.6□□□□□ -1.03
CPSF7-203ENST00000413184 PCDHB12Q9Y5F1 795 aa8.6□□□□□ -1.03
CPSF7-203ENST00000413184 PCNX1Q96RV3 2341 aa8.6□□□□□ -1.03
CPSF7-203ENST00000413184 TSC2P49815 1807 aa8.59□□□□□ -1.03
CPSF7-203ENST00000413184 HIDE1A8MVS5 230 aa8.59□□□□□ -1.03
CPSF7-203ENST00000413184 MPHOSPH10O00566 681 aaKnown RBP8.59□□□□□ -1.03
CPSF7-203ENST00000413184 NCAM2O15394 837 aa8.59□□□□□ -1.03
CPSF7-203ENST00000413184 DGKIO75912 1065 aa8.59□□□□□ -1.03
CPSF7-203ENST00000413184 GBP2P32456 591 aaPredicted RBP8.59□□□□□ -1.03
CPSF7-203ENST00000413184 CNR2P34972 360 aa8.59□□□□□ -1.03
CPSF7-203ENST00000413184 GNAI1P63096 354 aa8.59□□□□□ -1.03
CPSF7-203ENST00000413184 APOBRQ0VD83 1088 aa8.59□□□□□ -1.03
CPSF7-203ENST00000413184 C8orf34Q49A92 452 aa8.59□□□□□ -1.03
CPSF7-203ENST00000413184 PAN2Q504Q3 1202 aaKnown RBP8.59□□□□□ -1.03
CPSF7-203ENST00000413184 CMTR2Q8IYT2 770 aaKnown RBP8.59□□□□□ -1.03
CPSF7-203ENST00000413184 LINS1Q8NG48 757 aa8.59□□□□□ -1.03
CPSF7-203ENST00000413184 IPO9Q96P70 1041 aaKnown RBP8.59□□□□□ -1.03
CPSF7-203ENST00000413184 TCF25Q9BQ70 676 aa8.59□□□□□ -1.03
CPSF7-203ENST00000413184 GPCPD1Q9NPB8 672 aa8.59□□□□□ -1.03
CPSF7-203ENST00000413184 LTB4R2Q9NPC1 389 aa8.59□□□□□ -1.03
CPSF7-203ENST00000413184 SLC2A4RGQ9NR83 387 aa8.59□□□□□ -1.03
CPSF7-203ENST00000413184 TMEM260Q9NX78 707 aa8.59□□□□□ -1.03
CPSF7-203ENST00000413184 FBXO40Q9UH90 709 aa8.59□□□□□ -1.03
CPSF7-203ENST00000413184 IL17BQ9UHF5 180 aa8.59□□□□□ -1.03
CPSF7-203ENST00000413184 NOB1Q9ULX3 412 aaKnown RBP8.59□□□□□ -1.03
CPSF7-203ENST00000413184 NOP58Q9Y2X3 529 aaKnown RBP8.59□□□□□ -1.03
CPSF7-203ENST00000413184 DOCK8Q8NF50 2099 aa8.58□□□□□ -1.04
CPSF7-203ENST00000413184 SALL3Q9BXA9 1300 aa8.58□□□□□ -1.04
CPSF7-203ENST00000413184 VAMP4O75379 141 aa8.58□□□□□ -1.04
CPSF7-203ENST00000413184 SPOUT1Q5T280 376 aaKnown RBP8.58□□□□□ -1.04
CPSF7-203ENST00000413184 TCEAL6Q6IPX3 200 aa8.58□□□□□ -1.04
CPSF7-203ENST00000413184 TMC5Q6UXY8 1006 aa8.58□□□□□ -1.04
CPSF7-203ENST00000413184 FTSJ3Q8IY81 847 aaKnown RBP8.58□□□□□ -1.04
CPSF7-203ENST00000413184 CPXCR1Q8N123 301 aa8.58□□□□□ -1.04
CPSF7-203ENST00000413184 TMEM57Q8N5G2 664 aa8.58□□□□□ -1.04
CPSF7-203ENST00000413184 MRPL50Q8N5N7 158 aaKnown RBP8.58□□□□□ -1.04
CPSF7-203ENST00000413184 TSPYL6Q8N831 410 aa8.58□□□□□ -1.04
CPSF7-203ENST00000413184 ZNF384Q8TF68 577 aa8.58□□□□□ -1.04
CPSF7-203ENST00000413184 TCEAL3Q969E4 200 aa8.58□□□□□ -1.04
CPSF7-203ENST00000413184 NXPE3Q969Y0 559 aa8.58□□□□□ -1.04
CPSF7-203ENST00000413184 LIN37Q96GY3 246 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-203ENST00000413184 DDX23Q9BUQ8 820 aaKnown RBP8.58□□□□□ -1.04
CPSF7-203ENST00000413184 HDAC6Q9UBN7 1215 aa8.58□□□□□ -1.04
CPSF7-203ENST00000413184 CTDP1Q9Y5B0 961 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-203ENST00000413184 NAV3Q8IVL0 2385 aa8.57□□□□□ -1.04
CPSF7-203ENST00000413184 A0A087WV48 116 aa8.57□□□□□ -1.04
CPSF7-203ENST00000413184 A6NJR5 290 aa8.57□□□□□ -1.04
CPSF7-203ENST00000413184 FGF18O76093 207 aa8.57□□□□□ -1.04
CPSF7-203ENST00000413184 EPN2O95208 641 aa8.57□□□□□ -1.04
CPSF7-203ENST00000413184 CD72P21854 359 aa8.57□□□□□ -1.04
CPSF7-203ENST00000413184 PHKA1P46020 1223 aa8.57□□□□□ -1.04
CPSF7-203ENST00000413184 RPS9P46781 194 aaKnown RBP8.57□□□□□ -1.04
CPSF7-203ENST00000413184 SIM1P81133 766 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-203ENST00000413184 PRKCQQ04759 706 aa8.57□□□□□ -1.04
CPSF7-203ENST00000413184 LY6DQ14210 128 aa8.57□□□□□ -1.04
CPSF7-203ENST00000413184 MLF2Q15773 248 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-203ENST00000413184 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.57□□□□□ -1.04
CPSF7-203ENST00000413184 THNSL1Q8IYQ7 743 aa8.57□□□□□ -1.04
CPSF7-203ENST00000413184 BBXQ8WY36 941 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-203ENST00000413184 CLDN23Q96B33 292 aa8.57□□□□□ -1.04
CPSF7-203ENST00000413184 SLC32A1Q9H598 525 aa8.57□□□□□ -1.04
CPSF7-203ENST00000413184 VCPKMTQ9H867 229 aa8.57□□□□□ -1.04
CPSF7-203ENST00000413184 VPS45Q9NRW7 570 aa8.57□□□□□ -1.04
CPSF7-203ENST00000413184 DZANK1Q9NVP4 752 aa8.57□□□□□ -1.04
CPSF7-203ENST00000413184 AATFQ9NY61 560 aaKnown RBP eCLIP8.57□□□□□ -1.04
CPSF7-203ENST00000413184 SERPINB13Q9UIV8 391 aa8.57□□□□□ -1.04
CPSF7-203ENST00000413184 SPAG17Q6Q759 2223 aa8.57□□□□□ -1.04
CPSF7-203ENST00000413184 CACNA1FO60840 1977 aa8.57□□□□□ -1.04
CPSF7-203ENST00000413184 COL5A1P20908 1838 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-203ENST00000413184 LRRK2Q5S007 2527 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 SPAARA0A1B0GVQ0 90 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 SPDYE4A6NLX3 237 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 CHURC1-FNTBB4DL54 471 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 IPO8O15397 1037 aaKnown RBP8.56□□□□□ -1.04
CPSF7-203ENST00000413184 BAG3O95817 575 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 PLCG2P16885 1265 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 FNTBP49356 437 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 PDE4BQ07343 736 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 TAF1BQ53T94 588 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-203ENST00000413184 PLA2G2CQ5R387 149 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 ITPRIPQ8IWB1 547 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 SCUBE3Q8IX30 993 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 C8orf58Q8NAV2 365 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 CHST13Q8NET6 341 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 DNAAF4Q8WXU2 420 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 NSUN4Q96CB9 384 aaKnown RBP8.56□□□□□ -1.04
CPSF7-203ENST00000413184 LOXL4Q96JB6 756 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 FCRL3Q96P31 734 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-203ENST00000413184 DCBLD2Q96PD2 775 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 ALG1Q9BT22 464 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 CHMP4AQ9BY43 222 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 RWDD1Q9H446 243 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-203ENST00000413184 PRORYQ9H606 182 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 SH2D4AQ9H788 454 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 ARHGEF10LQ9HCE6 1279 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 NGRNQ9NPE2 291 aaKnown RBP8.56□□□□□ -1.04
CPSF7-203ENST00000413184 DDX19BQ9UMR2 479 aa8.56□□□□□ -1.04
CPSF7-203ENST00000413184 FOCADQ5VW36 1801 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms