RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 NELFBQ8WX92 580 aa9.2□□□□□ -0.94
PBRM1-209ENST00000412587 KIFAP3Q92845 792 aa9.2□□□□□ -0.94
PBRM1-209ENST00000412587 TUBB6Q9BUF5 446 aa9.2□□□□□ -0.94
PBRM1-209ENST00000412587 IFIH1Q9BYX4 1025 aaKnown RBP9.2□□□□□ -0.94
PBRM1-209ENST00000412587 TAB2Q9NYJ8 693 aa9.2□□□□□ -0.94
PBRM1-209ENST00000412587 NUB1Q9Y5A7 615 aa9.2□□□□□ -0.94
PBRM1-209ENST00000412587 ATP6V1G1O75348 118 aa9.2□□□□□ -0.94
PBRM1-209ENST00000412587 CMA1P23946 247 aa9.2□□□□□ -0.94
PBRM1-209ENST00000412587 MSH2P43246 934 aa9.2□□□□□ -0.94
PBRM1-209ENST00000412587 SCTRP47872 440 aa9.2□□□□□ -0.94
PBRM1-209ENST00000412587 SNX1Q13596 522 aa9.2□□□□□ -0.94
PBRM1-209ENST00000412587 ANKRD42Q8N9B4 389 aa9.2□□□□□ -0.94
PBRM1-209ENST00000412587 TTC16Q8NEE8 873 aa9.2□□□□□ -0.94
PBRM1-209ENST00000412587 CATSPER2Q96P56 530 aa9.2□□□□□ -0.94
PBRM1-209ENST00000412587 STRBPQ96SI9 672 aaKnown RBP9.2□□□□□ -0.94
PBRM1-209ENST00000412587 SPC25Q9HBM1 224 aa9.2□□□□□ -0.94
PBRM1-209ENST00000412587 ZSWIM5Q9P217 1185 aa9.2□□□□□ -0.94
PBRM1-209ENST00000412587 ATP6V0A2Q9Y487 856 aa9.2□□□□□ -0.94
PBRM1-209ENST00000412587 DLC1Q96QB1 1528 aa9.2□□□□□ -0.94
PBRM1-209ENST00000412587 KRT75O95678 551 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 TNFAIP3P21580 790 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 MLH1P40692 756 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 PTGDRQ13258 359 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 GPBP1Q86WP2 473 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 NCAPG2Q86XI2 1143 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 ZNF354CQ86Y25 554 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 FUKQ8N0W3 1084 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 MAGEC3Q8TD91 643 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 DYNLL2Q96FJ2 89 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 SUGCTQ9HAC7 445 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 DDX25Q9UHL0 483 aaKnown RBP9.19□□□□□ -0.94
PBRM1-209ENST00000412587 PTPRUQ92729 1446 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 SPATA31A6Q5VVP1 1343 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 PDE5AO76074 875 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 RNASE9P60153 205 aaKnown RBP9.19□□□□□ -0.94
PBRM1-209ENST00000412587 PHEXP78562 749 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 PNOCQ13519 176 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 KRT26Q7Z3Y9 468 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 TRMT44Q8IYL2 757 aaKnown RBP9.19□□□□□ -0.94
PBRM1-209ENST00000412587 NSUN7Q8NE18 718 aaKnown RBP9.19□□□□□ -0.94
PBRM1-209ENST00000412587 USP33Q8TEY7 942 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 FAM81BQ96LP2 452 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 MCF2LO15068 1137 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 BMP3P12645 472 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 TAF12Q16514 161 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 ARMC3Q5W041 872 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 WDR93Q6P2C0 686 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 FOXP4Q8IVH2 680 aaPredicted RBP9.19□□□□□ -0.94
PBRM1-209ENST00000412587 PLAAQ9Y263 795 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 IKBKGQ9Y6K9 419 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 LRRC7Q96NW7 1537 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 PAX3P23760 479 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 CASP14P31944 242 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 HDLBPQ00341 1268 aaKnown RBP9.19□□□□□ -0.94
PBRM1-209ENST00000412587 CRELD2Q6UXH1 353 aaPredicted RBP9.19□□□□□ -0.94
PBRM1-209ENST00000412587 KCTD1Q719H9 257 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 BZW1Q7L1Q6 419 aaKnown RBP9.19□□□□□ -0.94
PBRM1-209ENST00000412587 ENAHQ8N8S7 591 aaPredicted RBP9.19□□□□□ -0.94
PBRM1-209ENST00000412587 MYCBPAPQ8TBZ2 947 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 CD209Q9NNX6 404 aa9.19□□□□□ -0.94
PBRM1-209ENST00000412587 SOS2Q07890 1332 aaPredicted RBP9.18□□□□□ -0.94
PBRM1-209ENST00000412587 ATXN2Q99700 1313 aaKnown RBP9.18□□□□□ -0.94
PBRM1-209ENST00000412587 MAGEA13PA6NCF6 341 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 CCT8L1PA6NM43 557 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 SH2B2O14492 632 aaPredicted RBP9.18□□□□□ -0.94
PBRM1-209ENST00000412587 FMNL1O95466 1100 aaPredicted RBP9.18□□□□□ -0.94
PBRM1-209ENST00000412587 MMEP08473 750 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 PRDX5P30044 214 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 ESRRGP62508 458 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 NFIXQ14938 502 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 KLC3Q6P597 504 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 PODNQ7Z5L7 613 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 CCDC84Q86UT8 332 aaPredicted RBP9.18□□□□□ -0.94
PBRM1-209ENST00000412587 GSPT2Q8IYD1 628 aaKnown RBP9.18□□□□□ -0.94
PBRM1-209ENST00000412587 SCYL3Q8IZE3 742 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 LRRC43Q8N309 656 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 ATP11CQ8NB49 1132 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 XAB2Q9HCS7 855 aaKnown RBP9.18□□□□□ -0.94
PBRM1-209ENST00000412587 PARP2Q9UGN5 583 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 RCOR1Q9UKL0 485 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 PCDHA7Q9UN72 937 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 C2CD2Q9Y426 696 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 BZW2Q9Y6E2 419 aaKnown RBP9.18□□□□□ -0.94
PBRM1-209ENST00000412587 RPAP1Q9BWH6 1393 aaPredicted RBP9.18□□□□□ -0.94
PBRM1-209ENST00000412587 NVLO15381 856 aaKnown RBP9.18□□□□□ -0.94
PBRM1-209ENST00000412587 IFNAR1P17181 557 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 LIFRP42702 1097 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 NEK2P51955 445 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 NECTIN1Q15223 517 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 DHX40Q8IX18 779 aaKnown RBP9.18□□□□□ -0.94
PBRM1-209ENST00000412587 PPP1R14CQ8TAE6 165 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 DEPTORQ8TB45 409 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 TEKT3Q9BXF9 490 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 FOXP1Q9H334 677 aaPredicted RBP9.18□□□□□ -0.94
PBRM1-209ENST00000412587 DKK3Q9UBP4 350 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 DDX20Q9UHI6 824 aaKnown RBP9.18□□□□□ -0.94
PBRM1-209ENST00000412587 NEXMIFQ5QGS0 1516 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 ZBTB7AO95365 584 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 GSTA1P08263 222 aa9.18□□□□□ -0.94
PBRM1-209ENST00000412587 HSPA1LP34931 641 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms