RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 SPIRE1Q08AE8 756 aa15.73■□□□□ 0.11
CPNE1-206ENST00000412056 PPP2R5CQ13362 524 aa15.73■□□□□ 0.11
CPNE1-206ENST00000412056 ORC2Q13416 577 aaPredicted RBP15.73■□□□□ 0.11
CPNE1-206ENST00000412056 BECN1Q14457 450 aa15.73■□□□□ 0.11
CPNE1-206ENST00000412056 HIC1Q14526 733 aa15.73■□□□□ 0.11
CPNE1-206ENST00000412056 RILPL1Q5EBL4 403 aa15.73■□□□□ 0.11
CPNE1-206ENST00000412056 FAM160B1Q5W0V3 765 aa15.73■□□□□ 0.11
CPNE1-206ENST00000412056 GDF6Q6KF10 455 aaPredicted RBP15.73■□□□□ 0.11
CPNE1-206ENST00000412056 SWSAP1Q6NVH7 229 aa15.73■□□□□ 0.11
CPNE1-206ENST00000412056 C7orf31Q8N865 590 aa15.73■□□□□ 0.11
CPNE1-206ENST00000412056 MTMR9Q96QG7 549 aa15.73■□□□□ 0.11
CPNE1-206ENST00000412056 PRDM5Q9NQX1 630 aaPredicted RBP15.73■□□□□ 0.11
CPNE1-206ENST00000412056 ZNF302Q9NR11 478 aa15.73■□□□□ 0.11
CPNE1-206ENST00000412056 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.73■□□□□ 0.11
CPNE1-206ENST00000412056 ERAP1Q9NZ08 941 aa15.73■□□□□ 0.11
CPNE1-206ENST00000412056 PCDHA10Q9Y5I2 948 aa15.73■□□□□ 0.11
CPNE1-206ENST00000412056 NR2E3Q9Y5X4 410 aa15.73■□□□□ 0.11
CPNE1-206ENST00000412056 SCN5AQ14524 2016 aa15.73■□□□□ 0.11
CPNE1-206ENST00000412056 IGSF9BQ9UPX0 1349 aa15.72■□□□□ 0.11
CPNE1-206ENST00000412056 TRIM43BA6NCK2 446 aa15.72■□□□□ 0.11
CPNE1-206ENST00000412056 SFNP31947 248 aa15.72■□□□□ 0.11
CPNE1-206ENST00000412056 TXKP42681 527 aa15.72■□□□□ 0.11
CPNE1-206ENST00000412056 ZNF200P98182 395 aaPredicted RBP15.72■□□□□ 0.11
CPNE1-206ENST00000412056 PLCB4Q15147 1175 aa15.72■□□□□ 0.11
CPNE1-206ENST00000412056 UGCGQ16739 394 aa15.72■□□□□ 0.11
CPNE1-206ENST00000412056 NCAPH2Q6IBW4 605 aa15.72■□□□□ 0.11
CPNE1-206ENST00000412056 PLPPR4Q7Z2D5 763 aa15.72■□□□□ 0.11
CPNE1-206ENST00000412056 BRAPQ7Z569 592 aa15.72■□□□□ 0.11
CPNE1-206ENST00000412056 AFAP1L1Q8TED9 768 aa15.72■□□□□ 0.11
CPNE1-206ENST00000412056 TRIM43Q96BQ3 446 aaPredicted RBP15.72■□□□□ 0.11
CPNE1-206ENST00000412056 CTAGE1Q96RT6 745 aa15.72■□□□□ 0.11
CPNE1-206ENST00000412056 TTC12Q9H892 705 aaPredicted RBP15.72■□□□□ 0.11
CPNE1-206ENST00000412056 GABBR1Q9UBS5 961 aa15.72■□□□□ 0.11
CPNE1-206ENST00000412056 LOXHD1Q8IVV2 1947 aa15.71■□□□□ 0.11
CPNE1-206ENST00000412056 H0YGN5 161 aa15.71■□□□□ 0.11
CPNE1-206ENST00000412056 CYP2C9P11712 490 aa15.71■□□□□ 0.11
CPNE1-206ENST00000412056 ATP4AP20648 1035 aa15.71■□□□□ 0.11
CPNE1-206ENST00000412056 HOXC8P31273 242 aa15.71■□□□□ 0.11
CPNE1-206ENST00000412056 PDXDC2PQ6P474 469 aa15.71■□□□□ 0.11
CPNE1-206ENST00000412056 C4orf32Q8N8J7 132 aa15.71■□□□□ 0.11
CPNE1-206ENST00000412056 RDM1Q8NG50 284 aa15.71■□□□□ 0.11
CPNE1-206ENST00000412056 TMEM39AQ9NV64 488 aa15.71■□□□□ 0.11
CPNE1-206ENST00000412056 SETD4Q9NVD3 440 aa15.71■□□□□ 0.11
CPNE1-206ENST00000412056 TBX21Q9UL17 535 aa15.71■□□□□ 0.11
CPNE1-206ENST00000412056 MAFBQ9Y5Q3 323 aaPredicted RBP15.71■□□□□ 0.11
CPNE1-206ENST00000412056 SIP14410 1827 aa15.71■□□□□ 0.1
CPNE1-206ENST00000412056 MKI67P46013 3256 aaKnown RBP15.7■□□□□ 0.1
CPNE1-206ENST00000412056 C17orf102A2RUQ5 167 aa15.7■□□□□ 0.1
CPNE1-206ENST00000412056 POTEMA6NI47 508 aa15.7■□□□□ 0.1
CPNE1-206ENST00000412056 ZNF862O60290 1169 aa15.7■□□□□ 0.1
CPNE1-206ENST00000412056 PPFIA1Q13136 1202 aa15.7■□□□□ 0.1
CPNE1-206ENST00000412056 PTGDRQ13258 359 aa15.7■□□□□ 0.1
CPNE1-206ENST00000412056 PKP1Q13835 747 aa15.7■□□□□ 0.1
CPNE1-206ENST00000412056 PTGISQ16647 500 aa15.7■□□□□ 0.1
CPNE1-206ENST00000412056 FOXD4L5Q5VV16 416 aaPredicted RBP15.7■□□□□ 0.1
CPNE1-206ENST00000412056 FAM173BQ6P4H8 233 aa15.7■□□□□ 0.1
CPNE1-206ENST00000412056 FOXD4L4Q8WXT5 416 aaPredicted RBP15.7■□□□□ 0.1
CPNE1-206ENST00000412056 PCDHA12Q9UN75 941 aa15.7■□□□□ 0.1
CPNE1-206ENST00000412056 TRPC6Q9Y210 931 aa15.7■□□□□ 0.1
CPNE1-206ENST00000412056 TCHHQ07283 1943 aa15.7■□□□□ 0.1
CPNE1-206ENST00000412056 POTEB3A0JP26 581 aa15.69■□□□□ 0.1
CPNE1-206ENST00000412056 KIAA0355O15063 1070 aa15.69■□□□□ 0.1
CPNE1-206ENST00000412056 ITGB8P26012 769 aa15.69■□□□□ 0.1
CPNE1-206ENST00000412056 SLC26A2P50443 739 aa15.69■□□□□ 0.1
CPNE1-206ENST00000412056 ADAM17P78536 824 aa15.69■□□□□ 0.1
CPNE1-206ENST00000412056 PRKCEQ02156 737 aa15.69■□□□□ 0.1
CPNE1-206ENST00000412056 GRIK4Q16099 956 aa15.69■□□□□ 0.1
CPNE1-206ENST00000412056 POTEBQ6S5H4 581 aa15.69■□□□□ 0.1
CPNE1-206ENST00000412056 TRMT1LQ7Z2T5 733 aaKnown RBP15.69■□□□□ 0.1
CPNE1-206ENST00000412056 CKAP2LQ8IYA6 745 aa15.69■□□□□ 0.1
CPNE1-206ENST00000412056 BANK1Q8NDB2 785 aa15.69■□□□□ 0.1
CPNE1-206ENST00000412056 ATP8B4Q8TF62 1192 aa15.69■□□□□ 0.1
CPNE1-206ENST00000412056 LMBR1Q8WVP7 490 aa15.69■□□□□ 0.1
CPNE1-206ENST00000412056 DHX38Q92620 1227 aaKnown RBP15.69■□□□□ 0.1
CPNE1-206ENST00000412056 PPP1R12CQ9BZL4 782 aa15.69■□□□□ 0.1
CPNE1-206ENST00000412056 PRKAG2Q9UGJ0 569 aa15.69■□□□□ 0.1
CPNE1-206ENST00000412056 NOD1Q9Y239 953 aa15.69■□□□□ 0.1
CPNE1-206ENST00000412056 UMODL1Q5DID0 1318 aa15.68■□□□□ 0.1
CPNE1-206ENST00000412056 TREHO43280 583 aa15.68■□□□□ 0.1
CPNE1-206ENST00000412056 HBP1O60381 514 aa15.68■□□□□ 0.1
CPNE1-206ENST00000412056 INSRRP14616 1297 aa15.68■□□□□ 0.1
CPNE1-206ENST00000412056 TECP42680 631 aa15.68■□□□□ 0.1
CPNE1-206ENST00000412056 IGBP1P78318 339 aa15.68■□□□□ 0.1
CPNE1-206ENST00000412056 ATP2C1P98194 919 aaPredicted RBP15.68■□□□□ 0.1
CPNE1-206ENST00000412056 EPHA7Q15375 998 aa15.68■□□□□ 0.1
CPNE1-206ENST00000412056 TRAPPC12Q8WVT3 735 aa15.68■□□□□ 0.1
CPNE1-206ENST00000412056 ATP6V0A1Q93050 837 aa15.68■□□□□ 0.1
CPNE1-206ENST00000412056 WNT8BQ93098 351 aa15.68■□□□□ 0.1
CPNE1-206ENST00000412056 ZBTB10Q96DT7 871 aa15.68■□□□□ 0.1
CPNE1-206ENST00000412056 NOC4LQ9BVI4 516 aaKnown RBP15.68■□□□□ 0.1
CPNE1-206ENST00000412056 FTOQ9C0B1 505 aaKnown RBP eCLIP15.68■□□□□ 0.15e-10■□□□□ 9.7
CPNE1-206ENST00000412056 HIPK3Q9H422 1215 aa15.68■□□□□ 0.1
CPNE1-206ENST00000412056 ZSCAN16Q9H4T2 348 aaPredicted RBP15.68■□□□□ 0.1
CPNE1-206ENST00000412056 RGL1Q9NZL6 768 aa15.68■□□□□ 0.1
CPNE1-206ENST00000412056 TNRC18O15417 2968 aaPredicted RBP15.68■□□□□ 0.1
CPNE1-206ENST00000412056 NRCAMQ92823 1304 aa15.68■□□□□ 0.1
CPNE1-206ENST00000412056 CEP290O15078 2479 aa15.67■□□□□ 0.1
CPNE1-206ENST00000412056 LAD1O00515 517 aa15.67■□□□□ 0.1
CPNE1-206ENST00000412056 F13A1P00488 732 aa15.67■□□□□ 0.1
CPNE1-206ENST00000412056 OATP04181 439 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms