RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 MAFBQ9Y5Q3 323 aaPredicted RBP17.4■□□□□ 0.38
TRAPPC12-203ENST00000411973 NR2E3Q9Y5X4 410 aa17.4■□□□□ 0.38
TRAPPC12-203ENST00000411973 BACH1O14867 736 aa17.39■□□□□ 0.37
TRAPPC12-203ENST00000411973 TLR3O15455 904 aaKnown RBP17.39■□□□□ 0.37
TRAPPC12-203ENST00000411973 CHMP2AO43633 222 aa17.39■□□□□ 0.37
TRAPPC12-203ENST00000411973 OR52Z1P0C646 297 aa17.39■□□□□ 0.37
TRAPPC12-203ENST00000411973 CHMP4BP1P59074 171 aa17.39■□□□□ 0.37
TRAPPC12-203ENST00000411973 FAAP100Q0VG06 881 aa17.39■□□□□ 0.37
TRAPPC12-203ENST00000411973 FAM47CQ5HY64 1035 aa17.39■□□□□ 0.37
TRAPPC12-203ENST00000411973 MIER3Q7Z3K6 550 aa17.39■□□□□ 0.37
TRAPPC12-203ENST00000411973 C7orf61Q8IZ16 206 aa17.39■□□□□ 0.37
TRAPPC12-203ENST00000411973 TTC12Q9H892 705 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC12-203ENST00000411973 SAMM50Q9Y512 469 aa17.39■□□□□ 0.37
TRAPPC12-203ENST00000411973 EML1O00423 815 aa17.38■□□□□ 0.37
TRAPPC12-203ENST00000411973 B4GALT4O60513 344 aa17.38■□□□□ 0.37
TRAPPC12-203ENST00000411973 CLTBP09497 229 aa17.38■□□□□ 0.37
TRAPPC12-203ENST00000411973 SMIM10L2AP0DMW4 78 aa17.38■□□□□ 0.37
TRAPPC12-203ENST00000411973 SMIM10L2BP0DMW5 78 aa17.38■□□□□ 0.37
TRAPPC12-203ENST00000411973 TXKP42681 527 aa17.38■□□□□ 0.37
TRAPPC12-203ENST00000411973 PTGDRQ13258 359 aa17.38■□□□□ 0.37
TRAPPC12-203ENST00000411973 GDF6Q6KF10 455 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC12-203ENST00000411973 PPP1R13LQ8WUF5 828 aa17.38■□□□□ 0.37
TRAPPC12-203ENST00000411973 TNPO1Q92973 898 aaKnown RBP17.38■□□□□ 0.37
TRAPPC12-203ENST00000411973 TRPV6Q9H1D0 765 aa17.38■□□□□ 0.37
TRAPPC12-203ENST00000411973 PDLIM7Q9NR12 457 aa17.38■□□□□ 0.37
TRAPPC12-203ENST00000411973 TRMT13Q9NUP7 481 aaKnown RBP17.38■□□□□ 0.37
TRAPPC12-203ENST00000411973 GABBR1Q9UBS5 961 aa17.38■□□□□ 0.37
TRAPPC12-203ENST00000411973 IGSF9BQ9UPX0 1349 aa17.38■□□□□ 0.37
TRAPPC12-203ENST00000411973 ATP4AP20648 1035 aa17.37■□□□□ 0.37
TRAPPC12-203ENST00000411973 PLCB4Q15147 1175 aa17.37■□□□□ 0.37
TRAPPC12-203ENST00000411973 EPHA7Q15375 998 aa17.37■□□□□ 0.37
TRAPPC12-203ENST00000411973 PDXDC2PQ6P474 469 aa17.37■□□□□ 0.37
TRAPPC12-203ENST00000411973 ATP8B4Q8TF62 1192 aa17.37■□□□□ 0.37
TRAPPC12-203ENST00000411973 CTAGE1Q96RT6 745 aa17.37■□□□□ 0.37
TRAPPC12-203ENST00000411973 TBX21Q9UL17 535 aa17.37■□□□□ 0.37
TRAPPC12-203ENST00000411973 NRCAMQ92823 1304 aa17.37■□□□□ 0.37
TRAPPC12-203ENST00000411973 MYH15Q9Y2K3 1946 aa17.37■□□□□ 0.37
TRAPPC12-203ENST00000411973 POTEB3A0JP26 581 aa17.36■□□□□ 0.37
TRAPPC12-203ENST00000411973 KIAA0355O15063 1070 aa17.36■□□□□ 0.37
TRAPPC12-203ENST00000411973 ZSCAN22P10073 491 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC12-203ENST00000411973 GNAT1P11488 350 aa17.36■□□□□ 0.37
TRAPPC12-203ENST00000411973 MARK3P27448 753 aa17.36■□□□□ 0.37
TRAPPC12-203ENST00000411973 PRPHP41219 470 aa17.36■□□□□ 0.37
TRAPPC12-203ENST00000411973 FXR2P51116 673 aaKnown RBP eCLIP17.36■□□□□ 0.37
TRAPPC12-203ENST00000411973 ADAM17P78536 824 aa17.36■□□□□ 0.37
TRAPPC12-203ENST00000411973 ATP2C1P98194 919 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC12-203ENST00000411973 HIC1Q14526 733 aa17.36■□□□□ 0.37
TRAPPC12-203ENST00000411973 PTGISQ16647 500 aa17.36■□□□□ 0.37
TRAPPC12-203ENST00000411973 POTEBQ6S5H4 581 aa17.36■□□□□ 0.37
TRAPPC12-203ENST00000411973 ATP6V0A1Q93050 837 aa17.36■□□□□ 0.37
TRAPPC12-203ENST00000411973 TMEM39AQ9NV64 488 aa17.36■□□□□ 0.37
TRAPPC12-203ENST00000411973 C17orf102A2RUQ5 167 aa17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 TRIM43BA6NCK2 446 aa17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 RRN3P2A6NIE6 340 aa17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 ZNF862O60290 1169 aa17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 HBP1O60381 514 aa17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 BMP15O95972 392 aa17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 P4HBP07237 508 aaKnown RBP17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 PPFIA1Q13136 1202 aa17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 PKP1Q13835 747 aa17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 PDIA5Q14554 519 aa17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 UGCGQ16739 394 aa17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 ARL6IP4Q66PJ3 421 aaKnown RBP17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 NCAPH2Q6IBW4 605 aa17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 SH3RF1Q7Z6J0 888 aa17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 LMBR1Q8WVP7 490 aa17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 BBXQ8WY36 941 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 TRIM43Q96BQ3 446 aaPredicted RBP17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 FAM167AQ96KS9 214 aa17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 SETD4Q9NVD3 440 aa17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 PRKAG2Q9UGJ0 569 aa17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 TRPC6Q9Y210 931 aa17.35■□□□□ 0.37
TRAPPC12-203ENST00000411973 DKC1O60832 514 aaKnown RBP eCLIP17.34■□□□□ 0.37
TRAPPC12-203ENST00000411973 F13A1P00488 732 aa17.34■□□□□ 0.37
TRAPPC12-203ENST00000411973 COL1A2P08123 1366 aa17.34■□□□□ 0.37
TRAPPC12-203ENST00000411973 INSRRP14616 1297 aa17.34■□□□□ 0.37
TRAPPC12-203ENST00000411973 TECP42680 631 aa17.34■□□□□ 0.37
TRAPPC12-203ENST00000411973 QARSP47897 775 aaKnown RBP17.34■□□□□ 0.37
TRAPPC12-203ENST00000411973 PSMC5P62195 406 aa17.34■□□□□ 0.37
TRAPPC12-203ENST00000411973 LTBP2Q14767 1821 aa17.34■□□□□ 0.37
TRAPPC12-203ENST00000411973 TMEM266Q2M3C6 531 aa17.34■□□□□ 0.37
TRAPPC12-203ENST00000411973 FAM173BQ6P4H8 233 aa17.34■□□□□ 0.37
TRAPPC12-203ENST00000411973 NEK9Q8TD19 979 aa17.34■□□□□ 0.37
TRAPPC12-203ENST00000411973 HSD17B14Q9BPX1 270 aa17.34■□□□□ 0.37
TRAPPC12-203ENST00000411973 CEP131Q9UPN4 1083 aa17.34■□□□□ 0.37
TRAPPC12-203ENST00000411973 NOD1Q9Y239 953 aa17.34■□□□□ 0.37
TRAPPC12-203ENST00000411973 MBLAC1A4D2B0 266 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC12-203ENST00000411973 POTEMA6NI47 508 aa17.33■□□□□ 0.36
TRAPPC12-203ENST00000411973 H0YGN5 161 aa17.33■□□□□ 0.36
TRAPPC12-203ENST00000411973 BRD1O95696 1058 aa17.33■□□□□ 0.36
TRAPPC12-203ENST00000411973 OATP04181 439 aa17.33■□□□□ 0.36
TRAPPC12-203ENST00000411973 ZNF200P98182 395 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC12-203ENST00000411973 PRKCEQ02156 737 aa17.33■□□□□ 0.36
TRAPPC12-203ENST00000411973 RBL2Q08999 1139 aa17.33■□□□□ 0.36
TRAPPC12-203ENST00000411973 PTK7Q13308 1070 aa17.33■□□□□ 0.36
TRAPPC12-203ENST00000411973 SF3A1Q15459 793 aaKnown RBP17.33■□□□□ 0.36
TRAPPC12-203ENST00000411973 GRIK4Q16099 956 aa17.33■□□□□ 0.36
TRAPPC12-203ENST00000411973 IL17AQ16552 155 aa17.33■□□□□ 0.36
TRAPPC12-203ENST00000411973 XKR3Q5GH77 459 aa17.33■□□□□ 0.36
TRAPPC12-203ENST00000411973 ZNF484Q5JVG2 852 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms