RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 PLEKHF1Q96S99 279 aa4.3□□□□□ -1.72
RNU6-55P-201ENST00000411092 PPP1R9BQ96SB3 815 aa4.3□□□□□ -1.72
RNU6-55P-201ENST00000411092 MAP7D2Q96T17 732 aa4.3□□□□□ -1.72
RNU6-55P-201ENST00000411092 MTA3Q9BTC8 594 aa4.3□□□□□ -1.72
RNU6-55P-201ENST00000411092 ACBD3Q9H3P7 528 aa4.3□□□□□ -1.72
RNU6-55P-201ENST00000411092 RRAGDQ9NQL2 400 aaPredicted RBP4.3□□□□□ -1.72
RNU6-55P-201ENST00000411092 SLC52A1Q9NWF4 448 aa4.3□□□□□ -1.72
RNU6-55P-201ENST00000411092 CPSF1Q10570 1443 aaKnown RBP4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 TMEM131LA2VDJ0 1609 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 ABCC4O15439 1325 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 NRKQ7Z2Y5 1582 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 DIP2CQ9Y2E4 1556 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 TRBV23OR9-2A0A075B6M9 112 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 C7orf72A4D263 438 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 UNCXA6NJT0 531 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 CDC45O75419 566 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 PMLP29590 882 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 HTRA3P83110 453 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 MTERF4Q7Z6M4 381 aaKnown RBP4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 NETO2Q8NC67 525 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 SSH1Q8WYL5 1049 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 TNPO1Q92973 898 aaKnown RBP4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 ANAPC16Q96DE5 110 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 PEX11GQ96HA9 241 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 TEPSINQ96N21 525 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 NAP1L5Q96NT1 182 aaPredicted RBP4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 APBA2Q99767 749 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 KRTAP17-1Q9BYP8 105 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 API5Q9BZZ5 524 aaKnown RBP4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 TGIF2Q9GZN2 237 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 SLC12A5Q9H2X9 1139 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 GPRC5CQ9NQ84 441 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 CLEC1BQ9P126 229 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 NUDT5Q9UKK9 219 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 INPP5FQ9Y2H2 1132 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 RRP7AQ9Y3A4 280 aaKnown RBP4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 ARHGEF40Q8TER5 1519 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 CD163L1Q9NR16 1453 aa4.29□□□□□ -1.72
RNU6-55P-201ENST00000411092 AATKQ6ZMQ8 1374 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 N4BP2Q86UW6 1770 aaPredicted RBP4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 CACNA1FO60840 1977 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 NPHS1O60500 1241 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 DIAPH1O60610 1272 aaKnown RBP4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 FUCA1P04066 466 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 CELA3BP08861 270 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 PLS3P13797 630 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 GNAI1P63096 354 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 EXOSC9Q06265 439 aaKnown RBP4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 SCRN1Q12765 414 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 HSP90AA2PQ14568 343 aaPredicted RBP4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 SLC9A5Q14940 896 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 MBLAC2Q68D91 279 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 WWC2Q6AWC2 1192 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 CASC1Q6TDU7 716 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 LIPIQ6XZB0 460 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 HDGFL2Q7Z4V5 671 aaPredicted RBP4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 FRMD5Q7Z6J6 570 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 B3GNT8Q7Z7M8 397 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 SAPCD2Q86UD0 394 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 ZSCAN30Q86W11 494 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 CRACR2BQ8N4Y2 399 aaPredicted RBP4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 TMEM57Q8N5G2 664 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 BVESQ8NE79 360 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 COPS5Q92905 334 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 PPP1R14AQ96A00 147 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 SPATA25Q9BR10 227 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 LGR4Q9BXB1 951 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 IFT57Q9NWB7 429 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 STRIP2Q9ULQ0 834 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 NOB1Q9ULX3 412 aaKnown RBP4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 EMC9Q9Y3B6 208 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 SIT1Q9Y3P8 196 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 RICTORQ6R327 1708 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 KNDC1Q76NI1 1749 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 MON2Q7Z3U7 1717 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 DLG5Q8TDM6 1919 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 YTHDC2Q9H6S0 1430 aaKnown RBP4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 MAP2P11137 1827 aaKnown RBP4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 MYO5BQ9ULV0 1848 aa4.28□□□□□ -1.72
RNU6-55P-201ENST00000411092 ITSN1Q15811 1721 aa4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 CFAP65Q6ZU64 1925 aaKnown RBP4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 SH3D21A4FU49 640 aa4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 NOP56O00567 594 aaKnown RBP4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 EPB41L2O43491 1005 aaKnown RBP4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 ZBTB7AO95365 584 aa4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 NTRK1P04629 796 aa4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 THBDP07204 575 aa4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 ATF4P18848 351 aaPredicted RBP4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 MCM2P49736 904 aa4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 RIPK4P57078 832 aa4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 NFE2L2Q16236 605 aa4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 POMZP3Q6PJE2 187 aa4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 SMARCC2Q8TAQ2 1214 aa4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 PLEKHO2Q8TD55 490 aa4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 TSR2Q969E8 191 aaKnown RBP4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 NOX5Q96PH1 765 aa4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 MMP19Q99542 508 aa4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 PANK2Q9BZ23 570 aa4.27□□□□□ -1.73
RNU6-55P-201ENST00000411092 PDCL3Q9H2J4 239 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms