RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 RRP12Q5JTH9 1297 aaKnown RBP2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 FBXO47Q5MNV8 452 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 ATAT1Q5SQI0 421 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 ZMYM1Q5SVZ6 1142 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 UTP14CQ5TAP6 766 aaKnown RBP2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 SYCE2Q6PIF2 218 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 METTL7BQ6UX53 244 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 RUFY4Q6ZNE9 571 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 MFSD6Q6ZSS7 791 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 TSHZ1Q6ZSZ6 1077 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 STOX1Q6ZVD7 989 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 TMC7Q7Z402 723 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 RTN4RL1Q86UN2 441 aaPredicted RBP2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 DGKHQ86XP1 1220 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 CCDC105Q8IYK2 499 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 THNSL1Q8IYQ7 743 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 ADGRF4Q8IZF3 695 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 CRIPAKQ8N1N5 446 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 TDRD5Q8NAT2 981 aaKnown RBP2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 FLCNQ8NFG4 579 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 VN1R2Q8NFZ6 395 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 CYP2W1Q8TAV3 490 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 RASGRP4Q8TDF6 673 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 PANK1Q8TE04 598 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 LMBR1Q8WVP7 490 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 RUBCNQ92622 972 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 CASP10Q92851 521 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 TNPO1Q92973 898 aaKnown RBP2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 CNTNAP3BQ96NU0 1288 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 SEC62Q99442 399 aaKnown RBP2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 GPR20Q99678 358 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 APOL5Q9BWW9 433 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 AMNQ9BXJ7 453 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 CNTNAP3Q9BZ76 1288 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 ADAM7Q9H2U9 754 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 CPVLQ9H3G5 476 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 VAT1LQ9HCJ6 419 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 NGRNQ9NPE2 291 aaKnown RBP2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 ZBTB40Q9NUA8 1239 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 RNF216Q9NWF9 866 aaPredicted RBP2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 TMEM260Q9NX78 707 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 LIMD1Q9UGP4 676 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 LRFN2Q9ULH4 789 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 LZTS1Q9Y250 596 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 PCDHA1Q9Y5I3 950 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 CDY2AQ9Y6F7 541 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 SQORQ9Y6N5 450 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 BAZ2AQ9UIF9 1905 aaKnown RBP2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 COL4A4P53420 1690 aaPredicted RBP2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 COL4A6Q14031 1691 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 MYO10Q9HD67 2058 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 DCHS1Q96JQ0 3298 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 TTC41PQ6P2S7 1318 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 GREB1LQ9C091 1923 aaPredicted RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 ZNF292O60281 2723 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 USP34Q70CQ2 3546 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 TANC1Q9C0D5 1861 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 MBLAC1A4D2B0 266 aaPredicted RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 RRN3P2A6NIE6 340 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 TBKBP1A7MCY6 615 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 TRIM6-TRIM34B2RNG4 842 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 SPATA31C2B4DYI2 1134 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 GCOM1H8Y6P7 765 aaPredicted RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 STK25O00506 426 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 ZBTB5O15062 677 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 FIBPO43427 364 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 PI15O43692 258 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 STAM2O75886 525 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 FGAP02671 866 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 ASGR2P07307 311 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 PARP1P09874 1014 aaKnown RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 POLR2MP0CAP2 368 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 LAG3P18627 525 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 IBSPP21815 317 aaPredicted RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 CCND2P30279 289 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 HOXA13P31271 388 aaPredicted RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 CD52P31358 61 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 PPM1AP35813 382 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 SARSP49591 514 aaKnown RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 MRPS6P82932 125 aaKnown RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 PLCB3Q01970 1234 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 SP4Q02446 784 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 KRT17Q04695 432 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 NFX1Q12986 1120 aaKnown RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 PAK2Q13177 524 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 TDGQ13569 410 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 KCNC3Q14003 757 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 GRIK4Q16099 956 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 ST3GAL2Q16842 350 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 ASPRV1Q53RT3 343 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 ODR4Q5SWX8 454 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 VPS53Q5VIR6 699 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 KIAA0319Q5VV43 1072 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 PLPP4Q5VZY2 271 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 TSHZ3Q63HK5 1081 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 CWF19L1Q69YN2 538 aaKnown RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 LLGL2Q6P1M3 1020 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 ZC3H14Q6PJT7 736 aaKnown RBP2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 SLC24A5Q71RS6 500 aa2.74□□□□□ -1.97
RNU4-53P-201ENST00000410828 CYFIP1Q7L576 1253 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms