RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 ZFP69BQ9UJL9 534 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 ZNF839A8K0R7 811 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 B4E1Z4 1266 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 DNAJC8O75937 253 aaPredicted RBP6.07□□□□□ -1.44
PMS1-203ENST00000409593 KCNA6P17658 529 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 MLLT6P55198 1093 aaPredicted RBP6.07□□□□□ -1.44
PMS1-203ENST00000409593 PABPC4Q13310 644 aaKnown RBP eCLIP6.07□□□□□ -1.44
PMS1-203ENST00000409593 C21orf62-AS1Q17RA5 79 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 HHIPL2Q6UWX4 724 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 OVCH1Q7RTY7 1134 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 TXNDC5Q8NBS9 432 aaKnown RBP6.07□□□□□ -1.44
PMS1-203ENST00000409593 SAMD15Q9P1V8 674 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 CD2APQ9Y5K6 639 aa6.07□□□□□ -1.44
PMS1-203ENST00000409593 TNPO3Q9Y5L0 923 aaKnown RBP6.07□□□□□ -1.44
PMS1-203ENST00000409593 SLC12A8A0AV02 714 aa6.06□□□□□ -1.44
PMS1-203ENST00000409593 M0R2C6 588 aa6.06□□□□□ -1.44
PMS1-203ENST00000409593 CLASP2O75122 1294 aaKnown RBP6.06□□□□□ -1.44
PMS1-203ENST00000409593 CDC45O75419 566 aa6.06□□□□□ -1.44
PMS1-203ENST00000409593 KRT37O76014 449 aa6.06□□□□□ -1.44
PMS1-203ENST00000409593 ASLP04424 464 aa6.06□□□□□ -1.44
PMS1-203ENST00000409593 IL13P35225 146 aa6.06□□□□□ -1.44
PMS1-203ENST00000409593 RANGAP1P46060 587 aaPredicted RBP6.06□□□□□ -1.44
PMS1-203ENST00000409593 DBPQ10586 325 aaPredicted RBP6.06□□□□□ -1.44
PMS1-203ENST00000409593 FAM26FQ5R3K3 315 aa6.06□□□□□ -1.44
PMS1-203ENST00000409593 FSTL4Q6MZW2 842 aa6.06□□□□□ -1.44
PMS1-203ENST00000409593 ZCCHC8Q6NZY4 707 aaKnown RBP6.06□□□□□ -1.44
PMS1-203ENST00000409593 ZCCHC14Q8WYQ9 949 aaKnown RBP6.06□□□□□ -1.44
PMS1-203ENST00000409593 DDX1Q92499 740 aaKnown RBP6.06□□□□□ -1.44
PMS1-203ENST00000409593 FTSJ1Q9UET6 329 aa6.06□□□□□ -1.44
PMS1-203ENST00000409593 NOBOXO60393 691 aa6.05□□□□□ -1.44
PMS1-203ENST00000409593 HIP1RO75146 1068 aa6.05□□□□□ -1.44
PMS1-203ENST00000409593 GLRX3O76003 335 aaKnown RBP6.05□□□□□ -1.44
PMS1-203ENST00000409593 NPTXRO95502 500 aa6.05□□□□□ -1.44
PMS1-203ENST00000409593 SDSP20132 328 aa6.05□□□□□ -1.44
PMS1-203ENST00000409593 TKFCQ3LXA3 575 aa6.05□□□□□ -1.44
PMS1-203ENST00000409593 C16orf86Q6ZW13 317 aa6.05□□□□□ -1.44
PMS1-203ENST00000409593 NOSTRINQ8IVI9 506 aa6.05□□□□□ -1.44
PMS1-203ENST00000409593 SYNPOQ8N3V7 929 aa6.05□□□□□ -1.44
PMS1-203ENST00000409593 STPG3Q8N7X2 389 aa6.05□□□□□ -1.44
PMS1-203ENST00000409593 C20orf173Q96LM9 149 aa6.05□□□□□ -1.44
PMS1-203ENST00000409593 TACO1Q9BSH4 297 aaKnown RBP6.05□□□□□ -1.44
PMS1-203ENST00000409593 RAPGEFL1Q9UHV5 662 aa6.05□□□□□ -1.44
PMS1-203ENST00000409593 C4BPAP04003 597 aaKnown RBP6.04□□□□□ -1.44
PMS1-203ENST00000409593 FLT3P36888 993 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 IRF9Q00978 393 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 NFIXQ14938 502 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 SMAD2Q15796 467 aaKnown RBP6.04□□□□□ -1.44
PMS1-203ENST00000409593 PIK3R6Q5UE93 754 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 PKN3Q6P5Z2 889 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 LILRA6Q6PI73 481 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 FRMD5Q7Z6J6 570 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 FAM124AQ86V42 546 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 IGDCC4Q8TDY8 1250 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 LCORQ96JN0 433 aaPredicted RBP6.04□□□□□ -1.44
PMS1-203ENST00000409593 KRTAP9-8Q9BYQ0 159 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 TMEM168Q9H0V1 697 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 MROH6A6NGR9 719 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 JMJD7P0C870 316 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 CNR2P34972 360 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 TMEM132BQ14DG7 1078 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 SEC23AQ15436 765 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 TM4SF20Q53R12 229 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 BOCQ9BWV1 1114 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 CABP5Q9NP86 173 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 KCNH7Q9NS40 1196 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 RTEL1Q9NZ71 1219 aa6.04□□□□□ -1.44
PMS1-203ENST00000409593 RFPL3O75679 317 aa6.03□□□□□ -1.44
PMS1-203ENST00000409593 MMEP08473 750 aa6.03□□□□□ -1.44
PMS1-203ENST00000409593 PTGS1P23219 599 aa6.03□□□□□ -1.44
PMS1-203ENST00000409593 MC4RP32245 332 aa6.03□□□□□ -1.44
PMS1-203ENST00000409593 UBXN11Q5T124 520 aa6.03□□□□□ -1.44
PMS1-203ENST00000409593 UBE2R2Q712K3 238 aaPredicted RBP6.03□□□□□ -1.44
PMS1-203ENST00000409593 FERMT3Q86UX7 667 aa6.03□□□□□ -1.44
PMS1-203ENST00000409593 CHST14Q8NCH0 376 aa6.03□□□□□ -1.44
PMS1-203ENST00000409593 YTHDC1Q96MU7 727 aaKnown RBP6.03□□□□□ -1.44
PMS1-203ENST00000409593 MAGEC2Q9UBF1 373 aaPredicted RBP6.03□□□□□ -1.44
PMS1-203ENST00000409593 IL18BPO95998 194 aa6.02□□□□□ -1.45
PMS1-203ENST00000409593 AOAHP28039 575 aa6.02□□□□□ -1.45
PMS1-203ENST00000409593 KIAA2012Q0VF49 1180 aa6.02□□□□□ -1.45
PMS1-203ENST00000409593 CFAP100Q494V2 611 aa6.02□□□□□ -1.45
PMS1-203ENST00000409593 BORAQ6PGQ7 559 aa6.02□□□□□ -1.45
PMS1-203ENST00000409593 NOP9Q86U38 636 aaKnown RBP6.02□□□□□ -1.45
PMS1-203ENST00000409593 HIPK4Q8NE63 616 aa6.02□□□□□ -1.45
PMS1-203ENST00000409593 WNK4Q96J92 1243 aa6.02□□□□□ -1.45
PMS1-203ENST00000409593 TEPSINQ96N21 525 aa6.02□□□□□ -1.45
PMS1-203ENST00000409593 KCND1Q9NSA2 647 aa6.02□□□□□ -1.45
PMS1-203ENST00000409593 UCKL1Q9NWZ5 548 aa6.02□□□□□ -1.45
PMS1-203ENST00000409593 DUSP10Q9Y6W6 482 aa6.02□□□□□ -1.45
PMS1-203ENST00000409593 C9orf118A6NHY6 69 aa6.01□□□□□ -1.45
PMS1-203ENST00000409593 FOXP2O15409 715 aa6.01□□□□□ -1.45
PMS1-203ENST00000409593 KPNA6O60684 536 aa6.01□□□□□ -1.45
PMS1-203ENST00000409593 COL6A1P12109 1028 aa6.01□□□□□ -1.45
PMS1-203ENST00000409593 HERVK_113P62684 666 aa6.01□□□□□ -1.45
PMS1-203ENST00000409593 CDCA2Q69YH5 1023 aaPredicted RBP6.01□□□□□ -1.45
PMS1-203ENST00000409593 CNNM4Q6P4Q7 775 aa6.01□□□□□ -1.45
PMS1-203ENST00000409593 NUDT10Q8NFP7 164 aa6.01□□□□□ -1.45
PMS1-203ENST00000409593 ERCC4Q92889 916 aaPredicted RBP6.01□□□□□ -1.45
PMS1-203ENST00000409593 NUDT11Q96G61 164 aa6.01□□□□□ -1.45
PMS1-203ENST00000409593 FEZ1Q99689 392 aa6.01□□□□□ -1.45
PMS1-203ENST00000409593 BARX1Q9HBU1 254 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms