RNA–Protein interactions for RNA: ENST00000409541.5

TMEM139-204, Transcript of transmembrane protein 139, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM139, Length 1,907 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-204ENST00000409541 PKD2L1Q9P0L9 805 aa13.07□□□□□ -0.32
TMEM139-204ENST00000409541 DDX39AO00148 427 aaKnown RBP13.06□□□□□ -0.32
TMEM139-204ENST00000409541 EPHB6O15197 1021 aa13.06□□□□□ -0.32
TMEM139-204ENST00000409541 ZBED4O75132 1171 aa13.06□□□□□ -0.32
TMEM139-204ENST00000409541 MYBP10242 640 aa13.06□□□□□ -0.32
TMEM139-204ENST00000409541 ADAM9Q13443 819 aa13.06□□□□□ -0.32
TMEM139-204ENST00000409541 KNOP1Q1ED39 458 aaKnown RBP13.06□□□□□ -0.32
TMEM139-204ENST00000409541 EDRF1Q3B7T1 1238 aa13.06□□□□□ -0.32
TMEM139-204ENST00000409541 APOBEC3FQ8IUX4 373 aaKnown RBP13.06□□□□□ -0.32
TMEM139-204ENST00000409541 ZKSCAN4Q969J2 545 aaPredicted RBP13.06□□□□□ -0.32
TMEM139-204ENST00000409541 RIT2Q99578 217 aa13.06□□□□□ -0.32
TMEM139-204ENST00000409541 PICK1Q9NRD5 415 aa13.06□□□□□ -0.32
TMEM139-204ENST00000409541 REXO2Q9Y3B8 237 aaKnown RBP13.06□□□□□ -0.32
TMEM139-204ENST00000409541 ZBTB39O15060 712 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 CETN3O15182 167 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 PRPF6O94906 941 aaKnown RBP13.05□□□□□ -0.32
TMEM139-204ENST00000409541 FAM13AO94988 1023 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 GCNT3O95395 438 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 ABL1P00519 1130 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 GAP43P17677 238 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 MUTP22033 750 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 NR2F2P24468 414 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 CYLC1P35663 651 aaPredicted RBP13.05□□□□□ -0.32
TMEM139-204ENST00000409541 ARHGAP25P42331 645 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 BACE1P56817 501 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 MAP3K9P80192 1104 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 GHRHRQ02643 423 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 EPHA7Q15375 998 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 EPM2AIP1Q7L775 607 aaPredicted RBP13.05□□□□□ -0.32
TMEM139-204ENST00000409541 CCDC155Q8N6L0 562 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 SYTL5Q8TDW5 730 aaPredicted RBP13.05□□□□□ -0.32
TMEM139-204ENST00000409541 SMCR8Q8TEV9 937 aaPredicted RBP13.05□□□□□ -0.32
TMEM139-204ENST00000409541 NACC1Q96RE7 527 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 CARD6Q9BX69 1037 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 NHEJ1Q9H9Q4 299 aaPredicted RBP13.05□□□□□ -0.32
TMEM139-204ENST00000409541 AS3MTQ9HBK9 375 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 KCNH7Q9NS40 1196 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 FZD1Q9UP38 647 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.05□□□□□ -0.32
TMEM139-204ENST00000409541 SFI1A8K8P3 1242 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 BCRP11274 1271 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 MARSP56192 900 aaKnown RBP13.05□□□□□ -0.32
TMEM139-204ENST00000409541 ERCC6LQ2NKX8 1250 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 PCNX4Q63HM2 1172 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 B3GNT9Q6UX72 402 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 TRIM59Q8IWR1 403 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 ZC3H3Q8IXZ2 948 aaKnown RBP13.05□□□□□ -0.32
TMEM139-204ENST00000409541 ZNF280CQ8ND82 737 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 BANK1Q8NDB2 785 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 NEK11Q8NG66 645 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 TRPM4Q8TD43 1214 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 ARID3AQ99856 593 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 LXNQ9BS40 222 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 BCAS3Q9H6U6 928 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 CGNQ9P2M7 1197 aaKnown RBP13.05□□□□□ -0.32
TMEM139-204ENST00000409541 WRAP73Q9P2S5 460 aaPredicted RBP13.05□□□□□ -0.32
TMEM139-204ENST00000409541 ZNF112Q9UJU3 913 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 TRAF3IP3Q9Y228 551 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 MRFAP1Q9Y605 127 aa13.05□□□□□ -0.32
TMEM139-204ENST00000409541 VWA5AO00534 786 aa13.04□□□□□ -0.32
TMEM139-204ENST00000409541 IPO7O95373 1038 aaKnown RBP13.04□□□□□ -0.32
TMEM139-204ENST00000409541 PTPRAP18433 802 aa13.04□□□□□ -0.32
TMEM139-204ENST00000409541 EIF2AK2P19525 551 aaKnown RBP13.04□□□□□ -0.32
TMEM139-204ENST00000409541 HOXD13P35453 343 aa13.04□□□□□ -0.32
TMEM139-204ENST00000409541 HERVK_113P62684 666 aa13.04□□□□□ -0.32
TMEM139-204ENST00000409541 RPS6P62753 249 aaKnown RBP13.04□□□□□ -0.32
TMEM139-204ENST00000409541 KRT83P78385 493 aa13.04□□□□□ -0.32
TMEM139-204ENST00000409541 CDK17Q00537 523 aa13.04□□□□□ -0.32
TMEM139-204ENST00000409541 TKFCQ3LXA3 575 aa13.04□□□□□ -0.32
TMEM139-204ENST00000409541 C1orf186Q6ZWK4 172 aa13.04□□□□□ -0.32
TMEM139-204ENST00000409541 NIPA1Q7RTP0 329 aa13.04□□□□□ -0.32
TMEM139-204ENST00000409541 CCDC170Q8IYT3 715 aa13.04□□□□□ -0.32
TMEM139-204ENST00000409541 SLC35F6Q8N357 371 aa13.04□□□□□ -0.32
TMEM139-204ENST00000409541 MYCT1Q8N699 235 aa13.04□□□□□ -0.32
TMEM139-204ENST00000409541 ATG4CQ96DT6 458 aa13.04□□□□□ -0.32
TMEM139-204ENST00000409541 TRERF1Q96PN7 1200 aa13.04□□□□□ -0.32
TMEM139-204ENST00000409541 OLFML3Q9NRN5 406 aa13.04□□□□□ -0.32
TMEM139-204ENST00000409541 MAP3K20Q9NYL2 800 aaKnown RBP13.04□□□□□ -0.32
TMEM139-204ENST00000409541 GGA3Q9NZ52 723 aa13.04□□□□□ -0.32
TMEM139-204ENST00000409541 PNMA2Q9UL42 364 aa13.04□□□□□ -0.32
TMEM139-204ENST00000409541 LRRC53A6NM62 1247 aa13.03□□□□□ -0.32
TMEM139-204ENST00000409541 PDXKO00764 312 aa13.03□□□□□ -0.32
TMEM139-204ENST00000409541 CALUO43852 315 aaPredicted RBP13.03□□□□□ -0.32
TMEM139-204ENST00000409541 FDX1P10109 184 aa13.03□□□□□ -0.32
TMEM139-204ENST00000409541 MRPS9P82933 396 aaKnown RBP13.03□□□□□ -0.32
TMEM139-204ENST00000409541 PPP2R3AQ06190 1150 aa13.03□□□□□ -0.32
TMEM139-204ENST00000409541 KCNMA1Q12791 1236 aa13.03□□□□□ -0.32
TMEM139-204ENST00000409541 MTMR1Q13613 665 aa13.03□□□□□ -0.32
TMEM139-204ENST00000409541 BMT2Q1RMZ1 405 aa13.03□□□□□ -0.32
TMEM139-204ENST00000409541 NSMFQ6X4W1 530 aa13.03□□□□□ -0.32
TMEM139-204ENST00000409541 RRAGAQ7L523 313 aa13.03□□□□□ -0.32
TMEM139-204ENST00000409541 MIER3Q7Z3K6 550 aa13.03□□□□□ -0.32
TMEM139-204ENST00000409541 CACNA2D4Q7Z3S7 1137 aa13.03□□□□□ -0.32
TMEM139-204ENST00000409541 KIAA1328Q86T90 577 aa13.03□□□□□ -0.32
TMEM139-204ENST00000409541 NEK9Q8TD19 979 aa13.03□□□□□ -0.32
TMEM139-204ENST00000409541 WNK4Q96J92 1243 aa13.03□□□□□ -0.32
TMEM139-204ENST00000409541 TAAR1Q96RJ0 339 aa13.03□□□□□ -0.32
TMEM139-204ENST00000409541 HAUS4Q9H6D7 363 aa13.03□□□□□ -0.32
TMEM139-204ENST00000409541 TYW1Q9NV66 732 aaKnown RBP13.03□□□□□ -0.32
TMEM139-204ENST00000409541 GPRC5DQ9NZD1 345 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms