RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 GAP43P17677 238 aa22.89■■□□□ 1.25
USP39-203ENST00000409470 MTMR1Q13613 665 aa22.89■■□□□ 1.25
USP39-203ENST00000409470 PGM5Q15124 567 aa22.89■■□□□ 1.25
USP39-203ENST00000409470 MIER3Q7Z3K6 550 aa22.89■■□□□ 1.25
USP39-203ENST00000409470 BANK1Q8NDB2 785 aa22.89■■□□□ 1.25
USP39-203ENST00000409470 ZNF397Q8NF99 534 aaPredicted RBP22.89■■□□□ 1.25
USP39-203ENST00000409470 CHP1Q99653 195 aa22.89■■□□□ 1.25
USP39-203ENST00000409470 LXNQ9BS40 222 aa22.89■■□□□ 1.25
USP39-203ENST00000409470 AGO4Q9HCK5 861 aaKnown RBP22.89■■□□□ 1.25
USP39-203ENST00000409470 LZTFL1Q9NQ48 299 aa22.89■■□□□ 1.25
USP39-203ENST00000409470 RBBP6Q7Z6E9 1792 aaKnown RBP22.88■■□□□ 1.25
USP39-203ENST00000409470 FRMPD4Q14CM0 1322 aa22.88■■□□□ 1.25
USP39-203ENST00000409470 DDNO94850 711 aaPredicted RBP22.88■■□□□ 1.25
USP39-203ENST00000409470 MYBP10242 640 aa22.88■■□□□ 1.25
USP39-203ENST00000409470 DSG3P32926 999 aa22.88■■□□□ 1.25
USP39-203ENST00000409470 ZBED6P86452 979 aa22.88■■□□□ 1.25
USP39-203ENST00000409470 ADAM9Q13443 819 aa22.88■■□□□ 1.25
USP39-203ENST00000409470 FIGNQ5HY92 759 aa22.88■■□□□ 1.25
USP39-203ENST00000409470 ARHGEF16Q5VV41 709 aa22.88■■□□□ 1.25
USP39-203ENST00000409470 C1orf186Q6ZWK4 172 aa22.88■■□□□ 1.25
USP39-203ENST00000409470 ACRBPQ8NEB7 543 aa22.88■■□□□ 1.25
USP39-203ENST00000409470 NEK9Q8TD19 979 aa22.88■■□□□ 1.25
USP39-203ENST00000409470 IQCDQ96DY2 449 aa22.88■■□□□ 1.25
USP39-203ENST00000409470 FHDC1Q9C0D6 1143 aaPredicted RBP22.88■■□□□ 1.25
USP39-203ENST00000409470 ZNHIT6Q9NWK9 470 aaKnown RBP22.88■■□□□ 1.25
USP39-203ENST00000409470 WRAP73Q9P2S5 460 aaPredicted RBP22.88■■□□□ 1.25
USP39-203ENST00000409470 RIPK3Q9Y572 518 aa22.88■■□□□ 1.25
USP39-203ENST00000409470 SSC5DA1L4H1 1573 aa22.88■■□□□ 1.25
USP39-203ENST00000409470 COG2Q14746 738 aa22.87■■□□□ 1.25
USP39-203ENST00000409470 KNOP1Q1ED39 458 aaKnown RBP22.87■■□□□ 1.25
USP39-203ENST00000409470 EDRF1Q3B7T1 1238 aa22.87■■□□□ 1.25
USP39-203ENST00000409470 NOL9Q5SY16 702 aaKnown RBP22.87■■□□□ 1.25
USP39-203ENST00000409470 SNRNP48Q6IEG0 339 aaKnown RBP22.87■■□□□ 1.25
USP39-203ENST00000409470 EPM2AIP1Q7L775 607 aaPredicted RBP22.87■■□□□ 1.25
USP39-203ENST00000409470 PXMP2Q9NR77 195 aa22.87■■□□□ 1.25
USP39-203ENST00000409470 PARP14Q460N5 1801 aa22.87■■□□□ 1.25
USP39-203ENST00000409470 SFI1A8K8P3 1242 aa22.87■■□□□ 1.25
USP39-203ENST00000409470 CETN3O15182 167 aa22.87■■□□□ 1.25
USP39-203ENST00000409470 PRPF6O94906 941 aaKnown RBP22.87■■□□□ 1.25
USP39-203ENST00000409470 GCNT3O95395 438 aa22.87■■□□□ 1.25
USP39-203ENST00000409470 MMRN2Q9H8L6 949 aa22.87■■□□□ 1.25
USP39-203ENST00000409470 A0A1W2PQJ5 194 aa22.86■■□□□ 1.25
USP39-203ENST00000409470 CASQ1P31415 396 aa22.86■■□□□ 1.25
USP39-203ENST00000409470 BAATQ14032 418 aaPredicted RBP22.86■■□□□ 1.25
USP39-203ENST00000409470 MYCT1Q8N699 235 aa22.86■■□□□ 1.25
USP39-203ENST00000409470 REPS2Q8NFH8 660 aa22.86■■□□□ 1.25
USP39-203ENST00000409470 PDCD2LQ9BRP1 358 aa22.86■■□□□ 1.25
USP39-203ENST00000409470 SIK3Q9Y2K2 1263 aa22.86■■□□□ 1.25
USP39-203ENST00000409470 SAMM50Q9Y512 469 aa22.86■■□□□ 1.25
USP39-203ENST00000409470 PHIPQ8WWQ0 1821 aa22.86■■□□□ 1.25
USP39-203ENST00000409470 DHX15O43143 795 aaKnown RBP22.86■■□□□ 1.25
USP39-203ENST00000409470 OAZ1P54368 228 aa22.86■■□□□ 1.25
USP39-203ENST00000409470 ITGB3BPQ13352 177 aaPredicted RBP22.86■■□□□ 1.25
USP39-203ENST00000409470 CATSPERGQ6ZRH7 1159 aa22.86■■□□□ 1.25
USP39-203ENST00000409470 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.86■■□□□ 1.253e-6■□□□□ 9.8
USP39-203ENST00000409470 PURBQ96QR8 312 aaKnown RBP22.86■■□□□ 1.25
USP39-203ENST00000409470 L2HGDHQ9H9P8 463 aa22.86■■□□□ 1.25
USP39-203ENST00000409470 OLFML3Q9NRN5 406 aa22.86■■□□□ 1.25
USP39-203ENST00000409470 FAM207AQ9NSI2 230 aaPredicted RBP22.86■■□□□ 1.25
USP39-203ENST00000409470 RNF181Q9P0P0 153 aa22.86■■□□□ 1.25
USP39-203ENST00000409470 AFG3L2Q9Y4W6 797 aa22.86■■□□□ 1.25
USP39-203ENST00000409470 EPN1Q9Y6I3 576 aaPredicted RBP22.86■■□□□ 1.25
USP39-203ENST00000409470 ARHGEF35A5YM69 484 aa22.85■■□□□ 1.25
USP39-203ENST00000409470 CALUO43852 315 aaPredicted RBP22.85■■□□□ 1.25
USP39-203ENST00000409470 USP2O75604 605 aaPredicted RBP22.85■■□□□ 1.25
USP39-203ENST00000409470 SLU7O95391 586 aaKnown RBP22.85■■□□□ 1.25
USP39-203ENST00000409470 NR2F2P24468 414 aa22.85■■□□□ 1.25
USP39-203ENST00000409470 WDR59Q6PJI9 974 aa22.85■■□□□ 1.25
USP39-203ENST00000409470 WDR24Q96S15 920 aa22.85■■□□□ 1.25
USP39-203ENST00000409470 BCAS3Q9H6U6 928 aa22.85■■□□□ 1.25
USP39-203ENST00000409470 PARVGQ9HBI0 331 aa22.85■■□□□ 1.25
USP39-203ENST00000409470 ADARB2Q9NS39 739 aaKnown RBP22.85■■□□□ 1.25
USP39-203ENST00000409470 TBC1D22BQ9NU19 505 aa22.85■■□□□ 1.25
USP39-203ENST00000409470 KCND2Q9NZV8 630 aa22.85■■□□□ 1.25
USP39-203ENST00000409470 TRAF3IP3Q9Y228 551 aa22.85■■□□□ 1.25
USP39-203ENST00000409470 POLR2AP24928 1970 aaKnown RBP22.85■■□□□ 1.25
USP39-203ENST00000409470 SBF1O95248 1867 aa22.85■■□□□ 1.25
USP39-203ENST00000409470 URI1O94763 535 aaPredicted RBP22.84■■□□□ 1.25
USP39-203ENST00000409470 NDUFA10O95299 355 aa22.84■■□□□ 1.25
USP39-203ENST00000409470 P4HBP07237 508 aaKnown RBP22.84■■□□□ 1.25
USP39-203ENST00000409470 MEA1Q16626 185 aa22.84■■□□□ 1.25
USP39-203ENST00000409470 BMT2Q1RMZ1 405 aa22.84■■□□□ 1.25
USP39-203ENST00000409470 ARHGAP29Q52LW3 1261 aa22.84■■□□□ 1.25
USP39-203ENST00000409470 ZC3H3Q8IXZ2 948 aaKnown RBP22.84■■□□□ 1.25
USP39-203ENST00000409470 ZNF215Q9UL58 517 aaPredicted RBP22.84■■□□□ 1.25
USP39-203ENST00000409470 ADAMTS5Q9UNA0 930 aa22.84■■□□□ 1.25
USP39-203ENST00000409470 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.84■■□□□ 1.25
USP39-203ENST00000409470 A0A0U1RQJ8 604 aa22.84■■□□□ 1.25
USP39-203ENST00000409470 PDXKO00764 312 aa22.84■■□□□ 1.25
USP39-203ENST00000409470 KIF5CO60282 957 aa22.84■■□□□ 1.25
USP39-203ENST00000409470 HOXD13P35453 343 aa22.84■■□□□ 1.25
USP39-203ENST00000409470 MARSP56192 900 aaKnown RBP22.84■■□□□ 1.25
USP39-203ENST00000409470 ATRIPQ8WXE1 791 aa22.84■■□□□ 1.25
USP39-203ENST00000409470 DCPSQ96C86 337 aaKnown RBP22.84■■□□□ 1.25
USP39-203ENST00000409470 ZSWIM4Q9H7M6 989 aa22.84■■□□□ 1.25
USP39-203ENST00000409470 ZNF214Q9UL59 606 aaPredicted RBP22.84■■□□□ 1.25
USP39-203ENST00000409470 COL11A1P12107 1806 aaPredicted RBP22.83■■□□□ 1.25
USP39-203ENST00000409470 TESPA1A2RU30 521 aaPredicted RBP22.83■■□□□ 1.25
USP39-203ENST00000409470 FANCGO15287 622 aa22.83■■□□□ 1.25
USP39-203ENST00000409470 TMEM132BQ14DG7 1078 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms