RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 PNMA6EA0A0J9YXQ4 647 aa7.95□□□□□ -1.14
SCN9A-202ENST00000409435 SH3BP5O60239 455 aa7.95□□□□□ -1.14
SCN9A-202ENST00000409435 ATXN8OSP0DMR3 200 aa7.95□□□□□ -1.14
SCN9A-202ENST00000409435 RAD51AP2Q09MP3 1159 aa7.95□□□□□ -1.14
SCN9A-202ENST00000409435 SURF1Q15526 300 aa7.95□□□□□ -1.14
SCN9A-202ENST00000409435 GLYCTKQ8IVS8 523 aa7.95□□□□□ -1.14
SCN9A-202ENST00000409435 AFAP1L1Q8TED9 768 aa7.95□□□□□ -1.14
SCN9A-202ENST00000409435 SEC62Q99442 399 aaKnown RBP7.95□□□□□ -1.14
SCN9A-202ENST00000409435 MAGED2Q9UNF1 606 aaPredicted RBP7.95□□□□□ -1.14
SCN9A-202ENST00000409435 MAGEB2O15479 319 aa7.95□□□□□ -1.14
SCN9A-202ENST00000409435 INHAP05111 366 aa7.95□□□□□ -1.14
SCN9A-202ENST00000409435 CCL5P13501 91 aa7.95□□□□□ -1.14
SCN9A-202ENST00000409435 ELNP15502 786 aa7.95□□□□□ -1.14
SCN9A-202ENST00000409435 ADORA2AP29274 412 aa7.95□□□□□ -1.14
SCN9A-202ENST00000409435 MYL7Q01449 175 aa7.95□□□□□ -1.14
SCN9A-202ENST00000409435 LONRF3Q496Y0 759 aa7.95□□□□□ -1.14
SCN9A-202ENST00000409435 EPHA10Q5JZY3 1008 aa7.95□□□□□ -1.14
SCN9A-202ENST00000409435 IQUBQ8NA54 791 aa7.95□□□□□ -1.14
SCN9A-202ENST00000409435 GABPB2Q8TAK5 448 aaPredicted RBP7.95□□□□□ -1.14
SCN9A-202ENST00000409435 PRKAB2O43741 272 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 ZFXP17010 805 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-202ENST00000409435 HTRA3P83110 453 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 FPGSQ05932 587 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 CCDC15Q0P6D6 951 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 CUL4BQ13620 913 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 ZKSCAN8Q15776 578 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-202ENST00000409435 KIAA0753Q2KHM9 967 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 CXorf38Q8TB03 319 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 TBC1D31Q96DN5 1066 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 ZDHHC15Q96MV8 337 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 USP26Q9BXU7 913 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 RASAL2Q9UJF2 1139 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 SNAP23O00161 211 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 XYLBO75191 536 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 DNA2P51530 1060 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 STAT5BP51692 787 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 NUCB1Q02818 461 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 ITKQ08881 620 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 PTGISQ16647 500 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 MAPK6Q16659 721 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 IFI16Q16666 785 aaKnown RBP7.94□□□□□ -1.14
SCN9A-202ENST00000409435 CCDC14Q49A88 953 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 TMCO4Q5TGY1 634 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 CCDC84Q86UT8 332 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-202ENST00000409435 GOLGA5Q8TBA6 731 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 JADE2Q9NQC1 790 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 RNF186Q9NXI6 227 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 VWDEQ8N2E2 1590 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 STXBP3O00186 592 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 SCG2P13521 617 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 FOSL2P15408 326 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 SYN1P17600 705 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 ADCYAP1R1P41586 468 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 ERCC6LQ2NKX8 1250 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 GIMAP6Q6P9H5 292 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 PSRC1Q6PGN9 363 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-202ENST00000409435 TADA2BQ86TJ2 420 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 CCDC26Q8TAB7 109 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 AFG1LQ8WV93 481 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 SLC9A2Q9UBY0 812 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 RWDD3Q9Y3V2 267 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 MROH2AA6NES4 1674 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 ZNF536O15090 1300 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 TBKBP1A7MCY6 615 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 H7C4K7 107 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 NDUFAB1O14561 156 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 NDC80O14777 642 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 HUS1O60921 280 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 CAVIN2O95810 425 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 SFNP31947 248 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 RILPL1Q5EBL4 403 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 FAM178BQ8IXR5 827 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 DACT3Q96B18 629 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-202ENST00000409435 FAN1Q9Y2M0 1017 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 SYKP43405 635 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 CCL23P55773 120 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 CNNM4Q6P4Q7 775 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 MOB2Q70IA6 237 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 ATP2A3Q93084 1043 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 ABTB1Q969K4 478 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-202ENST00000409435 MTRQ99707 1265 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 LRRC4Q9HBW1 653 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 TTLL3Q9Y4R7 772 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 TACC3Q9Y6A5 838 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 TLL2Q9Y6L7 1015 aa7.94□□□□□ -1.14
SCN9A-202ENST00000409435 BCL9O00512 1426 aa7.93□□□□□ -1.14
SCN9A-202ENST00000409435 ZBTB5O15062 677 aa7.93□□□□□ -1.14
SCN9A-202ENST00000409435 PGK2P07205 417 aa7.93□□□□□ -1.14
SCN9A-202ENST00000409435 IRX4P78413 519 aa7.93□□□□□ -1.14
SCN9A-202ENST00000409435 AP3B2Q13367 1082 aa7.93□□□□□ -1.14
SCN9A-202ENST00000409435 RASIP1Q5U651 963 aa7.93□□□□□ -1.14
SCN9A-202ENST00000409435 CABP7Q86V35 215 aa7.93□□□□□ -1.14
SCN9A-202ENST00000409435 GPBP1Q86WP2 473 aa7.93□□□□□ -1.14
SCN9A-202ENST00000409435 SPATS2Q86XZ4 545 aaKnown RBP7.93□□□□□ -1.14
SCN9A-202ENST00000409435 SEPT1Q8WYJ6 367 aa7.93□□□□□ -1.14
SCN9A-202ENST00000409435 SYMPKQ92797 1274 aaKnown RBP7.93□□□□□ -1.14
SCN9A-202ENST00000409435 RAB3IPQ96QF0 476 aaPredicted RBP7.93□□□□□ -1.14
SCN9A-202ENST00000409435 PLA2G12BQ9BX93 195 aa7.93□□□□□ -1.14
SCN9A-202ENST00000409435 PIH1D3Q9NQM4 214 aaKnown RBP7.93□□□□□ -1.14
SCN9A-202ENST00000409435 ERAP1Q9NZ08 941 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 659.5 ms