RNA–Protein interactions for RNA: ENST00000409299.7

PXMP4-203, Transcript of peroxisomal membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PXMP4, Length 5,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-203ENST00000409299 SDCCAG3Q96C92 435 aa13.18□□□□□ -0.3
PXMP4-203ENST00000409299 FAM170AA1A519 330 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 TLR3O15455 904 aaKnown RBP13.17□□□□□ -0.3
PXMP4-203ENST00000409299 TTI1O43156 1089 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 MOCS3O95396 460 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 BAG2O95816 211 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 MYL3P08590 195 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 SURF1Q15526 300 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 RHOT2Q8IXI1 618 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 MID2Q9UJV3 735 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 TTLL3Q9Y4R7 772 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 PLEKHG2Q9H7P9 1386 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 USP17L5A8MUK1 530 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 STMN1P16949 149 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 EIF2AK2P19525 551 aaKnown RBP13.17□□□□□ -0.3
PXMP4-203ENST00000409299 TMTC3Q6ZXV5 915 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 SIRT2Q8IXJ6 389 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 RUBCNQ92622 972 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 CCDC127Q96BQ5 260 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 OTUD5Q96G74 571 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 TRIM56Q9BRZ2 755 aaKnown RBP13.17□□□□□ -0.3
PXMP4-203ENST00000409299 IGKV5-2P06315 115 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 MSH2P43246 934 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 BSPRYQ5W0U4 402 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 KCTD16Q68DU8 428 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 TRIM68Q6AZZ1 485 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 LRGUKQ96M69 825 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 SAMSN1Q9NSI8 373 aaKnown RBP13.17□□□□□ -0.3
PXMP4-203ENST00000409299 PPP1R9AQ9ULJ8 1098 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 SGK1O00141 431 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 TTC4O95801 387 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 VPS41P49754 854 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 NDST4Q9H3R1 872 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 HOXC10Q9NYD6 342 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 CDHR2Q9BYE9 1310 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 NR1D1P20393 614 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 MXD3Q9BW11 206 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 GCNT4Q9P109 453 aa13.17□□□□□ -0.3
PXMP4-203ENST00000409299 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.17□□□□□ -0.3
PXMP4-203ENST00000409299 MCF2LO15068 1137 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 DHX9Q08211 1270 aaKnown RBP13.16□□□□□ -0.3
PXMP4-203ENST00000409299 PROM2Q8N271 834 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 ANKRD13CQ8N6S4 541 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 CEP170P1Q96L14 293 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 PPP1R16BQ96T49 567 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 EMILIN3Q9NT22 766 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 EPS15L1Q9UBC2 864 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 ABCA9Q8IUA7 1624 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 HSPA8P11142 646 aaKnown RBP13.16□□□□□ -0.3
PXMP4-203ENST00000409299 EPHA10Q5JZY3 1008 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 RNF207Q6ZRF8 634 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 DDX27Q96GQ7 796 aaKnown RBP13.16□□□□□ -0.3
PXMP4-203ENST00000409299 NCAPGQ9BPX3 1015 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 OSBPL5Q9H0X9 879 aaPredicted RBP13.16□□□□□ -0.3
PXMP4-203ENST00000409299 DISC1Q9NRI5 854 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 FAM196BA6NMK8 535 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 HNRNPDLO14979 420 aaKnown RBP13.16□□□□□ -0.3
PXMP4-203ENST00000409299 RAB44Q7Z6P3 723 aaPredicted RBP13.16□□□□□ -0.3
PXMP4-203ENST00000409299 TRIM4Q9C037 500 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 IPO5O00410 1097 aaKnown RBP13.16□□□□□ -0.3
PXMP4-203ENST00000409299 LARGE1O95461 756 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 HOXD10P28358 340 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 HOXA13P31271 388 aaPredicted RBP13.16□□□□□ -0.3
PXMP4-203ENST00000409299 DR1Q01658 176 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 KRT31Q15323 416 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 FAM83BQ5T0W9 1011 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 KIAA1841Q6NSI8 718 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 ADAT2Q7Z6V5 191 aaKnown RBP13.16□□□□□ -0.3
PXMP4-203ENST00000409299 FAM133AQ8N9E0 248 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 PTPRMP28827 1452 aa13.16□□□□□ -0.3
PXMP4-203ENST00000409299 PODXLO00592 558 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 SRRM1Q8IYB3 904 aaKnown RBP13.15□□□□□ -0.3
PXMP4-203ENST00000409299 MARCH10Q8NA82 808 aaPredicted RBP13.15□□□□□ -0.3
PXMP4-203ENST00000409299 CCDC68Q9H2F9 335 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 ANGPTL2Q9UKU9 493 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 ATP8A1Q9Y2Q0 1164 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 PTPN22Q9Y2R2 807 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 POC1B-GALNT4F8VUJ3 575 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 RFC1P35251 1148 aaPredicted RBP13.15□□□□□ -0.3
PXMP4-203ENST00000409299 KAZNQ674X7 775 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 RNF168Q8IYW5 571 aaPredicted RBP13.15□□□□□ -0.3
PXMP4-203ENST00000409299 DRC3Q9H069 523 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 KMT5AQ9NQR1 393 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 LMNAP02545 664 aaKnown RBP13.15□□□□□ -0.3
PXMP4-203ENST00000409299 KRT1P04264 644 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 PNMA6AP0CW24 399 aaPredicted RBP13.15□□□□□ -0.3
PXMP4-203ENST00000409299 SERPINB6P35237 376 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 PLTPP55058 493 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 UBE2SQ16763 222 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 FGFR1OP2Q9NVK5 253 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 CEP72Q9P209 647 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 RASGRF2O14827 1237 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 CTNND1O60716 968 aaKnown RBP13.15□□□□□ -0.3
PXMP4-203ENST00000409299 PLCG1P19174 1290 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 COG7P83436 770 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 GOLGA8FQ08AF8 430 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 GOLGA8DPQ0D2H9 430 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 MTERF2Q49AM1 385 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 NAA35Q5VZE5 725 aa13.15□□□□□ -0.3
PXMP4-203ENST00000409299 PPP1R18Q6NYC8 613 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms