RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 KRR1Q13601 381 aaKnown RBP13.03□□□□□ -0.32
SHANK2-203ENST00000409161 MYLK4Q86YV6 388 aaPredicted RBP13.03□□□□□ -0.32
SHANK2-203ENST00000409161 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.03□□□□□ -0.32
SHANK2-203ENST00000409161 TBK1Q9UHD2 729 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 MTMR6Q9Y217 621 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 RBM41Q96IZ5 413 aaKnown RBP13.03□□□□□ -0.32
SHANK2-203ENST00000409161 CDHR1Q96JP9 859 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 ACCSQ96QU6 501 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 EDEM3Q9BZQ6 932 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 GSNP06396 782 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 CARSP49589 748 aaKnown RBP13.03□□□□□ -0.32
SHANK2-203ENST00000409161 VSTM4Q8IW00 320 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 SPTLC3Q9NUV7 552 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 MYOM2P54296 1465 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 SKOR1P84550 965 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 DAB2P98082 770 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 SLC12A1Q13621 1099 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 RSRC2Q7L4I2 434 aaKnown RBP13.03□□□□□ -0.32
SHANK2-203ENST00000409161 SNX25Q9H3E2 840 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 SLC39A2Q9NP94 309 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 PIK3R2O00459 728 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 KRT75O95678 551 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 CDH2P19022 906 aaPredicted RBP13.03□□□□□ -0.32
SHANK2-203ENST00000409161 DEFA1P59665 94 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 DEFA3P59666 94 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 RBL2Q08999 1139 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 PARP9Q8IXQ6 854 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 USP28Q96RU2 1077 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 KDM4CQ9H3R0 1056 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 NRBP2Q9NSY0 501 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 ZNF229Q9UJW7 825 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 PCDHA13Q9Y5I0 950 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 GOLGA8JA6NMD2 632 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 SEMA3FQ13275 785 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 E2F4Q16254 413 aa13.03□□□□□ -0.32
SHANK2-203ENST00000409161 EIF6P56537 245 aaKnown RBP13.02□□□□□ -0.32
SHANK2-203ENST00000409161 TMEM259Q4ZIN3 620 aa13.02□□□□□ -0.32
SHANK2-203ENST00000409161 DCAF15Q66K64 600 aa13.02□□□□□ -0.32
SHANK2-203ENST00000409161 CROCC2H7BZ55 1655 aa13.02□□□□□ -0.32
SHANK2-203ENST00000409161 RASA4BC9J798 803 aa13.02□□□□□ -0.32
SHANK2-203ENST00000409161 RASA4O43374 803 aa13.02□□□□□ -0.32
SHANK2-203ENST00000409161 ZBED1O96006 694 aa13.02□□□□□ -0.32
SHANK2-203ENST00000409161 HSPD1P10809 573 aaKnown RBP13.02□□□□□ -0.32
SHANK2-203ENST00000409161 GCKRQ14397 625 aa13.02□□□□□ -0.32
SHANK2-203ENST00000409161 ANO3Q9BYT9 981 aa13.02□□□□□ -0.32
SHANK2-203ENST00000409161 EML4Q9HC35 981 aaKnown RBP13.02□□□□□ -0.32
SHANK2-203ENST00000409161 PPARGC1AQ9UBK2 798 aaKnown RBP13.02□□□□□ -0.32
SHANK2-203ENST00000409161 GOLGA8IPA6NC78 632 aa13.02□□□□□ -0.33
SHANK2-203ENST00000409161 C4BPBP20851 252 aa13.02□□□□□ -0.33
SHANK2-203ENST00000409161 CFLARO15519 480 aa13.02□□□□□ -0.33
SHANK2-203ENST00000409161 TSTA3Q13630 321 aaPredicted RBP13.02□□□□□ -0.33
SHANK2-203ENST00000409161 CYTH2Q99418 400 aa13.02□□□□□ -0.33
SHANK2-203ENST00000409161 GMNCA6NCL1 334 aa13.02□□□□□ -0.33
SHANK2-203ENST00000409161 COPS2P61201 443 aa13.02□□□□□ -0.33
SHANK2-203ENST00000409161 METTL23Q86XA0 190 aa13.02□□□□□ -0.33
SHANK2-203ENST00000409161 MLXIPQ9HAP2 919 aa13.02□□□□□ -0.33
SHANK2-203ENST00000409161 TARSL2A2RTX5 802 aaKnown RBP13.02□□□□□ -0.33
SHANK2-203ENST00000409161 KRT87PA6NCN2 255 aa13.02□□□□□ -0.33
SHANK2-203ENST00000409161 LRRIQ4A6NIV6 560 aa13.02□□□□□ -0.33
SHANK2-203ENST00000409161 IL10P22301 178 aa13.02□□□□□ -0.33
SHANK2-203ENST00000409161 ALDH1B1P30837 517 aa13.02□□□□□ -0.33
SHANK2-203ENST00000409161 ZC3H12BQ5HYM0 836 aaKnown RBP13.02□□□□□ -0.33
SHANK2-203ENST00000409161 PROM2Q8N271 834 aa13.02□□□□□ -0.33
SHANK2-203ENST00000409161 CFAP36Q96G28 342 aa13.02□□□□□ -0.33
SHANK2-203ENST00000409161 PLAAQ9Y263 795 aa13.02□□□□□ -0.33
SHANK2-203ENST00000409161 HLA-DPA1P20036 260 aa13.02□□□□□ -0.33
SHANK2-203ENST00000409161 EFTUD2Q15029 972 aaKnown RBP eCLIP13.02□□□□□ -0.331e-6■■■□□ 15.8
SHANK2-203ENST00000409161 PKD2L2Q9NZM6 624 aa13.02□□□□□ -0.33
SHANK2-203ENST00000409161 DBNDD2Q9BQY9 259 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 TESPA1A2RU30 521 aaPredicted RBP13.01□□□□□ -0.33
SHANK2-203ENST00000409161 NAA35Q5VZE5 725 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 PNMA1Q8ND90 353 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 WDR11Q9BZH6 1224 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 GPBP1L1Q9HC44 474 aaPredicted RBP13.01□□□□□ -0.33
SHANK2-203ENST00000409161 GGPS1O95749 300 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 TIMM10P62072 90 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 DDX42Q86XP3 938 aaKnown RBP eCLIP13.01□□□□□ -0.33
SHANK2-203ENST00000409161 SNX19Q92543 992 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 BTBD6Q96KE9 485 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 ADAM21Q9UKJ8 722 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 ENC1O14682 589 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 HSPA2P54652 639 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 ATP11BQ9Y2G3 1177 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 C16orf96A6NNT2 1141 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 PDHA1P08559 390 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 CAPRIN1Q14444 709 aaKnown RBP13.01□□□□□ -0.33
SHANK2-203ENST00000409161 NSMFQ6X4W1 530 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 CCNYQ8ND76 341 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 PARD3BQ8TEW8 1205 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 IP6K1Q92551 441 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 NACC1Q96RE7 527 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 BPIFA3Q9BQP9 254 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 NOVA2Q9UNW9 492 aaKnown RBP13.01□□□□□ -0.33
SHANK2-203ENST00000409161 PRR23D1E9PI22 279 aaPredicted RBP13.01□□□□□ -0.33
SHANK2-203ENST00000409161 RIMBP2O15034 1052 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 PRR23D2P0DMB1 279 aaPredicted RBP13.01□□□□□ -0.33
SHANK2-203ENST00000409161 TESK2Q96S53 571 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 KIAA1024Q9UPX6 916 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 A0A0G2JND7 137 aa13.01□□□□□ -0.33
SHANK2-203ENST00000409161 ACSL3O95573 720 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms