RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 ANAPC15P60006 121 aa8.75□□□□□ -1.01
PTPN12-202ENST00000407343 RNF219Q5W0B1 726 aaPredicted RBP8.75□□□□□ -1.01
PTPN12-202ENST00000407343 OLFML2BQ68BL8 750 aa8.75□□□□□ -1.01
PTPN12-202ENST00000407343 MCTP1Q6DN14 999 aa8.75□□□□□ -1.01
PTPN12-202ENST00000407343 TOE1Q96GM8 510 aaKnown RBP8.75□□□□□ -1.01
PTPN12-202ENST00000407343 RNF38Q9H0F5 515 aa8.75□□□□□ -1.01
PTPN12-202ENST00000407343 DDX56Q9NY93 547 aaKnown RBP8.75□□□□□ -1.01
PTPN12-202ENST00000407343 LRRC10BA6NIK2 292 aa8.74□□□□□ -1.01
PTPN12-202ENST00000407343 HIP1RO75146 1068 aa8.74□□□□□ -1.01
PTPN12-202ENST00000407343 MMEP08473 750 aa8.74□□□□□ -1.01
PTPN12-202ENST00000407343 CPEP16870 476 aa8.74□□□□□ -1.01
PTPN12-202ENST00000407343 AOAHP28039 575 aa8.74□□□□□ -1.01
PTPN12-202ENST00000407343 NCKAP1LP55160 1127 aa8.74□□□□□ -1.01
PTPN12-202ENST00000407343 HERVK_113P62684 666 aa8.74□□□□□ -1.01
PTPN12-202ENST00000407343 PHC1P78364 1004 aa8.74□□□□□ -1.01
PTPN12-202ENST00000407343 TMPRSS15P98073 1019 aa8.74□□□□□ -1.01
PTPN12-202ENST00000407343 CACNB2Q08289 660 aaPredicted RBP8.74□□□□□ -1.01
PTPN12-202ENST00000407343 MESP2Q0VG99 397 aa8.74□□□□□ -1.01
PTPN12-202ENST00000407343 DBPQ10586 325 aaPredicted RBP8.74□□□□□ -1.01
PTPN12-202ENST00000407343 SART3Q15020 963 aaKnown RBP8.74□□□□□ -1.01
PTPN12-202ENST00000407343 ATP13A4Q4VNC1 1196 aa8.74□□□□□ -1.01
PTPN12-202ENST00000407343 XP32Q5T750 250 aa8.74□□□□□ -1.01
PTPN12-202ENST00000407343 CD276Q5ZPR3 534 aa8.74□□□□□ -1.01
PTPN12-202ENST00000407343 NECAB2Q7Z6G3 386 aa8.74□□□□□ -1.01
PTPN12-202ENST00000407343 SPATS2Q86XZ4 545 aaKnown RBP8.74□□□□□ -1.01
PTPN12-202ENST00000407343 COG1Q8WTW3 980 aa8.74□□□□□ -1.01
PTPN12-202ENST00000407343 FOXRED1Q96CU9 486 aaPredicted RBP8.74□□□□□ -1.01
PTPN12-202ENST00000407343 SGPP1Q9BX95 441 aa8.74□□□□□ -1.01
PTPN12-202ENST00000407343 MS4A5Q9H3V2 200 aa8.74□□□□□ -1.01
PTPN12-202ENST00000407343 VTA1Q9NP79 307 aa8.74□□□□□ -1.01
PTPN12-202ENST00000407343 MPIG6BO95866 241 aa8.73□□□□□ -1.01
PTPN12-202ENST00000407343 FNTBP49356 437 aa8.73□□□□□ -1.01
PTPN12-202ENST00000407343 OCRLQ01968 901 aa8.73□□□□□ -1.01
PTPN12-202ENST00000407343 TMEM132BQ14DG7 1078 aa8.73□□□□□ -1.01
PTPN12-202ENST00000407343 TERF2Q15554 542 aa8.73□□□□□ -1.01
PTPN12-202ENST00000407343 LIPIQ6XZB0 460 aa8.73□□□□□ -1.01
PTPN12-202ENST00000407343 RTN4RL1Q86UN2 441 aaPredicted RBP8.73□□□□□ -1.01
PTPN12-202ENST00000407343 CLRN3Q8NCR9 226 aa8.73□□□□□ -1.01
PTPN12-202ENST00000407343 ASB15Q8WXK1 588 aa8.73□□□□□ -1.01
PTPN12-202ENST00000407343 ACSS2Q9NR19 701 aa8.73□□□□□ -1.01
PTPN12-202ENST00000407343 WASHC2CQ9Y4E1 1318 aa8.73□□□□□ -1.01
PTPN12-202ENST00000407343 PRAMEF25A6NGN4 478 aa8.72□□□□□ -1.01
PTPN12-202ENST00000407343 FOXP2O15409 715 aa8.72□□□□□ -1.01
PTPN12-202ENST00000407343 PRKD3O94806 890 aa8.72□□□□□ -1.01
PTPN12-202ENST00000407343 NCAM1P13591 858 aa8.72□□□□□ -1.01
PTPN12-202ENST00000407343 ZNF174Q15697 407 aa8.72□□□□□ -1.01
PTPN12-202ENST00000407343 BRDTQ58F21 947 aaPredicted RBP8.72□□□□□ -1.01
PTPN12-202ENST00000407343 GPR158Q5T848 1215 aa8.72□□□□□ -1.01
PTPN12-202ENST00000407343 EP400NLQ6ZTU2 488 aa8.72□□□□□ -1.01
PTPN12-202ENST00000407343 MZB1Q8WU39 189 aa8.72□□□□□ -1.01
PTPN12-202ENST00000407343 SLC5A5Q92911 643 aa8.72□□□□□ -1.01
PTPN12-202ENST00000407343 TYW1Q9NV66 732 aaKnown RBP8.72□□□□□ -1.01
PTPN12-202ENST00000407343 SIRT5Q9NXA8 310 aa8.72□□□□□ -1.01
PTPN12-202ENST00000407343 LCHNA4D1U4 455 aa8.71□□□□□ -1.02
PTPN12-202ENST00000407343 K7ESF4 209 aa8.71□□□□□ -1.02
PTPN12-202ENST00000407343 PPM1GO15355 546 aaPredicted RBP8.71□□□□□ -1.02
PTPN12-202ENST00000407343 SEMA7AO75326 666 aa8.71□□□□□ -1.02
PTPN12-202ENST00000407343 KRT1P04264 644 aa8.71□□□□□ -1.02
PTPN12-202ENST00000407343 CYP17A1P05093 508 aa8.71□□□□□ -1.02
PTPN12-202ENST00000407343 MC4RP32245 332 aa8.71□□□□□ -1.02
PTPN12-202ENST00000407343 MTMR1Q13613 665 aa8.71□□□□□ -1.02
PTPN12-202ENST00000407343 FAM50AQ14320 339 aaKnown RBP8.71□□□□□ -1.02
PTPN12-202ENST00000407343 BROXQ5VW32 411 aa8.71□□□□□ -1.02
PTPN12-202ENST00000407343 B3GNT8Q7Z7M8 397 aa8.71□□□□□ -1.02
PTPN12-202ENST00000407343 PCIF1Q9H4Z3 704 aa8.71□□□□□ -1.02
PTPN12-202ENST00000407343 TOMM22Q9NS69 142 aa8.71□□□□□ -1.02
PTPN12-202ENST00000407343 HOMER2Q9NSB8 354 aa8.71□□□□□ -1.02
PTPN12-202ENST00000407343 SLC5A4Q9NY91 659 aa8.71□□□□□ -1.02
PTPN12-202ENST00000407343 ALG1L2C9J202 215 aa8.7□□□□□ -1.02
PTPN12-202ENST00000407343 N4BP3O15049 544 aa8.7□□□□□ -1.02
PTPN12-202ENST00000407343 GUCY2FP51841 1108 aa8.7□□□□□ -1.02
PTPN12-202ENST00000407343 ERVK-21P61565 698 aa8.7□□□□□ -1.02
PTPN12-202ENST00000407343 LRRC32Q14392 662 aa8.7□□□□□ -1.02
PTPN12-202ENST00000407343 RTP5Q14D33 572 aa8.7□□□□□ -1.02
PTPN12-202ENST00000407343 EPHA7Q15375 998 aa8.7□□□□□ -1.02
PTPN12-202ENST00000407343 ZNF610Q8N9Z0 462 aa8.7□□□□□ -1.02
PTPN12-202ENST00000407343 FBXO15Q8NCQ5 510 aaPredicted RBP8.7□□□□□ -1.02
PTPN12-202ENST00000407343 SMARCC2Q8TAQ2 1214 aa8.7□□□□□ -1.02
PTPN12-202ENST00000407343 LOC100996750A0A140TA64 210 aa8.69□□□□□ -1.02
PTPN12-202ENST00000407343 ZNF839A8K0R7 811 aa8.69□□□□□ -1.02
PTPN12-202ENST00000407343 GOLGA6L22H0YM25 854 aa8.69□□□□□ -1.02
PTPN12-202ENST00000407343 KATNA1O75449 491 aa8.69□□□□□ -1.02
PTPN12-202ENST00000407343 PDGFRBP09619 1106 aa8.69□□□□□ -1.02
PTPN12-202ENST00000407343 TMEM253P0C7T8 217 aa8.69□□□□□ -1.02
PTPN12-202ENST00000407343 DDB1Q16531 1140 aa8.69□□□□□ -1.02
PTPN12-202ENST00000407343 CD300LDQ6UXZ3 194 aa8.69□□□□□ -1.02
PTPN12-202ENST00000407343 C11orf74Q86VG3 221 aa8.69□□□□□ -1.02
PTPN12-202ENST00000407343 CILP2Q8IUL8 1156 aa8.69□□□□□ -1.02
PTPN12-202ENST00000407343 TMEFF1Q8IYR6 380 aa8.69□□□□□ -1.02
PTPN12-202ENST00000407343 DTX3Q8N9I9 347 aa8.69□□□□□ -1.02
PTPN12-202ENST00000407343 GBP4Q96PP9 640 aa8.69□□□□□ -1.02
PTPN12-202ENST00000407343 GORASP1Q9BQQ3 440 aa8.69□□□□□ -1.02
PTPN12-202ENST00000407343 AMNQ9BXJ7 453 aa8.69□□□□□ -1.02
PTPN12-202ENST00000407343 KRTAP4-6Q9BYQ5 205 aa8.69□□□□□ -1.02
PTPN12-202ENST00000407343 ASPSCR1Q9BZE9 553 aa8.69□□□□□ -1.02
PTPN12-202ENST00000407343 SEMA4AQ9H3S1 761 aa8.69□□□□□ -1.02
PTPN12-202ENST00000407343 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.68□□□□□ -1.02
PTPN12-202ENST00000407343 ULK1O75385 1050 aa8.68□□□□□ -1.02
PTPN12-202ENST00000407343 ITGA1P56199 1179 aa8.68□□□□□ -1.02
PTPN12-202ENST00000407343 DLG4P78352 724 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms