RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 IREB2P48200 963 aaKnown RBP12.96□□□□□ -0.34
SMCR8-201ENST00000406438 GIMAP8Q8ND71 665 aaPredicted RBP12.96□□□□□ -0.34
SMCR8-201ENST00000406438 RPSAP08865 295 aaKnown RBP12.96□□□□□ -0.34
SMCR8-201ENST00000406438 PTH1RQ03431 593 aa12.96□□□□□ -0.34
SMCR8-201ENST00000406438 PSMD2Q13200 908 aa12.96□□□□□ -0.34
SMCR8-201ENST00000406438 TAF1BQ53T94 588 aaPredicted RBP12.96□□□□□ -0.34
SMCR8-201ENST00000406438 ANLNQ9NQW6 1124 aa12.96□□□□□ -0.34
SMCR8-201ENST00000406438 RNF14Q9UBS8 474 aa12.96□□□□□ -0.34
SMCR8-201ENST00000406438 SCOCQ9UIL1 159 aa12.96□□□□□ -0.34
SMCR8-201ENST00000406438 TCOF1Q13428 1488 aaKnown RBP12.96□□□□□ -0.34
SMCR8-201ENST00000406438 MYH9P35579 1960 aaKnown RBP12.96□□□□□ -0.34
SMCR8-201ENST00000406438 GFPT2O94808 682 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 ZBED1O96006 694 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 TESK2Q96S53 571 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 SCINQ9Y6U3 715 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 MAPK13O15264 365 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 CTNND1O60716 968 aaKnown RBP12.95□□□□□ -0.34
SMCR8-201ENST00000406438 BMP3P12645 472 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 PPP4R3CPQ6ZMV5 832 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 RNF207Q6ZRF8 634 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 LCA5Q86VQ0 697 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 SERPINB13Q9UIV8 391 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 CDC23Q9UJX2 597 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 CLRN2A0PK11 232 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 TCP11X2Q5H9J9 407 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 ZBTB33Q86T24 672 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 FBXO18Q8NFZ0 1043 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 ALKBH8Q96BT7 664 aaKnown RBP12.95□□□□□ -0.34
SMCR8-201ENST00000406438 ZBTB18Q99592 522 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 TRIM33Q9UPN9 1127 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 KDM5DQ9BY66 1539 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 MARK3P27448 753 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 GNL1P36915 607 aaPredicted RBP12.95□□□□□ -0.34
SMCR8-201ENST00000406438 CAPRIN1Q14444 709 aaKnown RBP12.95□□□□□ -0.34
SMCR8-201ENST00000406438 SYDE2Q5VT97 1194 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 SLFN12LQ6IEE8 588 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 PI4KBQ9UBF8 816 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 RWDD2AQ9UIY3 292 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 SUGT1Q9Y2Z0 365 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 K7ERI5 159 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 PPP1R12AO14974 1030 aaPredicted RBP12.95□□□□□ -0.34
SMCR8-201ENST00000406438 CLIC2O15247 247 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 BRD2P25440 801 aaKnown RBP12.95□□□□□ -0.34
SMCR8-201ENST00000406438 FAM133AQ8N9E0 248 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 SAMD9Q5K651 1589 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 PHLPP2Q6ZVD8 1323 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 RECQLP46063 649 aaPredicted RBP12.95□□□□□ -0.34
SMCR8-201ENST00000406438 ENC1O14682 589 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 KRT39Q6A163 491 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 PCIF1Q9H4Z3 704 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 GREM2Q9H772 168 aa12.95□□□□□ -0.34
SMCR8-201ENST00000406438 SYCE1LA8MT33 242 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 SNX2O60749 519 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 RBL2Q08999 1139 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 SLC35F6Q8N357 371 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 TBCKQ8TEA7 893 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 TCP11Q8WWU5 503 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 PALD1Q9ULE6 856 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 ZBBXA8MT70 800 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 PSMA2P25787 234 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 KIF17Q9P2E2 1029 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 CDV3Q9UKY7 258 aaKnown RBP12.94□□□□□ -0.34
SMCR8-201ENST00000406438 ABCC2Q92887 1545 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 EIF3BP55884 814 aaKnown RBP12.94□□□□□ -0.34
SMCR8-201ENST00000406438 C2orf54Q08AI8 447 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 DDX17Q92841 729 aaKnown RBP12.94□□□□□ -0.34
SMCR8-201ENST00000406438 VPS39Q96JC1 886 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 DHX36Q9H2U1 1008 aaKnown RBP12.94□□□□□ -0.34
SMCR8-201ENST00000406438 C6orf118Q5T5N4 469 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 ZBED2Q9BTP6 218 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 KLC2Q9H0B6 622 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 POLR3EQ9NVU0 708 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 SUN2Q9UH99 717 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 PHKG2P15735 406 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 SMARCA1P28370 1054 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 HINFPQ9BQA5 517 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 ZFYVE16Q7Z3T8 1539 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 RAP1GDS1P52306 607 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 OSTNP61366 133 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 UBXN2AP68543 259 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 IMPG1Q17R60 797 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 NR1H4Q96RI1 486 aaPredicted RBP12.94□□□□□ -0.34
SMCR8-201ENST00000406438 ZMYND12Q9H0C1 365 aa12.94□□□□□ -0.34
SMCR8-201ENST00000406438 NHEJ1Q9H9Q4 299 aaPredicted RBP12.94□□□□□ -0.34
SMCR8-201ENST00000406438 CC2D2BQ6DHV5 1058 aa12.93□□□□□ -0.34
SMCR8-201ENST00000406438 PDIK1LQ8N165 341 aa12.93□□□□□ -0.34
SMCR8-201ENST00000406438 KLHL29Q96CT2 875 aa12.93□□□□□ -0.34
SMCR8-201ENST00000406438 CALR3Q96L12 384 aaKnown RBP12.93□□□□□ -0.34
SMCR8-201ENST00000406438 SKIP12755 728 aa12.93□□□□□ -0.34
SMCR8-201ENST00000406438 CD58P19256 250 aa12.93□□□□□ -0.34
SMCR8-201ENST00000406438 CDC37Q16543 378 aaPredicted RBP12.93□□□□□ -0.34
SMCR8-201ENST00000406438 CDO1Q16878 200 aa12.93□□□□□ -0.34
SMCR8-201ENST00000406438 MTERF2Q49AM1 385 aa12.93□□□□□ -0.34
SMCR8-201ENST00000406438 ALS2CLQ60I27 953 aa12.93□□□□□ -0.34
SMCR8-201ENST00000406438 DSTYKQ6XUX3 929 aa12.93□□□□□ -0.34
SMCR8-201ENST00000406438 POLIQ9UNA4 740 aa12.93□□□□□ -0.34
SMCR8-201ENST00000406438 LOC102724428A0A0B4J2F2 783 aa12.93□□□□□ -0.34
SMCR8-201ENST00000406438 SIK1P57059 783 aa12.93□□□□□ -0.34
SMCR8-201ENST00000406438 DR1Q01658 176 aa12.93□□□□□ -0.34
SMCR8-201ENST00000406438 CUL1Q13616 776 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms