RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 MAPK6Q16659 721 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 ABCB4P21439 1286 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 IRX5P78411 483 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 CXCL9Q07325 125 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 LONRF2Q1L5Z9 754 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 CCDC127Q96BQ5 260 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 FAM184BQ9ULE4 1060 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 MEGF6O75095 1541 aa12.78□□□□□ -0.36
RAPGEF3-204ENST00000405493 PSMC2P35998 433 aaKnown RBP12.77□□□□□ -0.36
RAPGEF3-204ENST00000405493 MFAP3P55082 362 aa12.77□□□□□ -0.36
RAPGEF3-204ENST00000405493 PSMD2Q13200 908 aa12.77□□□□□ -0.36
RAPGEF3-204ENST00000405493 INTS8Q75QN2 995 aaKnown RBP12.77□□□□□ -0.36
RAPGEF3-204ENST00000405493 ATG9AQ7Z3C6 839 aa12.77□□□□□ -0.36
RAPGEF3-204ENST00000405493 ODF2LQ9ULJ1 636 aa12.77□□□□□ -0.36
RAPGEF3-204ENST00000405493 PDE6CP51160 858 aa12.77□□□□□ -0.36
RAPGEF3-204ENST00000405493 TRIM50Q86XT4 487 aa12.77□□□□□ -0.36
RAPGEF3-204ENST00000405493 SIRT2Q8IXJ6 389 aa12.77□□□□□ -0.36
RAPGEF3-204ENST00000405493 NSUN7Q8NE18 718 aaKnown RBP12.77□□□□□ -0.36
RAPGEF3-204ENST00000405493 GLT1D1Q96MS3 346 aa12.77□□□□□ -0.36
RAPGEF3-204ENST00000405493 MED4Q9NPJ6 270 aa12.77□□□□□ -0.36
RAPGEF3-204ENST00000405493 MAP2K2P36507 400 aa12.77□□□□□ -0.37
RAPGEF3-204ENST00000405493 PTK2Q05397 1052 aa12.77□□□□□ -0.37
RAPGEF3-204ENST00000405493 QRICH1Q2TAL8 776 aa12.77□□□□□ -0.37
RAPGEF3-204ENST00000405493 RASGRP4Q8TDF6 673 aa12.77□□□□□ -0.37
RAPGEF3-204ENST00000405493 BUB1O43683 1085 aa12.77□□□□□ -0.37
RAPGEF3-204ENST00000405493 C6orf222P0C671 652 aaPredicted RBP12.77□□□□□ -0.37
RAPGEF3-204ENST00000405493 SRGAP2CP0DJJ0 459 aa12.77□□□□□ -0.37
RAPGEF3-204ENST00000405493 NFKBIAP25963 317 aa12.77□□□□□ -0.37
RAPGEF3-204ENST00000405493 C1orf228Q6PIY5 440 aa12.77□□□□□ -0.37
RAPGEF3-204ENST00000405493 MED7O43513 233 aa12.77□□□□□ -0.37
RAPGEF3-204ENST00000405493 PAK2Q13177 524 aa12.77□□□□□ -0.37
RAPGEF3-204ENST00000405493 PFKFB3Q16875 520 aaPredicted RBP12.77□□□□□ -0.37
RAPGEF3-204ENST00000405493 OR8K1Q8NGG5 319 aa12.77□□□□□ -0.37
RAPGEF3-204ENST00000405493 FAM71BQ8TC56 605 aa12.77□□□□□ -0.37
RAPGEF3-204ENST00000405493 POLR3EQ9NVU0 708 aa12.77□□□□□ -0.37
RAPGEF3-204ENST00000405493 STAM2O75886 525 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 TERF2Q15554 542 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 PTPROQ16827 1216 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 HAUS1Q96CS2 278 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 STK36Q9NRP7 1315 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 GSG1L2A8MUP6 293 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 DPYSL4O14531 572 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 XPAP23025 273 aaPredicted RBP12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 RASSF7Q02833 373 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 ITIH3Q06033 890 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 ZDHHC15Q96MV8 337 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 AMFRQ9UKV5 643 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 PFDN6O15212 129 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 P4HBP07237 508 aaKnown RBP12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 SRGAP2BP0DMP2 458 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 CPT1AP50416 773 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 POLR2FP61218 127 aaKnown RBP12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 SLC44A5Q8NCS7 719 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 PGBD1Q96JS3 809 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 MROH8Q9H579 483 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 SAR1BQ9Y6B6 198 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 PPP4CP60510 307 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 SPATA1Q5VX52 437 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 PLEKHH3Q7Z736 793 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 FAM83AQ86UY5 434 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 PGBD4Q96DM1 585 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 MTMR4Q9NYA4 1195 aa12.76□□□□□ -0.37
RAPGEF3-204ENST00000405493 CXCL11O14625 94 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 GOLGA8FQ08AF8 430 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 GOLGA8DPQ0D2H9 430 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 PPP2R5DQ14738 602 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 SLC39A14Q15043 492 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 FYB2Q5VWT5 728 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 SCFD2Q8WU76 684 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 CABS1Q96KC9 395 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 PDE11AQ9HCR9 933 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 A0A1W2PQ27 194 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 A0A1W2PQ64 194 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 A0A1W2PQD8 194 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 DDNO94850 711 aaPredicted RBP12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 CIITAP33076 1130 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 USP11P51784 963 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 ARPP19P56211 112 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 PSMC5P62195 406 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 IFRD2Q12894 506 aaPredicted RBP12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 GSDMAQ96QA5 445 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 ADGRB1O14514 1584 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 SPDYE2BA6NHP3 402 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 SPDYE6P0CI01 402 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 SNAP25P60880 206 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 ARHGAP4P98171 946 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 TFAMQ00059 246 aaKnown RBP12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 IER5Q5VY09 327 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 TRIM11Q96F44 468 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 TMEM39BQ9GZU3 492 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 SMARCAD1Q9H4L7 1026 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 PIDD1Q9HB75 910 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 DDX41Q9UJV9 622 aaKnown RBP12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 DCDC2CA8MYV0 355 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 MAFGO15525 162 aa12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 SEC31AO94979 1220 aaKnown RBP12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 CLNS1AP54105 237 aaKnown RBP12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 FKBP1AP62942 108 aaKnown RBP12.75□□□□□ -0.37
RAPGEF3-204ENST00000405493 RUFY4Q6ZNE9 571 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms