RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 KLRC4O43908 158 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 ARIH2O95376 493 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 EYA4O95677 639 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 GGPS1O95749 300 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 TXNP10599 105 aaKnown RBP4.13□□□□□ -1.75
RTN4-208ENST00000404909 CYP11B2P19099 503 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 SFNP31947 248 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 APLP1P51693 650 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 ACTR2P61160 394 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 STK4Q13043 487 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 GRB14Q14449 540 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 UGCGQ16739 394 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 ZNF792Q3KQV3 632 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 HERC4Q5GLZ8 1057 aaPredicted RBP4.13□□□□□ -1.75
RTN4-208ENST00000404909 TMEM63BQ5T3F8 832 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 ZNF658Q5TYW1 1059 aaPredicted RBP4.13□□□□□ -1.75
RTN4-208ENST00000404909 ZNF746Q6NUN9 644 aaPredicted RBP4.13□□□□□ -1.75
RTN4-208ENST00000404909 C17orf99Q6UX52 265 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 CREBRFQ8IUR6 639 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 RUSC1Q9BVN2 902 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 PANK4Q9NVE7 773 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 CTNND2Q9UQB3 1225 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 DOCK3Q8IZD9 2030 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 RBBP6Q7Z6E9 1792 aaKnown RBP4.13□□□□□ -1.75
RTN4-208ENST00000404909 SMTNL1A8MU46 457 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 NOP56O00567 594 aaKnown RBP4.13□□□□□ -1.75
RTN4-208ENST00000404909 TNPO2O14787 897 aaKnown RBP4.13□□□□□ -1.75
RTN4-208ENST00000404909 PSAPP07602 524 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 CYP2B6P20813 491 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 YWHABP31946 246 aaKnown RBP4.13□□□□□ -1.75
RTN4-208ENST00000404909 ICAM3P32942 547 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 PRCPP42785 496 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 TM4SF4P48230 202 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 PSMC5P62195 406 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 TPM4P67936 248 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 MYL5Q02045 173 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 NEDD9Q14511 834 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 LRRC41Q15345 812 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 TPD52L1Q16890 204 aaPredicted RBP4.13□□□□□ -1.75
RTN4-208ENST00000404909 UVSSAQ2YD98 709 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 ARSHQ5FYA8 562 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 GJC2Q5T442 439 aaPredicted RBP4.13□□□□□ -1.75
RTN4-208ENST00000404909 PLA2G4FQ68DD2 849 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 MIS18BP1Q6P0N0 1132 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 CNNM4Q6P4Q7 775 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 UNC13DQ70J99 1090 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.13□□□□□ -1.753e-7■□□□□ 8.1
RTN4-208ENST00000404909 SMAP1Q8IYB5 467 aaPredicted RBP4.13□□□□□ -1.75
RTN4-208ENST00000404909 ABRAQ8N0Z2 381 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 SYT2Q8N9I0 419 aaPredicted RBP4.13□□□□□ -1.75
RTN4-208ENST00000404909 COPS5Q92905 334 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 EEF2KMTQ96G04 330 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 HHIPL1Q96JK4 782 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 REEP2Q9BRK0 252 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 TRIM5Q9C035 493 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 ZCCHC17Q9NP64 241 aaKnown RBP4.13□□□□□ -1.75
RTN4-208ENST00000404909 CREBZFQ9NS37 354 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 SLC5A4Q9NY91 659 aa4.13□□□□□ -1.75
RTN4-208ENST00000404909 ZHX1Q9UKY1 873 aaPredicted RBP4.13□□□□□ -1.75
RTN4-208ENST00000404909 SLC15A5A6NIM6 579 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 PPP1R3GB7ZBB8 358 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 SLC26A4O43511 780 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 CA12O43570 354 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 USO1O60763 962 aaKnown RBP4.12□□□□□ -1.75
RTN4-208ENST00000404909 TBCAO75347 108 aaKnown RBP4.12□□□□□ -1.75
RTN4-208ENST00000404909 FARP2O94887 1054 aaPredicted RBP4.12□□□□□ -1.75
RTN4-208ENST00000404909 RHOBTB3O94955 611 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 ADCY5O95622 1261 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 TBC1D8O95759 1140 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 TGFB3P10600 412 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 NPEPPSP55786 919 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 STIM1Q13586 685 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 TTLL4Q14679 1199 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 KCNB1Q14721 858 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 XKR9Q5GH70 373 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 RINT1Q6NUQ1 792 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 CCDC60Q8IWA6 550 aaPredicted RBP4.12□□□□□ -1.75
RTN4-208ENST00000404909 CCDC65Q8IXS2 484 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 DHX37Q8IY37 1157 aaKnown RBP4.12□□□□□ -1.75
RTN4-208ENST00000404909 NPLOC4Q8TAT6 608 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 NEK9Q8TD19 979 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 NELFBQ8WX92 580 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 DNAJC19Q96DA6 116 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 MAML3Q96JK9 1138 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 SPATA33Q96N06 139 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 SENP7Q9BQF6 1050 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 FANCLQ9NW38 375 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.12□□□□□ -1.75
RTN4-208ENST00000404909 DDX41Q9UJV9 622 aaKnown RBP4.12□□□□□ -1.75
RTN4-208ENST00000404909 NFE2L3Q9Y4A8 694 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 HTTP42858 3142 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 MCM3APO60318 1980 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 NFASCO94856 1347 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 ADGRA2Q96PE1 1338 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 KIAA1217Q5T5P2 1943 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 PVALEFA0A1B0GWK0 134 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 RSPH10B2B2RC85 870 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 AP5Z1O43299 807 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 TRPA1O75762 1119 aa4.12□□□□□ -1.75
RTN4-208ENST00000404909 RSPH10BP0C881 870 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms