RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 ZNF658Q5TYW1 1059 aaPredicted RBP23.44■■□□□ 1.34
TPM1-208ENST00000404484 TRIB2Q92519 343 aa23.44■■□□□ 1.34
TPM1-208ENST00000404484 TMEM106CQ9BVX2 250 aa23.44■■□□□ 1.34
TPM1-208ENST00000404484 UNC45AQ9H3U1 944 aa23.44■■□□□ 1.34
TPM1-208ENST00000404484 ERCC5P28715 1186 aaPredicted RBP23.44■■□□□ 1.34
TPM1-208ENST00000404484 ADORA2AP29274 412 aa23.44■■□□□ 1.34
TPM1-208ENST00000404484 MYL5Q02045 173 aa23.44■■□□□ 1.34
TPM1-208ENST00000404484 TRIM32Q13049 653 aa23.44■■□□□ 1.34
TPM1-208ENST00000404484 KCTD2Q14681 263 aa23.44■■□□□ 1.34
TPM1-208ENST00000404484 CCL14Q16627 93 aa23.44■■□□□ 1.34
TPM1-208ENST00000404484 PVALEFA0A1B0GWK0 134 aa23.43■■□□□ 1.34
TPM1-208ENST00000404484 EML1O00423 815 aa23.43■■□□□ 1.34
TPM1-208ENST00000404484 CHMP2AO43633 222 aa23.43■■□□□ 1.34
TPM1-208ENST00000404484 RHOBTB3O94955 611 aa23.43■■□□□ 1.34
TPM1-208ENST00000404484 PLA2G4BP0C869 781 aa23.43■■□□□ 1.34
TPM1-208ENST00000404484 SPATA31C1P0DKV0 1188 aa23.43■■□□□ 1.34
TPM1-208ENST00000404484 CCL5P13501 91 aa23.43■■□□□ 1.34
TPM1-208ENST00000404484 ALDH5A1P51649 535 aaPredicted RBP23.43■■□□□ 1.34
TPM1-208ENST00000404484 DHX8Q14562 1220 aaKnown RBP23.43■■□□□ 1.34
TPM1-208ENST00000404484 FAM133AQ8N9E0 248 aa23.43■■□□□ 1.34
TPM1-208ENST00000404484 PPP1R9BQ96SB3 815 aa23.43■■□□□ 1.34
TPM1-208ENST00000404484 MMP19Q99542 508 aa23.43■■□□□ 1.34
TPM1-208ENST00000404484 APBA2Q99767 749 aa23.43■■□□□ 1.34
TPM1-208ENST00000404484 HSD17B14Q9BPX1 270 aa23.43■■□□□ 1.34
TPM1-208ENST00000404484 UNC93B1Q9H1C4 597 aa23.43■■□□□ 1.34
TPM1-208ENST00000404484 EXOC1Q9NV70 894 aa23.43■■□□□ 1.34
TPM1-208ENST00000404484 LCTP09848 1927 aa23.43■■□□□ 1.34
TPM1-208ENST00000404484 LOC102724159A0A0B4J2E5 919 aa23.42■■□□□ 1.34
TPM1-208ENST00000404484 COBLO75128 1261 aa23.42■■□□□ 1.34
TPM1-208ENST00000404484 EIF3JO75822 258 aaKnown RBP23.42■■□□□ 1.34
TPM1-208ENST00000404484 HMGCRP04035 888 aa23.42■■□□□ 1.34
TPM1-208ENST00000404484 HOXC6P09630 235 aa23.42■■□□□ 1.34
TPM1-208ENST00000404484 FCER1AP12319 257 aa23.42■■□□□ 1.34
TPM1-208ENST00000404484 PPP1R2P41236 205 aa23.42■■□□□ 1.34
TPM1-208ENST00000404484 KRT76Q01546 638 aa23.42■■□□□ 1.34
TPM1-208ENST00000404484 PWP2Q15269 919 aaKnown RBP23.42■■□□□ 1.34
TPM1-208ENST00000404484 POTEGQ6S5H5 508 aa23.42■■□□□ 1.34
TPM1-208ENST00000404484 MIER3Q7Z3K6 550 aa23.42■■□□□ 1.34
TPM1-208ENST00000404484 KCNK18Q7Z418 384 aa23.42■■□□□ 1.34
TPM1-208ENST00000404484 ABRAQ8N0Z2 381 aa23.42■■□□□ 1.34
TPM1-208ENST00000404484 NPLOC4Q8TAT6 608 aa23.42■■□□□ 1.34
TPM1-208ENST00000404484 RNF208Q9H0X6 261 aa23.42■■□□□ 1.34
TPM1-208ENST00000404484 DHX15O43143 795 aaKnown RBP23.41■■□□□ 1.34
TPM1-208ENST00000404484 KLRC4O43908 158 aa23.41■■□□□ 1.34
TPM1-208ENST00000404484 EN2P19622 333 aaPredicted RBP23.41■■□□□ 1.34
TPM1-208ENST00000404484 SFNP31947 248 aa23.41■■□□□ 1.34
TPM1-208ENST00000404484 JAK3P52333 1124 aa23.41■■□□□ 1.34
TPM1-208ENST00000404484 PLCB2Q00722 1185 aa23.41■■□□□ 1.34
TPM1-208ENST00000404484 ITGB3BPQ13352 177 aaPredicted RBP23.41■■□□□ 1.34
TPM1-208ENST00000404484 STIM1Q13586 685 aa23.41■■□□□ 1.34
TPM1-208ENST00000404484 KMT5BQ4FZB7 885 aa23.41■■□□□ 1.34
TPM1-208ENST00000404484 DPP9Q86TI2 863 aa23.41■■□□□ 1.34
TPM1-208ENST00000404484 RDM1Q8NG50 284 aa23.41■■□□□ 1.34
TPM1-208ENST00000404484 FLRT1Q9NZU1 646 aa23.41■■□□□ 1.34
TPM1-208ENST00000404484 MYMKA6NI61 221 aa23.4■■□□□ 1.34
TPM1-208ENST00000404484 CNTN2Q02246 1040 aa23.4■■□□□ 1.34
TPM1-208ENST00000404484 CYP4A11Q02928 519 aa23.4■■□□□ 1.34
TPM1-208ENST00000404484 UNC13DQ70J99 1090 aa23.4■■□□□ 1.34
TPM1-208ENST00000404484 ENOX1Q8TC92 643 aaKnown RBP23.4■■□□□ 1.34
TPM1-208ENST00000404484 PDLIM2Q96JY6 352 aa23.4■■□□□ 1.34
TPM1-208ENST00000404484 PKD2L1Q9P0L9 805 aa23.4■■□□□ 1.34
TPM1-208ENST00000404484 NFASCO94856 1347 aa23.4■■□□□ 1.34
TPM1-208ENST00000404484 E9PMD0 336 aa23.4■■□□□ 1.34
TPM1-208ENST00000404484 EYA4O95677 639 aa23.4■■□□□ 1.34
TPM1-208ENST00000404484 SSBP05455 408 aaKnown RBP eCLIP23.4■■□□□ 1.34
TPM1-208ENST00000404484 EDNRBP24530 442 aa23.4■■□□□ 1.34
TPM1-208ENST00000404484 PDE4DQ08499 809 aa23.4■■□□□ 1.34
TPM1-208ENST00000404484 SARM1Q6SZW1 724 aa23.4■■□□□ 1.34
TPM1-208ENST00000404484 TRMT44Q8IYL2 757 aaKnown RBP23.4■■□□□ 1.34
TPM1-208ENST00000404484 DYDC2Q96IM9 177 aa23.4■■□□□ 1.34
TPM1-208ENST00000404484 WDR64B1ANS9 1081 aa23.39■■□□□ 1.33
TPM1-208ENST00000404484 DDX39AO00148 427 aaKnown RBP23.39■■□□□ 1.33
TPM1-208ENST00000404484 SLITRK3O94933 977 aa23.39■■□□□ 1.33
TPM1-208ENST00000404484 ICAM3P32942 547 aa23.39■■□□□ 1.33
TPM1-208ENST00000404484 ZNF746Q6NUN9 644 aaPredicted RBP23.39■■□□□ 1.33
TPM1-208ENST00000404484 TPH2Q8IWU9 490 aa23.39■■□□□ 1.33
TPM1-208ENST00000404484 SYT2Q8N9I0 419 aaPredicted RBP23.39■■□□□ 1.33
TPM1-208ENST00000404484 DDX12PQ92771 950 aa23.39■■□□□ 1.33
TPM1-208ENST00000404484 NACC1Q96RE7 527 aa23.39■■□□□ 1.33
TPM1-208ENST00000404484 RGL1Q9NZL6 768 aa23.39■■□□□ 1.33
TPM1-208ENST00000404484 DNAJC25-GNG10A0A024R161 153 aa23.38■■□□□ 1.33
TPM1-208ENST00000404484 SOWAHBA6NEL2 793 aa23.38■■□□□ 1.33
TPM1-208ENST00000404484 SPATA31C2B4DYI2 1134 aa23.38■■□□□ 1.33
TPM1-208ENST00000404484 ADCY5O95622 1261 aa23.38■■□□□ 1.33
TPM1-208ENST00000404484 P4HBP07237 508 aaKnown RBP23.38■■□□□ 1.33
TPM1-208ENST00000404484 SLC12A3P55017 1021 aa23.38■■□□□ 1.33
TPM1-208ENST00000404484 NCAPHQ15003 741 aa23.38■■□□□ 1.33
TPM1-208ENST00000404484 MAP3K21Q5TCX8 1036 aa23.38■■□□□ 1.33
TPM1-208ENST00000404484 GPBP1Q86WP2 473 aa23.38■■□□□ 1.33
TPM1-208ENST00000404484 GIMAP8Q8ND71 665 aaPredicted RBP23.38■■□□□ 1.33
TPM1-208ENST00000404484 SENP7Q9BQF6 1050 aa23.38■■□□□ 1.33
TPM1-208ENST00000404484 PPP1R3GB7ZBB8 358 aa23.37■■□□□ 1.33
TPM1-208ENST00000404484 IGHA2P01877 340 aa23.37■■□□□ 1.33
TPM1-208ENST00000404484 PGK2P07205 417 aa23.37■■□□□ 1.33
TPM1-208ENST00000404484 GJB1P08034 283 aa23.37■■□□□ 1.33
TPM1-208ENST00000404484 CACNB2Q08289 660 aaPredicted RBP23.37■■□□□ 1.33
TPM1-208ENST00000404484 PSMD2Q13200 908 aa23.37■■□□□ 1.33
TPM1-208ENST00000404484 CTTNQ14247 550 aaKnown RBP23.37■■□□□ 1.33
TPM1-208ENST00000404484 CCDC65Q8IXS2 484 aa23.37■■□□□ 1.33
TPM1-208ENST00000404484 SMAP1Q8IYB5 467 aaPredicted RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms