RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 SNCAIPQ9Y6H5 919 aa13.59□□□□□ -0.23
CLIP4-203ENST00000401617 CHMP2AO43633 222 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 GAP43P17677 238 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 HOXD13P35453 343 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 ETF1P62495 437 aaKnown RBP13.58□□□□□ -0.24
CLIP4-203ENST00000401617 MAP3K9P80192 1104 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 ITGB3BPQ13352 177 aaPredicted RBP13.58□□□□□ -0.24
CLIP4-203ENST00000401617 MTF1Q14872 753 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 SFR1Q86XK3 245 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 KIF18AQ8NI77 898 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 RBM46Q8TBY0 533 aaKnown RBP13.58□□□□□ -0.24
CLIP4-203ENST00000401617 PIGOQ8TEQ8 1089 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 NDST4Q9H3R1 872 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 KCND2Q9NZV8 630 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 RNF181Q9P0P0 153 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 TRAF3IP3Q9Y228 551 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 SIK3Q9Y2K2 1263 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 COL4A3BPQ9Y5P4 624 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 ADGRG1Q9Y653 693 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 LCTP09848 1927 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 A0A1W2PQJ5 194 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 RSPH10B2B2RC85 870 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 CTIFO43310 598 aaKnown RBP13.58□□□□□ -0.24
CLIP4-203ENST00000401617 GNA14O95837 355 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 RSPH10BP0C881 870 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 CASP5P51878 434 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 ERVK-24P63145 666 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 TMEM132BQ14DG7 1078 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 SYCP1Q15431 976 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 OR8K1Q8NGG5 319 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 RMDN3Q96TC7 470 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 SYT17Q9BSW7 474 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 TBC1D22BQ9NU19 505 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 HOXC10Q9NYD6 342 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 TMOD4Q9NZQ9 345 aa13.58□□□□□ -0.24
CLIP4-203ENST00000401617 LUC7L2Q9Y383 392 aaKnown RBP13.58□□□□□ -0.24
CLIP4-203ENST00000401617 TRAF5O00463 557 aa13.57□□□□□ -0.24
CLIP4-203ENST00000401617 ZBTB39O15060 712 aa13.57□□□□□ -0.24
CLIP4-203ENST00000401617 EIF2AK2P19525 551 aaKnown RBP13.57□□□□□ -0.24
CLIP4-203ENST00000401617 ZNF131P52739 623 aa13.57□□□□□ -0.24
CLIP4-203ENST00000401617 BAATQ14032 418 aaPredicted RBP13.57□□□□□ -0.24
CLIP4-203ENST00000401617 FKBP15Q5T1M5 1219 aa13.57□□□□□ -0.24
CLIP4-203ENST00000401617 CYP26C1Q6V0L0 522 aa13.57□□□□□ -0.24
CLIP4-203ENST00000401617 A0A0G2JMZ2 1700 aa13.57□□□□□ -0.24
CLIP4-203ENST00000401617 SPDYE16A6NNV3 312 aaPredicted RBP13.56□□□□□ -0.24
CLIP4-203ENST00000401617 PES1O00541 588 aaKnown RBP13.56□□□□□ -0.24
CLIP4-203ENST00000401617 LYPLA2O95372 231 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 P4HBP07237 508 aaKnown RBP13.56□□□□□ -0.24
CLIP4-203ENST00000401617 CCDC175P0C221 793 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 YBX3P16989 372 aaKnown RBP eCLIP13.56□□□□□ -0.24
CLIP4-203ENST00000401617 MTMR1Q13613 665 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 VGLL4Q14135 290 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 MEA1Q16626 185 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 KNOP1Q1ED39 458 aaKnown RBP13.56□□□□□ -0.24
CLIP4-203ENST00000401617 SNRNP48Q6IEG0 339 aaKnown RBP13.56□□□□□ -0.24
CLIP4-203ENST00000401617 VSIG10LQ86VR7 867 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 LXNQ9BS40 222 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 TEX13BQ9BXU2 312 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 PHLPP2Q6ZVD8 1323 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 PDXKO00764 312 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 EIF3DO15371 548 aaKnown RBP eCLIP13.56□□□□□ -0.24
CLIP4-203ENST00000401617 GUCY2CP25092 1073 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 ZBED6P86452 979 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 WDR59Q6PJI9 974 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 NSMFQ6X4W1 530 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 SYT10Q6XYQ8 523 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 MIER3Q7Z3K6 550 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 TRIM59Q8IWR1 403 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 NELFCDQ8IXH7 590 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 ZNF592Q92610 1267 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 DCPSQ96C86 337 aaKnown RBP13.56□□□□□ -0.24
CLIP4-203ENST00000401617 FIZ1Q96SL8 496 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 DESI2Q9BSY9 194 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 ZHX3Q9H4I2 956 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 SEL1LQ9UBV2 794 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 ODF2LQ9ULJ1 636 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 UTRNP46939 3433 aa13.56□□□□□ -0.24
CLIP4-203ENST00000401617 TBCAO75347 108 aaKnown RBP13.55□□□□□ -0.24
CLIP4-203ENST00000401617 MYBP10242 640 aa13.55□□□□□ -0.24
CLIP4-203ENST00000401617 KLK7P49862 253 aa13.55□□□□□ -0.24
CLIP4-203ENST00000401617 ARHGEF16Q5VV41 709 aa13.55□□□□□ -0.24
CLIP4-203ENST00000401617 L3MBTL3Q96JM7 780 aaPredicted RBP13.55□□□□□ -0.24
CLIP4-203ENST00000401617 PURBQ96QR8 312 aaKnown RBP13.55□□□□□ -0.24
CLIP4-203ENST00000401617 ZSWIM4Q9H7M6 989 aa13.55□□□□□ -0.24
CLIP4-203ENST00000401617 MRPL44Q9H9J2 332 aaKnown RBP13.55□□□□□ -0.24
CLIP4-203ENST00000401617 L2HGDHQ9H9P8 463 aa13.55□□□□□ -0.24
CLIP4-203ENST00000401617 DBR1Q9UK59 544 aaKnown RBP13.55□□□□□ -0.24
CLIP4-203ENST00000401617 ADM5C9JUS6 153 aa13.55□□□□□ -0.24
CLIP4-203ENST00000401617 MAFGO15525 162 aa13.55□□□□□ -0.24
CLIP4-203ENST00000401617 HNRNPH3P31942 346 aaKnown RBP13.55□□□□□ -0.24
CLIP4-203ENST00000401617 CDK17Q00537 523 aa13.55□□□□□ -0.24
CLIP4-203ENST00000401617 C9orf131Q5VYM1 1079 aa13.55□□□□□ -0.24
CLIP4-203ENST00000401617 DLK2Q6UY11 383 aa13.55□□□□□ -0.24
CLIP4-203ENST00000401617 SULF1Q8IWU6 871 aa13.55□□□□□ -0.24
CLIP4-203ENST00000401617 BANK1Q8NDB2 785 aa13.55□□□□□ -0.24
CLIP4-203ENST00000401617 GPRASP2Q96D09 838 aa13.55□□□□□ -0.24
CLIP4-203ENST00000401617 BCAS3Q9H6U6 928 aa13.55□□□□□ -0.24
CLIP4-203ENST00000401617 PARVGQ9HBI0 331 aa13.55□□□□□ -0.24
CLIP4-203ENST00000401617 AGPAT5Q9NUQ2 364 aa13.55□□□□□ -0.24
CLIP4-203ENST00000401617 TYW1Q9NV66 732 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms