RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 MED14O60244 1454 aa19.68■□□□□ 0.74
COL18A1-204ENST00000400337 ADRA2BP18089 450 aa19.68■□□□□ 0.74
COL18A1-204ENST00000400337 TRIM28Q13263 835 aaKnown RBP19.68■□□□□ 0.74
COL18A1-204ENST00000400337 PBKQ96KB5 322 aa19.68■□□□□ 0.74
COL18A1-204ENST00000400337 AFF2P51816 1311 aa19.68■□□□□ 0.74
COL18A1-204ENST00000400337 E9PMD0 336 aa19.68■□□□□ 0.74
COL18A1-204ENST00000400337 RPS6KA2Q15349 733 aa19.68■□□□□ 0.74
COL18A1-204ENST00000400337 GPSM2P81274 684 aa19.68■□□□□ 0.74
COL18A1-204ENST00000400337 NXNQ6DKJ4 435 aa19.68■□□□□ 0.74
COL18A1-204ENST00000400337 RSRC2Q7L4I2 434 aaKnown RBP19.68■□□□□ 0.74
COL18A1-204ENST00000400337 PARD6BQ9BYG5 372 aa19.68■□□□□ 0.74
COL18A1-204ENST00000400337 CDKL2Q92772 493 aa19.68■□□□□ 0.74
COL18A1-204ENST00000400337 NLRP4Q96MN2 994 aa19.68■□□□□ 0.74
COL18A1-204ENST00000400337 MSTO1Q9BUK6 570 aa19.68■□□□□ 0.74
COL18A1-204ENST00000400337 INHBAP08476 426 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 MTMR1Q13613 665 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 CYP4F22Q6NT55 531 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 SFR1Q86XK3 245 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.67■□□□□ 0.74
COL18A1-204ENST00000400337 NBPF3Q9H094 633 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 PIM2Q9P1W9 311 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 CLNS1AP54105 237 aaKnown RBP19.67■□□□□ 0.74
COL18A1-204ENST00000400337 RABL6Q3YEC7 729 aaPredicted RBP19.67■□□□□ 0.74
COL18A1-204ENST00000400337 SCARA5Q6ZMJ2 495 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 RMDN3Q96TC7 470 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 PRCPP42785 496 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 ABI1Q8IZP0 508 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 LRRC8CQ8TDW0 803 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 INTS9Q9NV88 658 aaKnown RBP19.67■□□□□ 0.74
COL18A1-204ENST00000400337 MADDQ8WXG6 1647 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 OVOS2A0A0G2JMS6 1433 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 OVOS2A0A0J9YW53 1432 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 OVOS2Q6IE36 1432 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 CDC42BPBQ9Y5S2 1711 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 SPDYE16A6NNV3 312 aaPredicted RBP19.67■□□□□ 0.74
COL18A1-204ENST00000400337 ADCY1Q08828 1119 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 SPDYE2Q495Y8 402 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 RCSD1Q6JBY9 416 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 RAVER2Q9HCJ3 691 aaKnown RBP19.67■□□□□ 0.74
COL18A1-204ENST00000400337 POLD4Q9HCU8 107 aa19.67■□□□□ 0.74
COL18A1-204ENST00000400337 ZNF233A6NK53 670 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 PRR29P0C7W0 189 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 TXNRD1Q16881 649 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 STOX1Q6ZVD7 989 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 BANK1Q8NDB2 785 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 CALN1Q9BXU9 219 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 ZDHHC9Q9Y397 364 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 MED7O43513 233 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 ARHGAP42A6NI28 874 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 TXNDC9O14530 226 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 ATP8B1O43520 1251 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 DHX9Q08211 1270 aaKnown RBP19.66■□□□□ 0.74
COL18A1-204ENST00000400337 PPP1R2P3Q6NXS1 205 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 RAD54LQ92698 747 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 QRICH2Q9H0J4 1663 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 EIF3CLB5ME19 914 aaKnown RBP19.66■□□□□ 0.74
COL18A1-204ENST00000400337 ARHGAP4P98171 946 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 CCNYQ8ND76 341 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 EIF3CQ99613 913 aaKnown RBP19.66■□□□□ 0.74
COL18A1-204ENST00000400337 IFT122Q9HBG6 1241 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 BARHL2Q9NY43 387 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 PDE1BQ01064 536 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 OR6B2Q6IFH4 312 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 SGMS1Q86VZ5 419 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 RNF10Q8N5U6 811 aaKnown RBP19.66■□□□□ 0.74
COL18A1-204ENST00000400337 AP1M1Q9BXS5 423 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 ANAPC5Q9UJX4 755 aa19.66■□□□□ 0.74
COL18A1-204ENST00000400337 NKX1-1Q15270 411 aaPredicted RBP19.65■□□□□ 0.74
COL18A1-204ENST00000400337 EFCC1Q9HA90 598 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 SLC38A10Q9HBR0 1119 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 ADGRB3O60242 1522 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 LGALS16A8MUM7 142 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 MCF2LO15068 1137 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 PRELPP51888 382 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 JAK3P52333 1124 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 TOGARAM2Q6ZUX3 1019 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 RPUSD2Q8IZ73 545 aaKnown RBP19.65■□□□□ 0.74
COL18A1-204ENST00000400337 PLEKHG2Q9H7P9 1386 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 MYO3BQ8WXR4 1341 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 POTEB3A0JP26 581 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 POTECB2RU33 542 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 POTEBQ6S5H4 581 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 NUF2Q9BZD4 464 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 CCDC68Q9H2F9 335 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 ZHX2Q9Y6X8 837 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 ABCA6Q8N139 1617 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 LRRD1A4D1F6 860 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 CCDC151A5D8V7 595 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 KIF28PB7ZC32 967 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 SLC7A5Q01650 507 aa19.65■□□□□ 0.74
COL18A1-204ENST00000400337 TRIP13Q15645 432 aaPredicted RBP19.65■□□□□ 0.74
COL18A1-204ENST00000400337 TACO1Q9BSH4 297 aaKnown RBP19.65■□□□□ 0.74
COL18A1-204ENST00000400337 ALDH8A1Q9H2A2 487 aaPredicted RBP19.65■□□□□ 0.74
COL18A1-204ENST00000400337 RPF1Q9H9Y2 349 aaKnown RBP19.65■□□□□ 0.74
COL18A1-204ENST00000400337 PP2D1A8MPX8 630 aa19.64■□□□□ 0.74
COL18A1-204ENST00000400337 CCT5P48643 541 aa19.64■□□□□ 0.74
COL18A1-204ENST00000400337 MYO1EQ12965 1108 aa19.64■□□□□ 0.74
COL18A1-204ENST00000400337 NFIXQ14938 502 aa19.64■□□□□ 0.74
COL18A1-204ENST00000400337 VCXQ9H320 206 aa19.64■□□□□ 0.74
COL18A1-204ENST00000400337 FAN1Q9Y2M0 1017 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms