RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ZNF483Q8TF39 744 aaPredicted RBP18.65■□□□□ 0.58
PTPRA-205ENST00000399903 CCT6BQ92526 530 aa18.65■□□□□ 0.58
PTPRA-205ENST00000399903 SAMD15Q9P1V8 674 aa18.65■□□□□ 0.58
PTPRA-205ENST00000399903 ANAPC4Q9UJX5 808 aa18.65■□□□□ 0.58
PTPRA-205ENST00000399903 TRPC6Q9Y210 931 aa18.65■□□□□ 0.58
PTPRA-205ENST00000399903 KRIT1O00522 736 aa18.65■□□□□ 0.58
PTPRA-205ENST00000399903 SNX1Q13596 522 aa18.65■□□□□ 0.58
PTPRA-205ENST00000399903 NBPF9Q3BBW0 867 aa18.65■□□□□ 0.58
PTPRA-205ENST00000399903 FAM43BQ6ZT52 329 aaPredicted RBP18.65■□□□□ 0.58
PTPRA-205ENST00000399903 BZW1Q7L1Q6 419 aaKnown RBP18.65■□□□□ 0.58
PTPRA-205ENST00000399903 COL5A3P25940 1745 aaPredicted RBP18.65■□□□□ 0.58
PTPRA-205ENST00000399903 A8MUI8 341 aa18.64■□□□□ 0.58
PTPRA-205ENST00000399903 SART1O43290 800 aaKnown RBP18.64■□□□□ 0.58
PTPRA-205ENST00000399903 KCNJ2P63252 427 aa18.64■□□□□ 0.58
PTPRA-205ENST00000399903 PICALMQ13492 652 aa18.64■□□□□ 0.58
PTPRA-205ENST00000399903 NPY5RQ15761 445 aa18.64■□□□□ 0.58
PTPRA-205ENST00000399903 CABP7Q86V35 215 aa18.64■□□□□ 0.58
PTPRA-205ENST00000399903 CD302Q8IX05 232 aa18.64■□□□□ 0.58
PTPRA-205ENST00000399903 DYDC1Q8WWB3 177 aa18.64■□□□□ 0.58
PTPRA-205ENST00000399903 TCP11L1Q9NUJ3 509 aa18.64■□□□□ 0.58
PTPRA-205ENST00000399903 FAM205AQ6ZU69 1335 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 MGRN1O60291 552 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 RHOBTB3O94955 611 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 TNFRSF8P28908 595 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 FUT2Q10981 343 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 KSR1Q8IVT5 923 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 SPICE1Q8N0Z3 855 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 USP38Q8NB14 1042 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 ERGIC2Q96RQ1 377 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 PSMD1Q99460 953 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 TBC1D7Q9P0N9 293 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 CPSF2Q9P2I0 782 aaKnown RBP18.64■□□□□ 0.57
PTPRA-205ENST00000399903 DOCK2Q92608 1830 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 CHD4Q14839 1912 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 ITGA4P13612 1032 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 CHN1P15882 459 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 EIF6P56537 245 aaKnown RBP18.64■□□□□ 0.57
PTPRA-205ENST00000399903 LETM2Q2VYF4 491 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 FAM133AQ8N9E0 248 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 VAT1LQ9HCJ6 419 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 MLXIPLQ9NP71 852 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 LUC7LQ9NQ29 371 aaKnown RBP18.64■□□□□ 0.57
PTPRA-205ENST00000399903 IL17RBQ9NRM6 502 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 TSKSQ9UJT2 592 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 ARAP2Q8WZ64 1704 aa18.64■□□□□ 0.57
PTPRA-205ENST00000399903 TTI1O43156 1089 aa18.63■□□□□ 0.57
PTPRA-205ENST00000399903 COPB2P35606 906 aa18.63■□□□□ 0.57
PTPRA-205ENST00000399903 GNPTABQ3T906 1256 aa18.63■□□□□ 0.57
PTPRA-205ENST00000399903 SFMBT2Q5VUG0 894 aa18.63■□□□□ 0.57
PTPRA-205ENST00000399903 ZNF572Q7Z3I7 529 aaPredicted RBP18.63■□□□□ 0.57
PTPRA-205ENST00000399903 HEATR3Q7Z4Q2 680 aa18.63■□□□□ 0.57
PTPRA-205ENST00000399903 CLEC10AQ8IUN9 316 aa18.63■□□□□ 0.57
PTPRA-205ENST00000399903 LRRC15Q8TF66 581 aa18.63■□□□□ 0.57
PTPRA-205ENST00000399903 XPO6Q96QU8 1125 aaKnown RBP18.63■□□□□ 0.57
PTPRA-205ENST00000399903 SEMA6BQ9H3T3 888 aa18.63■□□□□ 0.57
PTPRA-205ENST00000399903 POLLQ9UGP5 575 aa18.63■□□□□ 0.57
PTPRA-205ENST00000399903 C15orf41Q9Y2V0 281 aa18.63■□□□□ 0.57
PTPRA-205ENST00000399903 CAND2O75155 1236 aa18.63■□□□□ 0.57
PTPRA-205ENST00000399903 DRD4P21917 467 aa18.63■□□□□ 0.57
PTPRA-205ENST00000399903 TECP42680 631 aa18.63■□□□□ 0.57
PTPRA-205ENST00000399903 MAP2K1Q02750 393 aaPredicted RBP18.63■□□□□ 0.57
PTPRA-205ENST00000399903 CCDC38Q502W7 563 aa18.63■□□□□ 0.57
PTPRA-205ENST00000399903 LRRC34Q8IZ02 419 aa18.63■□□□□ 0.57
PTPRA-205ENST00000399903 BLIDQ8IZY5 108 aa18.63■□□□□ 0.57
PTPRA-205ENST00000399903 LSM14BQ9BX40 385 aaKnown RBP18.63■□□□□ 0.57
PTPRA-205ENST00000399903 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.63■□□□□ 0.57
PTPRA-205ENST00000399903 EPS15P42566 896 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 BTDP43251 543 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 MFSD14BQ5SR56 506 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 RCSD1Q6JBY9 416 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 TMTC3Q6ZXV5 915 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 MREGQ8N565 214 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 HOOK2Q96ED9 719 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 ISCUQ9H1K1 167 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 CD209Q9NNX6 404 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 KLHL30Q0D2K2 578 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 BIRC3Q13489 604 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 DAAM2Q86T65 1068 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 TRIM51Q9BSJ1 452 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 ABCF3Q9NUQ8 709 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.62■□□□□ 0.57
PTPRA-205ENST00000399903 A0A087X0T9 212 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 FAM228BP0C875 321 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 GTF2IP78347 998 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 LRRC14Q15048 493 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 TXNRD1Q16881 649 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 DOK7Q18PE1 504 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 CCDC84Q86UT8 332 aaPredicted RBP18.62■□□□□ 0.57
PTPRA-205ENST00000399903 TNFRSF25Q93038 417 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 NOP53Q9NZM5 478 aaKnown RBP18.62■□□□□ 0.57
PTPRA-205ENST00000399903 SWAP70Q9UH65 585 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 GGA2Q9UJY4 613 aa18.62■□□□□ 0.57
PTPRA-205ENST00000399903 ORC4O43929 436 aa18.61■□□□□ 0.57
PTPRA-205ENST00000399903 TSPY3P0CV98 308 aa18.61■□□□□ 0.57
PTPRA-205ENST00000399903 TSPY8P0CW00 308 aa18.61■□□□□ 0.57
PTPRA-205ENST00000399903 PDXDC1Q6P996 788 aa18.61■□□□□ 0.57
PTPRA-205ENST00000399903 ZNF804AQ7Z570 1209 aa18.61■□□□□ 0.57
PTPRA-205ENST00000399903 PRMT1Q99873 361 aaKnown RBP18.61■□□□□ 0.57
PTPRA-205ENST00000399903 TRIM9Q9C026 710 aa18.61■□□□□ 0.57
PTPRA-205ENST00000399903 EVI5O60447 810 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms