RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 ZNHIT6Q9NWK9 470 aaKnown RBP13□□□□□ -0.33
COL25A1-202ENST00000399127 RSPH14Q9UHP6 348 aa13□□□□□ -0.33
COL25A1-202ENST00000399127 FEM1BQ9UK73 627 aa13□□□□□ -0.33
COL25A1-202ENST00000399127 SIK3Q9Y2K2 1263 aa13□□□□□ -0.33
COL25A1-202ENST00000399127 COL4A3BPQ9Y5P4 624 aa13□□□□□ -0.33
COL25A1-202ENST00000399127 DDX39AO00148 427 aaKnown RBP13□□□□□ -0.33
COL25A1-202ENST00000399127 NFIBO00712 420 aa13□□□□□ -0.33
COL25A1-202ENST00000399127 TADA3O75528 432 aa13□□□□□ -0.33
COL25A1-202ENST00000399127 ARP10275 920 aa13□□□□□ -0.33
COL25A1-202ENST00000399127 HERVK_113P62684 666 aa13□□□□□ -0.33
COL25A1-202ENST00000399127 APBA1Q02410 837 aa13□□□□□ -0.33
COL25A1-202ENST00000399127 OTOP1Q7RTM1 612 aa13□□□□□ -0.33
COL25A1-202ENST00000399127 GPC2Q8N158 579 aa13□□□□□ -0.33
COL25A1-202ENST00000399127 DYDC2Q96IM9 177 aa13□□□□□ -0.33
COL25A1-202ENST00000399127 TEPSINQ96N21 525 aa13□□□□□ -0.33
COL25A1-202ENST00000399127 CRACR2AQ9BSW2 395 aa13□□□□□ -0.33
COL25A1-202ENST00000399127 GPRC5DQ9NZD1 345 aa13□□□□□ -0.33
COL25A1-202ENST00000399127 GAS7O60861 476 aa12.99□□□□□ -0.33
COL25A1-202ENST00000399127 MEA1Q16626 185 aa12.99□□□□□ -0.33
COL25A1-202ENST00000399127 CEP55Q53EZ4 464 aa12.99□□□□□ -0.33
COL25A1-202ENST00000399127 NBPF12Q5TAG4 269 aaPredicted RBP12.99□□□□□ -0.33
COL25A1-202ENST00000399127 FAM160B2Q86V87 743 aa12.99□□□□□ -0.33
COL25A1-202ENST00000399127 RETREG2Q8NC44 543 aa12.99□□□□□ -0.33
COL25A1-202ENST00000399127 ZNF397Q8NF99 534 aaPredicted RBP12.99□□□□□ -0.33
COL25A1-202ENST00000399127 HOOK2Q96ED9 719 aa12.99□□□□□ -0.33
COL25A1-202ENST00000399127 KCTD10Q9H3F6 313 aa12.99□□□□□ -0.33
COL25A1-202ENST00000399127 RABGAP1Q9Y3P9 1069 aa12.99□□□□□ -0.33
COL25A1-202ENST00000399127 ZNF536O15090 1300 aa12.99□□□□□ -0.33
COL25A1-202ENST00000399127 FRMD3A2A2Y4 597 aa12.99□□□□□ -0.33
COL25A1-202ENST00000399127 PSMD10O75832 226 aa12.99□□□□□ -0.33
COL25A1-202ENST00000399127 PRPF6O94906 941 aaKnown RBP12.99□□□□□ -0.33
COL25A1-202ENST00000399127 SLITRK3O94933 977 aa12.99□□□□□ -0.33
COL25A1-202ENST00000399127 MYBP10242 640 aa12.99□□□□□ -0.33
COL25A1-202ENST00000399127 NOP2P46087 812 aaKnown RBP12.99□□□□□ -0.33
COL25A1-202ENST00000399127 TRAF1Q13077 416 aa12.99□□□□□ -0.33
COL25A1-202ENST00000399127 TEX35Q5T0J7 233 aa12.99□□□□□ -0.33
COL25A1-202ENST00000399127 KRT26Q7Z3Y9 468 aa12.99□□□□□ -0.33
COL25A1-202ENST00000399127 HOMEZQ8IX15 550 aa12.99□□□□□ -0.33
COL25A1-202ENST00000399127 ZNF577Q9BSK1 485 aa12.99□□□□□ -0.33
COL25A1-202ENST00000399127 COL20A1Q9P218 1284 aa12.99□□□□□ -0.33
COL25A1-202ENST00000399127 PITPNM2Q9BZ72 1349 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 RCCD1A6NED2 376 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 ALAS1P13196 640 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 GTF2A1P52655 376 aaPredicted RBP12.98□□□□□ -0.33
COL25A1-202ENST00000399127 KCNA1Q09470 495 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 ADAM9Q13443 819 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 RRAGAQ7L523 313 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 KIAA1328Q86T90 577 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 HSD17B14Q9BPX1 270 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 IKZF4Q9H2S9 585 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 RAVER2Q9HCJ3 691 aaKnown RBP12.98□□□□□ -0.33
COL25A1-202ENST00000399127 GGA3Q9NZ52 723 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 PUF60Q9UHX1 559 aaKnown RBP12.98□□□□□ -0.33
COL25A1-202ENST00000399127 CTAGE9A4FU28 777 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 LRRC53A6NM62 1247 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 NR2F2P24468 414 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 HOXD13P35453 343 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 MAP3K10Q02779 954 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 MTMR2Q13614 643 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 CCDC122Q5T0U0 273 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 KRT222Q8N1A0 295 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 IL31RAQ8NI17 732 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 SLC5A5Q92911 643 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 POLR3CQ9BUI4 534 aaPredicted RBP12.98□□□□□ -0.33
COL25A1-202ENST00000399127 LACRTQ9GZZ8 138 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 NLRC4Q9NPP4 1024 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 WRAP73Q9P2S5 460 aaPredicted RBP12.98□□□□□ -0.33
COL25A1-202ENST00000399127 DUSP10Q9Y6W6 482 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 ATAD5Q96QE3 1844 aa12.98□□□□□ -0.33
COL25A1-202ENST00000399127 EFCAB8A8MWE9 144 aa12.97□□□□□ -0.33
COL25A1-202ENST00000399127 ENC1O14682 589 aa12.97□□□□□ -0.33
COL25A1-202ENST00000399127 TBCAO75347 108 aaKnown RBP12.97□□□□□ -0.33
COL25A1-202ENST00000399127 FLOT1O75955 427 aa12.97□□□□□ -0.33
COL25A1-202ENST00000399127 ICAM1P05362 532 aa12.97□□□□□ -0.33
COL25A1-202ENST00000399127 HNRNPH2P55795 449 aaKnown RBP12.97□□□□□ -0.33
COL25A1-202ENST00000399127 KCNMA1Q12791 1236 aa12.97□□□□□ -0.33
COL25A1-202ENST00000399127 C9orf131Q5VYM1 1079 aa12.97□□□□□ -0.33
COL25A1-202ENST00000399127 PRPF38AQ8NAV1 312 aaKnown RBP12.97□□□□□ -0.33
COL25A1-202ENST00000399127 UNC45AQ9H3U1 944 aa12.97□□□□□ -0.33
COL25A1-202ENST00000399127 A0A1W2PQJ5 194 aa12.97□□□□□ -0.33
COL25A1-202ENST00000399127 IPO5O00410 1097 aaKnown RBP12.97□□□□□ -0.33
COL25A1-202ENST00000399127 PLA2G6O60733 806 aa12.97□□□□□ -0.33
COL25A1-202ENST00000399127 GCNT3O95395 438 aa12.97□□□□□ -0.33
COL25A1-202ENST00000399127 EYA4O95677 639 aa12.97□□□□□ -0.33
COL25A1-202ENST00000399127 ITGB5P18084 799 aa12.97□□□□□ -0.33
COL25A1-202ENST00000399127 CYLC1P35663 651 aaPredicted RBP12.97□□□□□ -0.33
COL25A1-202ENST00000399127 FIGNQ5HY92 759 aa12.97□□□□□ -0.33
COL25A1-202ENST00000399127 RINT1Q6NUQ1 792 aa12.97□□□□□ -0.33
COL25A1-202ENST00000399127 CACNA2D4Q7Z3S7 1137 aa12.97□□□□□ -0.33
COL25A1-202ENST00000399127 BANK1Q8NDB2 785 aa12.97□□□□□ -0.33
COL25A1-202ENST00000399127 CCDC42Q96M95 316 aa12.97□□□□□ -0.33
COL25A1-202ENST00000399127 MYCBPQ99417 103 aaPredicted RBP12.97□□□□□ -0.33
COL25A1-202ENST00000399127 ARHGAP20Q9P2F6 1191 aa12.97□□□□□ -0.33
COL25A1-202ENST00000399127 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.97□□□□□ -0.33
COL25A1-202ENST00000399127 ZNF263O14978 683 aa12.96□□□□□ -0.33
COL25A1-202ENST00000399127 SLC26A4O43511 780 aa12.96□□□□□ -0.33
COL25A1-202ENST00000399127 IPO7O95373 1038 aaKnown RBP12.96□□□□□ -0.33
COL25A1-202ENST00000399127 HIRAP54198 1017 aaPredicted RBP12.96□□□□□ -0.33
COL25A1-202ENST00000399127 PRKG1Q13976 671 aa12.96□□□□□ -0.33
COL25A1-202ENST00000399127 MUM1L1Q5H9M0 696 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms