RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 CXCR5P32302 372 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 GRIN1Q05586 938 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 FAM133AQ8N9E0 248 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 AMNQ9BXJ7 453 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 GTSE1Q9NYZ3 720 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 GCNT4Q9P109 453 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 PRXQ9BXM0 1461 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 STK25O00506 426 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 ZNF18P17022 549 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 ABHD8Q96I13 439 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 CLIC4Q9Y696 253 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 KPNA7A9QM74 516 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 BTBD18B2RXH4 712 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 CCND2P30279 289 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 TRAPPC10P48553 1259 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 MRPL28Q13084 256 aaKnown RBP12.49□□□□□ -0.41
HLCS-202ENST00000399120 TTC17Q96AE7 1141 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 ULK4Q96C45 1275 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 SMYD3Q9H7B4 428 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 RIMS2Q9UQ26 1411 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 COPEO14579 308 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 CLIC2O15247 247 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 SPARCL1Q14515 664 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 LBRQ14739 615 aaKnown RBP12.49□□□□□ -0.41
HLCS-202ENST00000399120 EEF2KMTQ96G04 330 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 SLC52A2Q9HAB3 445 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 DONSONQ9NYP3 566 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 ADD3Q9UEY8 706 aaKnown RBP12.49□□□□□ -0.41
HLCS-202ENST00000399120 TRIM33Q9UPN9 1127 aa12.49□□□□□ -0.41
HLCS-202ENST00000399120 A0A0G2JND7 137 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 PI4K2BG5E9Z4 385 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 KRT37O76014 449 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 CD58P19256 250 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 ADD1P35611 737 aaKnown RBP12.48□□□□□ -0.41
HLCS-202ENST00000399120 SURF1Q15526 300 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 RGS9BPQ6ZS82 235 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 CEP170P1Q96L14 293 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 TMEM60Q9H2L4 133 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 FAM96AQ9H5X1 160 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 C19orf44Q9H6X5 657 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 MRFAP1Q9Y605 127 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 ZNF500O60304 480 aaPredicted RBP12.48□□□□□ -0.41
HLCS-202ENST00000399120 MORF4L2Q15014 288 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 DSTYKQ6XUX3 929 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 WDR11Q9BZH6 1224 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 NUGGCQ68CJ6 796 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 KIAA0825Q8IV33 1275 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 AK8Q96MA6 479 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 ZWILCHQ9H900 591 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 APOA1P02647 267 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 MAP3K10Q02779 954 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 MXD4Q14582 209 aaPredicted RBP12.48□□□□□ -0.41
HLCS-202ENST00000399120 KHDRBS2Q5VWX1 349 aaKnown RBP12.48□□□□□ -0.41
HLCS-202ENST00000399120 TBC1D1Q86TI0 1168 aaPredicted RBP12.48□□□□□ -0.41
HLCS-202ENST00000399120 IFT43Q96FT9 208 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 PITPNM3Q9BZ71 974 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 TRPM2O94759 1503 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 PNMA6EA0A0J9YXQ4 647 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 RNF103-CHMP3A0A140T963 221 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 GSPT1P15170 499 aaKnown RBP12.48□□□□□ -0.41
HLCS-202ENST00000399120 TJAP1Q5JTD0 557 aa12.48□□□□□ -0.41
HLCS-202ENST00000399120 DDX28Q9NUL7 540 aaKnown RBP12.48□□□□□ -0.41
HLCS-202ENST00000399120 UHRF1BP1LA0JNW5 1464 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 UBXN2AP68543 259 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 SLC9A5Q14940 896 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 DOK7Q18PE1 504 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 RRM2BQ7LG56 351 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 SLITRK6Q9H5Y7 841 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 PHLPP2Q6ZVD8 1323 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 RPRD2Q5VT52 1461 aaKnown RBP12.47□□□□□ -0.41
HLCS-202ENST00000399120 SERPING1P05155 500 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 OTUB1Q96FW1 271 aaPredicted RBP12.47□□□□□ -0.41
HLCS-202ENST00000399120 RPF1Q9H9Y2 349 aaKnown RBP12.47□□□□□ -0.41
HLCS-202ENST00000399120 POTEB3A0JP26 581 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 VCPP55072 806 aaKnown RBP12.47□□□□□ -0.41
HLCS-202ENST00000399120 MED21Q13503 144 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 SEPT2Q15019 361 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 EFTUD2Q15029 972 aaKnown RBP eCLIP12.47□□□□□ -0.41
HLCS-202ENST00000399120 LRRC41Q15345 812 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 CDO1Q16878 200 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 ASPRV1Q53RT3 343 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 KIAA1755Q5JYT7 1200 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 KRT39Q6A163 491 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 POTEBQ6S5H4 581 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 USP19O94966 1318 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 ABCC12Q96J65 1359 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 PCP11498 1178 aaKnown RBP12.47□□□□□ -0.41
HLCS-202ENST00000399120 C1orf146Q5VVC0 180 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 SCARA5Q6ZMJ2 495 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 FSD1LQ9BXM9 530 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 PCDHA4Q9UN74 947 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 ARHGAP26Q9UNA1 814 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 HDLBPQ00341 1268 aaKnown RBP12.47□□□□□ -0.41
HLCS-202ENST00000399120 RBM46Q8TBY0 533 aaKnown RBP12.47□□□□□ -0.41
HLCS-202ENST00000399120 PHF21AQ96BD5 680 aa12.47□□□□□ -0.41
HLCS-202ENST00000399120 ACSL3O95573 720 aa12.46□□□□□ -0.41
HLCS-202ENST00000399120 COPS2P61201 443 aa12.46□□□□□ -0.41
HLCS-202ENST00000399120 OSTNP61366 133 aa12.46□□□□□ -0.41
HLCS-202ENST00000399120 KIAA2013Q8IYS2 634 aa12.46□□□□□ -0.41
HLCS-202ENST00000399120 ELAC2Q9BQ52 826 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms