RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 MIER3Q7Z3K6 550 aa13.98□□□□□ -0.17
HLA-DQB1-203ENST00000399082 IGSF22Q8N9C0 903 aa13.98□□□□□ -0.17
HLA-DQB1-203ENST00000399082 SLC43A3Q8NBI5 491 aa13.98□□□□□ -0.17
HLA-DQB1-203ENST00000399082 LINC00301Q8NCQ3 95 aa13.98□□□□□ -0.17
HLA-DQB1-203ENST00000399082 AFAP1L1Q8TED9 768 aa13.98□□□□□ -0.17
HLA-DQB1-203ENST00000399082 SENP6Q9GZR1 1112 aaPredicted RBP13.98□□□□□ -0.17
HLA-DQB1-203ENST00000399082 RNPEPQ9H4A4 650 aa13.98□□□□□ -0.17
HLA-DQB1-203ENST00000399082 FBXO2Q9UK22 296 aaPredicted RBP13.98□□□□□ -0.17
HLA-DQB1-203ENST00000399082 PCDHA10Q9Y5I2 948 aa13.98□□□□□ -0.17
HLA-DQB1-203ENST00000399082 MORC2Q9Y6X9 1032 aaPredicted RBP13.98□□□□□ -0.17
HLA-DQB1-203ENST00000399082 MYH9P35579 1960 aaKnown RBP13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 PP2D1A8MPX8 630 aa13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 H3BRB1 525 aa13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 MARCH6O60337 910 aa13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 CABYRO75952 493 aa13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 STBD1O95210 358 aa13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 SFNP31947 248 aa13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 MFSD10Q14728 455 aa13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 SLC39A14Q15043 492 aa13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 EPHA7Q15375 998 aa13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 NBPF20Q3BBV1 942 aa13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 ARL6IP4Q66PJ3 421 aaKnown RBP13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 SWSAP1Q6NVH7 229 aa13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 MIS18BP1Q6P0N0 1132 aa13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 NECAB2Q7Z6G3 386 aa13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 RDM1Q8NG50 284 aa13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 GLT1D1Q96MS3 346 aa13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 MMTAG2Q9BU76 263 aaKnown RBP13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 TUT1Q9H6E5 874 aaKnown RBP13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 STARD7Q9NQZ5 370 aa13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 RGL1Q9NZL6 768 aa13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 GABBR1Q9UBS5 961 aa13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 MAFBQ9Y5Q3 323 aaPredicted RBP13.97□□□□□ -0.17
HLA-DQB1-203ENST00000399082 YEATS4O95619 227 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 BMP15O95972 392 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 PSAPP07602 524 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 SPATA31C1P0DKV0 1188 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 MARK3P27448 753 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 MARCKSP29966 332 aaPredicted RBP13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 HOXC8P31273 242 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 CDK7P50613 346 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 STAT5BP51692 787 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 ATN1P54259 1190 aaPredicted RBP13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 ITGA7Q13683 1181 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 PLCB4Q15147 1175 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 LRRC26Q2I0M4 334 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 KIAA0753Q2KHM9 967 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 SLC39A5Q6ZMH5 540 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 PLPPR4Q7Z2D5 763 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 DYDC2Q96IM9 177 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 ZNF396Q96N95 335 aaPredicted RBP13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 CTAGE1Q96RT6 745 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 HSD17B14Q9BPX1 270 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 EIF2AK1Q9BQI3 630 aaKnown RBP13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 SMARCAD1Q9H4L7 1026 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 ZNF302Q9NR11 478 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 CHMP5Q9NZZ3 219 aa13.96□□□□□ -0.17
HLA-DQB1-203ENST00000399082 A0A0U1RQG5 324 aaPredicted RBP13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 VWA3AA6NCI4 1184 aa13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 BACH1O14867 736 aa13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 MED24O75448 989 aa13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 CDC25AP30304 524 aa13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 CYP4A11Q02928 519 aa13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 PDIA5Q14554 519 aa13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ECM1Q16610 540 aa13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 C1orf53Q5VUE5 145 aa13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ATL3Q6DD88 541 aa13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 PDXDC2PQ6P474 469 aa13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 DTHD1Q6ZMT9 781 aa13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 BANK1Q8NDB2 785 aa13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 GLG1Q92896 1179 aa13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 CLIC6Q96NY7 704 aa13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ERAP1Q9NZ08 941 aa13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 HDAC6Q9UBN7 1215 aa13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 TCEAL9Q9UHQ7 104 aa13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 CEP131Q9UPN4 1083 aa13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 SAMM50Q9Y512 469 aa13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 SRPRBQ9Y5M8 271 aaKnown RBP13.95□□□□□ -0.18
HLA-DQB1-203ENST00000399082 TRIP12Q14669 1992 aaPredicted RBP13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 TMEM150BA6NC51 233 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ZBTB42B2RXF5 422 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ARVCFO00192 962 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 SLITRK3O94933 977 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 SMIM10L2AP0DMW4 78 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 SMIM10L2BP0DMW5 78 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ADAM17P78536 824 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 PRKCEQ02156 737 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 CTTNQ14247 550 aaKnown RBP13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 TMEM266Q2M3C6 531 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 TRIM60Q495X7 471 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 FAM160B1Q5W0V3 765 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 USP49Q70CQ1 688 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 SESTD1Q86VW0 696 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 FAM126BQ8IXS8 530 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ATP8B4Q8TF62 1192 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ZBTB10Q96DT7 871 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 LXNQ9BS40 222 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 KATNAL1Q9BW62 490 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 CSRNP2Q9H175 543 aa13.94□□□□□ -0.18
HLA-DQB1-203ENST00000399082 AZI2Q9H6S1 392 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms