RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 ZNF618Q5T7W0 954 aa18.95■□□□□ 0.62
APTR-201ENST00000398043 GLG1Q92896 1179 aa18.95■□□□□ 0.62
APTR-201ENST00000398043 SLC5A5Q92911 643 aa18.95■□□□□ 0.62
APTR-201ENST00000398043 ZSCAN31Q96LW9 406 aaPredicted RBP18.95■□□□□ 0.62
APTR-201ENST00000398043 TBC1D32Q96NH3 1257 aa18.95■□□□□ 0.62
APTR-201ENST00000398043 RBAK-RBAKDNI3L0D1 243 aa18.94■□□□□ 0.62
APTR-201ENST00000398043 NBNO60934 754 aa18.94■□□□□ 0.62
APTR-201ENST00000398043 CXCL10P02778 98 aa18.94■□□□□ 0.62
APTR-201ENST00000398043 MARK3P27448 753 aa18.94■□□□□ 0.62
APTR-201ENST00000398043 STAT5BP51692 787 aa18.94■□□□□ 0.62
APTR-201ENST00000398043 PLCB4Q15147 1175 aa18.94■□□□□ 0.62
APTR-201ENST00000398043 RABEP1Q15276 862 aa18.94■□□□□ 0.62
APTR-201ENST00000398043 INF2Q27J81 1249 aa18.94■□□□□ 0.62
APTR-201ENST00000398043 ZNF746Q6NUN9 644 aaPredicted RBP18.94■□□□□ 0.62
APTR-201ENST00000398043 OTOP2Q7RTS6 562 aa18.94■□□□□ 0.62
APTR-201ENST00000398043 DEFB128Q7Z7B8 93 aa18.94■□□□□ 0.62
APTR-201ENST00000398043 CCDC60Q8IWA6 550 aaPredicted RBP18.94■□□□□ 0.62
APTR-201ENST00000398043 CCDC83Q8IWF9 413 aa18.94■□□□□ 0.62
APTR-201ENST00000398043 RIT2Q99578 217 aa18.94■□□□□ 0.62
APTR-201ENST00000398043 LLPHQ9BRT6 129 aaKnown RBP18.94■□□□□ 0.62
APTR-201ENST00000398043 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.93■□□□□ 0.62
APTR-201ENST00000398043 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.93■□□□□ 0.62
APTR-201ENST00000398043 PSMD10O75832 226 aa18.93■□□□□ 0.62
APTR-201ENST00000398043 PARNO95453 639 aaKnown RBP18.93■□□□□ 0.62
APTR-201ENST00000398043 GNAT1P11488 350 aa18.93■□□□□ 0.62
APTR-201ENST00000398043 ATP4AP20648 1035 aa18.93■□□□□ 0.62
APTR-201ENST00000398043 GRIK4Q16099 956 aa18.93■□□□□ 0.62
APTR-201ENST00000398043 TCTN1Q2MV58 587 aa18.93■□□□□ 0.62
APTR-201ENST00000398043 B3GNT9Q6UX72 402 aa18.93■□□□□ 0.62
APTR-201ENST00000398043 RPAINQ86UA6 219 aa18.93■□□□□ 0.62
APTR-201ENST00000398043 ETNPPLQ8TBG4 499 aa18.93■□□□□ 0.62
APTR-201ENST00000398043 AZI2Q9H6S1 392 aa18.93■□□□□ 0.62
APTR-201ENST00000398043 SH2B1Q9NRF2 756 aaPredicted RBP18.93■□□□□ 0.62
APTR-201ENST00000398043 FAM205CA6NFA0 338 aa18.92■□□□□ 0.62
APTR-201ENST00000398043 CAND2O75155 1236 aa18.92■□□□□ 0.62
APTR-201ENST00000398043 CD2BP2O95400 341 aaKnown RBP18.92■□□□□ 0.62
APTR-201ENST00000398043 MMP1P03956 469 aa18.92■□□□□ 0.62
APTR-201ENST00000398043 INSRRP14616 1297 aa18.92■□□□□ 0.62
APTR-201ENST00000398043 SLC26A2P50443 739 aa18.92■□□□□ 0.62
APTR-201ENST00000398043 KRT76Q01546 638 aa18.92■□□□□ 0.62
APTR-201ENST00000398043 PPFIA1Q13136 1202 aa18.92■□□□□ 0.62
APTR-201ENST00000398043 NR5A1Q13285 461 aa18.92■□□□□ 0.62
APTR-201ENST00000398043 RUFY4Q6ZNE9 571 aa18.92■□□□□ 0.62
APTR-201ENST00000398043 SMAP1Q8IYB5 467 aaPredicted RBP18.92■□□□□ 0.62
APTR-201ENST00000398043 IL27Q8NEV9 243 aa18.92■□□□□ 0.62
APTR-201ENST00000398043 GJA10Q969M2 543 aa18.92■□□□□ 0.62
APTR-201ENST00000398043 OSBPL7Q9BZF2 842 aa18.92■□□□□ 0.62
APTR-201ENST00000398043 MAFBQ9Y5Q3 323 aaPredicted RBP18.92■□□□□ 0.62
APTR-201ENST00000398043 CCDC194A0A1B0GVG4 234 aa18.91■□□□□ 0.62
APTR-201ENST00000398043 GRXCR1A8MXD5 290 aa18.91■□□□□ 0.62
APTR-201ENST00000398043 SLC37A4O43826 429 aa18.91■□□□□ 0.62
APTR-201ENST00000398043 FAM26DQ5JW98 314 aa18.91■□□□□ 0.62
APTR-201ENST00000398043 KRT40Q6A162 431 aa18.91■□□□□ 0.62
APTR-201ENST00000398043 PPP4R3AQ6IN85 833 aa18.91■□□□□ 0.62
APTR-201ENST00000398043 MIS18BP1Q6P0N0 1132 aa18.91■□□□□ 0.62
APTR-201ENST00000398043 PIK3AP1Q6ZUJ8 805 aa18.91■□□□□ 0.62
APTR-201ENST00000398043 Q7L0L9 218 aa18.91■□□□□ 0.62
APTR-201ENST00000398043 NEK8Q86SG6 692 aa18.91■□□□□ 0.62
APTR-201ENST00000398043 CHD9Q3L8U1 2897 aa18.91■□□□□ 0.62
APTR-201ENST00000398043 POTEB3A0JP26 581 aa18.9■□□□□ 0.62
APTR-201ENST00000398043 RRN3P2A6NIE6 340 aa18.9■□□□□ 0.62
APTR-201ENST00000398043 ZBTB42B2RXF5 422 aa18.9■□□□□ 0.62
APTR-201ENST00000398043 KRT2P35908 639 aa18.9■□□□□ 0.62
APTR-201ENST00000398043 THPOP40225 353 aa18.9■□□□□ 0.62
APTR-201ENST00000398043 MKRN4PQ13434 485 aaPredicted RBP18.9■□□□□ 0.62
APTR-201ENST00000398043 SWSAP1Q6NVH7 229 aa18.9■□□□□ 0.62
APTR-201ENST00000398043 POTEBQ6S5H4 581 aa18.9■□□□□ 0.62
APTR-201ENST00000398043 DEFB123Q8N688 67 aa18.9■□□□□ 0.62
APTR-201ENST00000398043 KCNMB3Q9NPA1 279 aa18.9■□□□□ 0.62
APTR-201ENST00000398043 ZNF302Q9NR11 478 aa18.9■□□□□ 0.62
APTR-201ENST00000398043 MTMR10Q9NXD2 777 aa18.9■□□□□ 0.62
APTR-201ENST00000398043 TUBE1Q9UJT0 475 aa18.9■□□□□ 0.62
APTR-201ENST00000398043 PCDHA10Q9Y5I2 948 aa18.9■□□□□ 0.62
APTR-201ENST00000398043 IGSF9BQ9UPX0 1349 aa18.9■□□□□ 0.62
APTR-201ENST00000398043 RSPH10B2B2RC85 870 aa18.89■□□□□ 0.61
APTR-201ENST00000398043 BTBD18B2RXH4 712 aa18.89■□□□□ 0.61
APTR-201ENST00000398043 RSPH10BP0C881 870 aa18.89■□□□□ 0.61
APTR-201ENST00000398043 GCFC2P16383 781 aaKnown RBP18.89■□□□□ 0.61
APTR-201ENST00000398043 LETM2Q2VYF4 491 aa18.89■□□□□ 0.61
APTR-201ENST00000398043 LRCH2Q5VUJ6 765 aa18.89■□□□□ 0.61
APTR-201ENST00000398043 FAM160B1Q5W0V3 765 aa18.89■□□□□ 0.61
APTR-201ENST00000398043 TAF2Q6P1X5 1199 aa18.89■□□□□ 0.61
APTR-201ENST00000398043 ATP8B4Q8TF62 1192 aa18.89■□□□□ 0.61
APTR-201ENST00000398043 ZBTB10Q96DT7 871 aa18.89■□□□□ 0.61
APTR-201ENST00000398043 BACH2Q9BYV9 841 aa18.89■□□□□ 0.61
APTR-201ENST00000398043 MTIF3Q9H2K0 278 aaKnown RBP18.89■□□□□ 0.61
APTR-201ENST00000398043 TTYH1Q9H313 450 aaPredicted RBP18.89■□□□□ 0.61
APTR-201ENST00000398043 UNC45AQ9H3U1 944 aa18.89■□□□□ 0.61
APTR-201ENST00000398043 UPF2Q9HAU5 1272 aaKnown RBP18.89■□□□□ 0.61
APTR-201ENST00000398043 DDX25Q9UHL0 483 aaKnown RBP18.89■□□□□ 0.61
APTR-201ENST00000398043 BACH1O14867 736 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 HBP1O60381 514 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 GAS7O60861 476 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 BAIAP3O94812 1187 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 CHRNA1P02708 482 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 PSAPP07602 524 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 DNAJB2P25686 324 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 PBX2P40425 430 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 MGAT3Q09327 533 aa18.88■□□□□ 0.61
APTR-201ENST00000398043 PDXDC2PQ6P474 469 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms