RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 GKAP1Q5VSY0 366 aaPredicted RBP18.97■□□□□ 0.63
EWSR1-206ENST00000397938 MAGOHBQ96A72 148 aaKnown RBP18.97■□□□□ 0.63
EWSR1-206ENST00000397938 DAPK3O43293 454 aa18.96■□□□□ 0.63
EWSR1-206ENST00000397938 RASA1P20936 1047 aa18.96■□□□□ 0.63
EWSR1-206ENST00000397938 MYH14Q7Z406 1995 aaKnown RBP18.96■□□□□ 0.63
EWSR1-206ENST00000397938 PROCA1Q8NCQ7 364 aaPredicted RBP18.96■□□□□ 0.63
EWSR1-206ENST00000397938 N4BP2L2Q92802 583 aaPredicted RBP18.96■□□□□ 0.63
EWSR1-206ENST00000397938 PIGSQ96S52 555 aa18.96■□□□□ 0.63
EWSR1-206ENST00000397938 FGFBP2Q9BYJ0 223 aa18.96■□□□□ 0.63
EWSR1-206ENST00000397938 SLITRK6Q9H5Y7 841 aa18.96■□□□□ 0.63
EWSR1-206ENST00000397938 PANK4Q9NVE7 773 aa18.96■□□□□ 0.63
EWSR1-206ENST00000397938 EDIL3O43854 480 aa18.96■□□□□ 0.63
EWSR1-206ENST00000397938 GHRP10912 638 aa18.96■□□□□ 0.63
EWSR1-206ENST00000397938 DRD4P21917 467 aa18.96■□□□□ 0.63
EWSR1-206ENST00000397938 ECM1Q16610 540 aa18.96■□□□□ 0.63
EWSR1-206ENST00000397938 ZNF571Q7Z3V5 609 aaPredicted RBP18.96■□□□□ 0.63
EWSR1-206ENST00000397938 SEC14L1Q92503 715 aa18.96■□□□□ 0.63
EWSR1-206ENST00000397938 CCT6BQ92526 530 aa18.96■□□□□ 0.63
EWSR1-206ENST00000397938 F8VZ95 297 aa18.95■□□□□ 0.62
EWSR1-206ENST00000397938 KRIT1O00522 736 aa18.95■□□□□ 0.62
EWSR1-206ENST00000397938 DNAJC8O75937 253 aaPredicted RBP18.95■□□□□ 0.62
EWSR1-206ENST00000397938 SSBP05455 408 aaKnown RBP eCLIP18.95■□□□□ 0.62
EWSR1-206ENST00000397938 IFFO1Q0D2I5 559 aa18.95■□□□□ 0.62
EWSR1-206ENST00000397938 KRT71Q3SY84 523 aa18.95■□□□□ 0.62
EWSR1-206ENST00000397938 USP17L2Q6R6M4 530 aa18.95■□□□□ 0.62
EWSR1-206ENST00000397938 IRF2BP2Q7Z5L9 587 aa18.95■□□□□ 0.62
EWSR1-206ENST00000397938 RASGEF1CQ8N431 466 aa18.95■□□□□ 0.62
EWSR1-206ENST00000397938 TPCN2Q8NHX9 752 aa18.95■□□□□ 0.62
EWSR1-206ENST00000397938 SH3RF3Q8TEJ3 882 aaPredicted RBP18.95■□□□□ 0.62
EWSR1-206ENST00000397938 PSMD1Q99460 953 aa18.95■□□□□ 0.62
EWSR1-206ENST00000397938 KDM4CQ9H3R0 1056 aa18.95■□□□□ 0.62
EWSR1-206ENST00000397938 AMACRQ9UHK6 382 aa18.95■□□□□ 0.62
EWSR1-206ENST00000397938 JAG2Q9Y219 1238 aa18.95■□□□□ 0.62
EWSR1-206ENST00000397938 SMARCA1P28370 1054 aa18.95■□□□□ 0.62
EWSR1-206ENST00000397938 CEP57Q86XR8 500 aa18.95■□□□□ 0.62
EWSR1-206ENST00000397938 ZC3H3Q8IXZ2 948 aaKnown RBP18.95■□□□□ 0.62
EWSR1-206ENST00000397938 NAGPAQ9UK23 515 aa18.95■□□□□ 0.62
EWSR1-206ENST00000397938 SNED1Q8TER0 1413 aa18.94■□□□□ 0.62
EWSR1-206ENST00000397938 A0A0G2JS52 829 aa18.94■□□□□ 0.62
EWSR1-206ENST00000397938 ITGA4P13612 1032 aa18.94■□□□□ 0.62
EWSR1-206ENST00000397938 EPS15P42566 896 aa18.94■□□□□ 0.62
EWSR1-206ENST00000397938 PTPROQ16827 1216 aa18.94■□□□□ 0.62
EWSR1-206ENST00000397938 CPLX4Q7Z7G2 160 aa18.94■□□□□ 0.62
EWSR1-206ENST00000397938 NELFCDQ8IXH7 590 aa18.94■□□□□ 0.62
EWSR1-206ENST00000397938 TLCD1Q96CP7 247 aa18.94■□□□□ 0.62
EWSR1-206ENST00000397938 HVCN1Q96D96 273 aa18.94■□□□□ 0.62
EWSR1-206ENST00000397938 CNOT10Q9H9A5 744 aaKnown RBP18.94■□□□□ 0.62
EWSR1-206ENST00000397938 VEZTQ9HBM0 779 aa18.94■□□□□ 0.62
EWSR1-206ENST00000397938 VAT1LQ9HCJ6 419 aa18.94■□□□□ 0.62
EWSR1-206ENST00000397938 SWAP70Q9UH65 585 aa18.94■□□□□ 0.62
EWSR1-206ENST00000397938 PHF20L1A8MW92 1017 aa18.94■□□□□ 0.62
EWSR1-206ENST00000397938 MRPL12P52815 198 aaKnown RBP18.94■□□□□ 0.62
EWSR1-206ENST00000397938 CCDC26Q8TAB7 109 aa18.94■□□□□ 0.62
EWSR1-206ENST00000397938 SCLT1Q96NL6 688 aa18.94■□□□□ 0.62
EWSR1-206ENST00000397938 BTG4Q9NY30 223 aa18.94■□□□□ 0.62
EWSR1-206ENST00000397938 TBC1D7Q9P0N9 293 aa18.94■□□□□ 0.62
EWSR1-206ENST00000397938 ZNF652Q9Y2D9 606 aa18.94■□□□□ 0.62
EWSR1-206ENST00000397938 PCDHA2Q9Y5H9 948 aa18.94■□□□□ 0.62
EWSR1-206ENST00000397938 BZW2Q9Y6E2 419 aaKnown RBP18.94■□□□□ 0.62
EWSR1-206ENST00000397938 ATP8B3O60423 1300 aa18.93■□□□□ 0.62
EWSR1-206ENST00000397938 KCNH2Q12809 1159 aa18.93■□□□□ 0.62
EWSR1-206ENST00000397938 SPTY2D1Q68D10 685 aaPredicted RBP18.93■□□□□ 0.62
EWSR1-206ENST00000397938 DPY19L2P1Q6NXN4 242 aa18.93■□□□□ 0.62
EWSR1-206ENST00000397938 PAXIP1Q6ZW49 1069 aaPredicted RBP18.93■□□□□ 0.62
EWSR1-206ENST00000397938 SLFN11Q7Z7L1 901 aa18.93■□□□□ 0.62
EWSR1-206ENST00000397938 KCTD10Q9H3F6 313 aa18.93■□□□□ 0.62
EWSR1-206ENST00000397938 FAM114A2Q9NRY5 505 aa18.93■□□□□ 0.62
EWSR1-206ENST00000397938 STXBP5LQ9Y2K9 1186 aa18.93■□□□□ 0.62
EWSR1-206ENST00000397938 F8W031 263 aaPredicted RBP18.93■□□□□ 0.62
EWSR1-206ENST00000397938 TTI1O43156 1089 aa18.93■□□□□ 0.62
EWSR1-206ENST00000397938 MGRN1O60291 552 aa18.93■□□□□ 0.62
EWSR1-206ENST00000397938 EZRP15311 586 aaKnown RBP18.93■□□□□ 0.62
EWSR1-206ENST00000397938 DHX9Q08211 1270 aaKnown RBP18.93■□□□□ 0.62
EWSR1-206ENST00000397938 ERMARDQ5T6L9 678 aa18.93■□□□□ 0.62
EWSR1-206ENST00000397938 PEX26Q7Z412 305 aa18.93■□□□□ 0.62
EWSR1-206ENST00000397938 CENPTQ96BT3 561 aa18.93■□□□□ 0.62
EWSR1-206ENST00000397938 LRRC4CQ9HCJ2 640 aa18.93■□□□□ 0.62
EWSR1-206ENST00000397938 ACTN1P12814 892 aa18.92■□□□□ 0.62
EWSR1-206ENST00000397938 ALKBH5Q6P6C2 394 aaKnown RBP18.92■□□□□ 0.62
EWSR1-206ENST00000397938 CHMP6Q96FZ7 201 aa18.92■□□□□ 0.62
EWSR1-206ENST00000397938 XPO6Q96QU8 1125 aaKnown RBP18.92■□□□□ 0.62
EWSR1-206ENST00000397938 FAM129AQ9BZQ8 928 aa18.92■□□□□ 0.62
EWSR1-206ENST00000397938 SUCLA2Q9P2R7 463 aaPredicted RBP18.92■□□□□ 0.62
EWSR1-206ENST00000397938 NENFQ9UMX5 172 aa18.92■□□□□ 0.62
EWSR1-206ENST00000397938 ROBO1Q9Y6N7 1651 aa18.92■□□□□ 0.62
EWSR1-206ENST00000397938 hCG_1984214I3L0E3 225 aa18.92■□□□□ 0.62
EWSR1-206ENST00000397938 OPLAHO14841 1288 aa18.92■□□□□ 0.62
EWSR1-206ENST00000397938 ATP2C2O75185 946 aa18.92■□□□□ 0.62
EWSR1-206ENST00000397938 SLC8A1P32418 973 aa18.92■□□□□ 0.62
EWSR1-206ENST00000397938 EIF3BP55884 814 aaKnown RBP18.92■□□□□ 0.62
EWSR1-206ENST00000397938 ITPK1Q13572 414 aa18.92■□□□□ 0.62
EWSR1-206ENST00000397938 SPDYCQ5MJ68 293 aa18.92■□□□□ 0.62
EWSR1-206ENST00000397938 DNAAF5Q86Y56 855 aa18.92■□□□□ 0.62
EWSR1-206ENST00000397938 ZNF713Q8N859 430 aaPredicted RBP18.92■□□□□ 0.62
EWSR1-206ENST00000397938 SCFD1Q8WVM8 642 aa18.92■□□□□ 0.62
EWSR1-206ENST00000397938 SPAG5Q96R06 1193 aa18.92■□□□□ 0.62
EWSR1-206ENST00000397938 BMP2KQ9NSY1 1161 aaPredicted RBP18.92■□□□□ 0.62
EWSR1-206ENST00000397938 ADCY7P51828 1080 aa18.91■□□□□ 0.62
EWSR1-206ENST00000397938 CCDC65Q8IXS2 484 aa18.91■□□□□ 0.62
EWSR1-206ENST00000397938 TXLNGYQ9BZA5 131 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms