RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ISM2Q6H9L7 571 aa21.55■■□□□ 1.04
PDLIM2-204ENST00000397760 POTEGQ6S5H5 508 aa21.55■■□□□ 1.04
PDLIM2-204ENST00000397760 ZNF710Q8N1W2 664 aa21.55■■□□□ 1.04
PDLIM2-204ENST00000397760 CCDC150Q8NCX0 1101 aa21.55■■□□□ 1.04
PDLIM2-204ENST00000397760 SPATA20Q8TB22 786 aa21.55■■□□□ 1.04
PDLIM2-204ENST00000397760 CCDC94Q9BW85 323 aaPredicted RBP21.55■■□□□ 1.04
PDLIM2-204ENST00000397760 NFASCO94856 1347 aa21.54■■□□□ 1.04
PDLIM2-204ENST00000397760 E9PMD0 336 aa21.54■■□□□ 1.04
PDLIM2-204ENST00000397760 SLITRK3O94933 977 aa21.54■■□□□ 1.04
PDLIM2-204ENST00000397760 SKILP12757 684 aa21.54■■□□□ 1.04
PDLIM2-204ENST00000397760 AMPD3Q01432 767 aa21.54■■□□□ 1.04
PDLIM2-204ENST00000397760 CTTNQ14247 550 aaKnown RBP21.54■■□□□ 1.04
PDLIM2-204ENST00000397760 TPD52L1Q16890 204 aaPredicted RBP21.54■■□□□ 1.04
PDLIM2-204ENST00000397760 ZNF467Q7Z7K2 595 aaPredicted RBP21.54■■□□□ 1.04
PDLIM2-204ENST00000397760 TPH2Q8IWU9 490 aa21.54■■□□□ 1.04
PDLIM2-204ENST00000397760 ANKRD7Q92527 254 aa21.54■■□□□ 1.04
PDLIM2-204ENST00000397760 SAMM50Q9Y512 469 aa21.54■■□□□ 1.04
PDLIM2-204ENST00000397760 CCNE2O96020 404 aa21.53■■□□□ 1.04
PDLIM2-204ENST00000397760 MYL1P05976 194 aa21.53■■□□□ 1.04
PDLIM2-204ENST00000397760 CCZ1BP86790 482 aa21.53■■□□□ 1.04
PDLIM2-204ENST00000397760 CCZ1P86791 482 aaPredicted RBP21.53■■□□□ 1.04
PDLIM2-204ENST00000397760 SP2Q02086 613 aa21.53■■□□□ 1.04
PDLIM2-204ENST00000397760 ARMCX2Q7L311 632 aa21.53■■□□□ 1.04
PDLIM2-204ENST00000397760 SENP7Q9BQF6 1050 aa21.53■■□□□ 1.04
PDLIM2-204ENST00000397760 BCAS3Q9H6U6 928 aa21.53■■□□□ 1.04
PDLIM2-204ENST00000397760 MAN1B1Q9UKM7 699 aa21.53■■□□□ 1.04
PDLIM2-204ENST00000397760 DNM3Q9UQ16 869 aa21.53■■□□□ 1.04
PDLIM2-204ENST00000397760 DIS3Q9Y2L1 958 aaKnown RBP21.53■■□□□ 1.04
PDLIM2-204ENST00000397760 TGFB3P10600 412 aa21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 PRKCSHP14314 528 aaPredicted RBP21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 JAK3P52333 1124 aa21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 MORN1Q5T089 497 aa21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 ZNF746Q6NUN9 644 aaPredicted RBP21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 NEK9Q8TD19 979 aa21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 C16orf45Q96MC5 204 aaPredicted RBP21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 GSDMAQ96QA5 445 aa21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 JPH1Q9HDC5 661 aaPredicted RBP21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 SLC5A4Q9NY91 659 aa21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 WDR64B1ANS9 1081 aa21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 NRDCO43847 1150 aa21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 TUBB4AP04350 444 aa21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 MUTP22033 750 aa21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 SFNP31947 248 aa21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 NYAP1Q6ZVC0 841 aa21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 FBXO16Q8IX29 292 aaPredicted RBP21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 KCTD17Q8N5Z5 321 aa21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 C7orf25Q9BPX7 421 aa21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 SLC9A2Q9UBY0 812 aa21.52■■□□□ 1.04
PDLIM2-204ENST00000397760 P4HBP07237 508 aaKnown RBP21.51■■□□□ 1.03
PDLIM2-204ENST00000397760 PLA2G4BP0C869 781 aa21.51■■□□□ 1.03
PDLIM2-204ENST00000397760 PSMC6P62333 389 aa21.51■■□□□ 1.03
PDLIM2-204ENST00000397760 BANK1Q8NDB2 785 aa21.51■■□□□ 1.03
PDLIM2-204ENST00000397760 MAML3Q96JK9 1138 aa21.51■■□□□ 1.03
PDLIM2-204ENST00000397760 TRIM9Q9C026 710 aa21.51■■□□□ 1.03
PDLIM2-204ENST00000397760 LRRC27Q9C0I9 530 aa21.51■■□□□ 1.03
PDLIM2-204ENST00000397760 PLXNB2O15031 1838 aa21.51■■□□□ 1.03
PDLIM2-204ENST00000397760 SORBS3O60504 671 aa21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 RPN1P04843 607 aaKnown RBP21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 SSBP05455 408 aaKnown RBP eCLIP21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 UBA1P22314 1058 aaKnown RBP21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 MAP2K5Q13163 448 aa21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 NCAPHQ15003 741 aa21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 KCNV1Q6PIU1 500 aa21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 MAMDC4Q6UXC1 1216 aa21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 CYFIP1Q7L576 1253 aa21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 TRIML1Q8N9V2 468 aa21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 RDM1Q8NG50 284 aa21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 NPLOC4Q8TAT6 608 aa21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 LXNQ9BS40 222 aa21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 MYMKA6NI61 221 aa21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 SP4Q02446 784 aa21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 MORC3Q14149 939 aa21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 NEDD9Q14511 834 aa21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 CEP135Q66GS9 1140 aa21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 SMAP1Q8IYB5 467 aaPredicted RBP21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 GIMAP8Q8ND71 665 aaPredicted RBP21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 CCDC112Q8NEF3 446 aa21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 WRAP73Q9P2S5 460 aaPredicted RBP21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 PCDHA10Q9Y5I2 948 aa21.5■■□□□ 1.03
PDLIM2-204ENST00000397760 ZNFX1Q9P2E3 1918 aaKnown RBP21.49■■□□□ 1.03
PDLIM2-204ENST00000397760 TNPO2O14787 897 aaKnown RBP21.49■■□□□ 1.03
PDLIM2-204ENST00000397760 CBFA2T2O43439 604 aa21.49■■□□□ 1.03
PDLIM2-204ENST00000397760 VEGFBP49765 207 aa21.49■■□□□ 1.03
PDLIM2-204ENST00000397760 HTRA3P83110 453 aa21.49■■□□□ 1.03
PDLIM2-204ENST00000397760 PTPN14Q15678 1187 aa21.49■■□□□ 1.03
PDLIM2-204ENST00000397760 LY6KQ17RY6 165 aa21.49■■□□□ 1.03
PDLIM2-204ENST00000397760 FILIP1Q7Z7B0 1213 aa21.49■■□□□ 1.03
PDLIM2-204ENST00000397760 NACC1Q96RE7 527 aa21.49■■□□□ 1.03
PDLIM2-204ENST00000397760 ZSWIM4Q9H7M6 989 aa21.49■■□□□ 1.03
PDLIM2-204ENST00000397760 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.49■■□□□ 1.03
PDLIM2-204ENST00000397760 DDX41Q9UJV9 622 aaKnown RBP21.49■■□□□ 1.03
PDLIM2-204ENST00000397760 EYA4O95677 639 aa21.48■■□□□ 1.03
PDLIM2-204ENST00000397760 BMP6P22004 513 aa21.48■■□□□ 1.03
PDLIM2-204ENST00000397760 MAP2K2P36507 400 aa21.48■■□□□ 1.03
PDLIM2-204ENST00000397760 QARSP47897 775 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-204ENST00000397760 SLC12A3P55017 1021 aa21.48■■□□□ 1.03
PDLIM2-204ENST00000397760 ACTR2P61160 394 aa21.48■■□□□ 1.03
PDLIM2-204ENST00000397760 ASIC1P78348 528 aa21.48■■□□□ 1.03
PDLIM2-204ENST00000397760 CCAR2Q8N163 923 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-204ENST00000397760 PIGOQ8TEQ8 1089 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms