RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 MIER1Q8N108 512 aa10.97□□□□□ -0.65
NEDD9-203ENST00000397378 RIN2Q8WYP3 895 aaPredicted RBP10.97□□□□□ -0.65
NEDD9-203ENST00000397378 EVI5LQ96CN4 794 aa10.97□□□□□ -0.65
NEDD9-203ENST00000397378 UBA5Q9GZZ9 404 aa10.97□□□□□ -0.65
NEDD9-203ENST00000397378 POMKQ9H5K3 350 aa10.97□□□□□ -0.65
NEDD9-203ENST00000397378 PXMP2Q9NR77 195 aa10.97□□□□□ -0.65
NEDD9-203ENST00000397378 MRPL11Q9Y3B7 192 aaKnown RBP10.97□□□□□ -0.65
NEDD9-203ENST00000397378 SALL3Q9BXA9 1300 aa10.97□□□□□ -0.65
NEDD9-203ENST00000397378 BAZ2BQ9UIF8 2168 aaKnown RBP10.97□□□□□ -0.65
NEDD9-203ENST00000397378 CEP250Q9BV73 2442 aa10.97□□□□□ -0.65
NEDD9-203ENST00000397378 CHD6Q8TD26 2715 aa10.96□□□□□ -0.65
NEDD9-203ENST00000397378 STK25O00506 426 aa10.96□□□□□ -0.65
NEDD9-203ENST00000397378 ENPP3O14638 875 aa10.96□□□□□ -0.65
NEDD9-203ENST00000397378 TGFB3P10600 412 aa10.96□□□□□ -0.65
NEDD9-203ENST00000397378 HSPD1P10809 573 aaKnown RBP10.96□□□□□ -0.65
NEDD9-203ENST00000397378 NPR3P17342 541 aa10.96□□□□□ -0.65
NEDD9-203ENST00000397378 EIF2AK2P19525 551 aaKnown RBP10.96□□□□□ -0.65
NEDD9-203ENST00000397378 NT5C2P49902 561 aa10.96□□□□□ -0.65
NEDD9-203ENST00000397378 GHRHRQ02643 423 aa10.96□□□□□ -0.65
NEDD9-203ENST00000397378 HSDL1Q3SXM5 330 aa10.96□□□□□ -0.65
NEDD9-203ENST00000397378 MCMDC2Q4G0Z9 681 aa10.96□□□□□ -0.65
NEDD9-203ENST00000397378 CELF3Q5SZQ8 465 aaKnown RBP10.96□□□□□ -0.65
NEDD9-203ENST00000397378 CES5AQ6NT32 575 aa10.96□□□□□ -0.65
NEDD9-203ENST00000397378 MFSD6Q6ZSS7 791 aa10.96□□□□□ -0.65
NEDD9-203ENST00000397378 ADGRF4Q8IZF3 695 aa10.96□□□□□ -0.65
NEDD9-203ENST00000397378 TDRD5Q8NAT2 981 aaKnown RBP10.96□□□□□ -0.65
NEDD9-203ENST00000397378 C16orf70Q9BSU1 422 aa10.96□□□□□ -0.65
NEDD9-203ENST00000397378 CPVLQ9H3G5 476 aa10.96□□□□□ -0.65
NEDD9-203ENST00000397378 RNPEPQ9H4A4 650 aa10.96□□□□□ -0.65
NEDD9-203ENST00000397378 LIMD1Q9UGP4 676 aa10.96□□□□□ -0.65
NEDD9-203ENST00000397378 FBXL21Q9UKT6 434 aa10.96□□□□□ -0.65
NEDD9-203ENST00000397378 CDV3Q9UKY7 258 aaKnown RBP10.96□□□□□ -0.65
NEDD9-203ENST00000397378 ATRXP46100 2492 aa10.96□□□□□ -0.66
NEDD9-203ENST00000397378 LOXHD1Q8IVV2 1947 aa10.96□□□□□ -0.66
NEDD9-203ENST00000397378 H3BRB1 525 aa10.95□□□□□ -0.66
NEDD9-203ENST00000397378 HOXB8P17481 243 aaPredicted RBP10.95□□□□□ -0.66
NEDD9-203ENST00000397378 RFX1P22670 979 aa10.95□□□□□ -0.66
NEDD9-203ENST00000397378 HSD17B4P51659 736 aa10.95□□□□□ -0.66
NEDD9-203ENST00000397378 HAND2P61296 217 aa10.95□□□□□ -0.66
NEDD9-203ENST00000397378 QRICH1Q2TAL8 776 aa10.95□□□□□ -0.66
NEDD9-203ENST00000397378 ASPRV1Q53RT3 343 aa10.95□□□□□ -0.66
NEDD9-203ENST00000397378 CCDC178Q5BJE1 867 aa10.95□□□□□ -0.66
NEDD9-203ENST00000397378 SPOUT1Q5T280 376 aaKnown RBP10.95□□□□□ -0.66
NEDD9-203ENST00000397378 PLPP4Q5VZY2 271 aa10.95□□□□□ -0.66
NEDD9-203ENST00000397378 TMEM184AQ6ZMB5 413 aa10.95□□□□□ -0.66
NEDD9-203ENST00000397378 SAMD3Q8N6K7 520 aa10.95□□□□□ -0.66
NEDD9-203ENST00000397378 PNMA1Q8ND90 353 aa10.95□□□□□ -0.66
NEDD9-203ENST00000397378 ESR2Q92731 530 aa10.95□□□□□ -0.66
NEDD9-203ENST00000397378 SPATA33Q96N06 139 aa10.95□□□□□ -0.66
NEDD9-203ENST00000397378 NECTIN4Q96NY8 510 aa10.95□□□□□ -0.66
NEDD9-203ENST00000397378 PDCD2LQ9BRP1 358 aa10.95□□□□□ -0.66
NEDD9-203ENST00000397378 RNF41Q9H4P4 317 aaPredicted RBP10.95□□□□□ -0.66
NEDD9-203ENST00000397378 TUT1Q9H6E5 874 aaKnown RBP10.95□□□□□ -0.66
NEDD9-203ENST00000397378 MAP3K20Q9NYL2 800 aaKnown RBP10.95□□□□□ -0.66
NEDD9-203ENST00000397378 NCDNQ9UBB6 729 aa10.95□□□□□ -0.66
NEDD9-203ENST00000397378 A0A0D9SFI3 127 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 DCDC2BA2VCK2 349 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 OPLAHO14841 1288 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 GGPS1O95749 300 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 CFBP00751 764 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 ADRB1P08588 477 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 GNAT1P11488 350 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 IBSPP21815 317 aaPredicted RBP10.94□□□□□ -0.66
NEDD9-203ENST00000397378 ERVFC1P60507 584 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 UBE3AQ05086 875 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 TPRNQ4KMQ1 711 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 FAM26DQ5JW98 314 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 STOX1Q6ZVD7 989 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 VSIG10LQ86VR7 867 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 TBC1D10CQ8IV04 446 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 SIX5Q8N196 739 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 FAM227BQ96M60 508 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 JMJD4Q9H9V9 463 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 ERVK-5Q9HDB9 667 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 SH2B1Q9NRF2 756 aaPredicted RBP10.94□□□□□ -0.66
NEDD9-203ENST00000397378 SETD4Q9NVD3 440 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 PCDHB12Q9Y5F1 795 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 CHD8Q9HCK8 2581 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 PKD1L2Q7Z442 2459 aa10.94□□□□□ -0.66
NEDD9-203ENST00000397378 USP24Q9UPU5 2620 aa10.93□□□□□ -0.66
NEDD9-203ENST00000397378 NEDD4P46934 1319 aa10.93□□□□□ -0.66
NEDD9-203ENST00000397378 CCDC171Q6TFL3 1326 aa10.93□□□□□ -0.66
NEDD9-203ENST00000397378 SPTBN2O15020 2390 aa10.93□□□□□ -0.66
NEDD9-203ENST00000397378 FGF18O76093 207 aa10.93□□□□□ -0.66
NEDD9-203ENST00000397378 CHRNA1P02708 482 aa10.93□□□□□ -0.66
NEDD9-203ENST00000397378 HOXB3P14651 431 aaPredicted RBP10.93□□□□□ -0.66
NEDD9-203ENST00000397378 UBA1P22314 1058 aaKnown RBP10.93□□□□□ -0.66
NEDD9-203ENST00000397378 GATMP50440 423 aa10.93□□□□□ -0.66
NEDD9-203ENST00000397378 SP2Q02086 613 aa10.93□□□□□ -0.66
NEDD9-203ENST00000397378 DMWDQ09019 674 aa10.93□□□□□ -0.66
NEDD9-203ENST00000397378 KCNC3Q14003 757 aa10.93□□□□□ -0.66
NEDD9-203ENST00000397378 LPIN1Q14693 890 aa10.93□□□□□ -0.66
NEDD9-203ENST00000397378 PDE12Q6L8Q7 609 aaKnown RBP10.93□□□□□ -0.66
NEDD9-203ENST00000397378 ZNF589Q86UQ0 364 aaPredicted RBP10.93□□□□□ -0.66
NEDD9-203ENST00000397378 IQCA1Q86XH1 822 aa10.93□□□□□ -0.66
NEDD9-203ENST00000397378 NPAS4Q8IUM7 802 aa10.93□□□□□ -0.66
NEDD9-203ENST00000397378 THNSL1Q8IYQ7 743 aa10.93□□□□□ -0.66
NEDD9-203ENST00000397378 ZDHHC14Q8IZN3 488 aa10.93□□□□□ -0.66
NEDD9-203ENST00000397378 PLCD3Q8N3E9 789 aa10.93□□□□□ -0.66
NEDD9-203ENST00000397378 ZKSCAN3Q9BRR0 538 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms