RNA–Protein interactions for RNA: ENST00000397238.6

AGAP3-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-202ENST00000397238 RBAK-RBAKDNI3L0D1 243 aa21.67■■□□□ 1.06
AGAP3-202ENST00000397238 CTNND1O60716 968 aaKnown RBP21.67■■□□□ 1.06
AGAP3-202ENST00000397238 FAM228AQ86W67 206 aa21.67■■□□□ 1.06
AGAP3-202ENST00000397238 VEZTQ9HBM0 779 aa21.67■■□□□ 1.06
AGAP3-202ENST00000397238 PGRMC1O00264 195 aaKnown RBP21.66■■□□□ 1.06
AGAP3-202ENST00000397238 KCNH2Q12809 1159 aa21.66■■□□□ 1.06
AGAP3-202ENST00000397238 SEMA3FQ13275 785 aa21.66■■□□□ 1.06
AGAP3-202ENST00000397238 SBK1Q52WX2 424 aa21.66■■□□□ 1.06
AGAP3-202ENST00000397238 MSL1Q68DK7 614 aa21.66■■□□□ 1.06
AGAP3-202ENST00000397238 PNMA8AQ86V59 439 aaPredicted RBP21.66■■□□□ 1.06
AGAP3-202ENST00000397238 TEX2Q8IWB9 1127 aa21.66■■□□□ 1.06
AGAP3-202ENST00000397238 RIC8AQ9NPQ8 531 aa21.66■■□□□ 1.06
AGAP3-202ENST00000397238 SRP68Q9UHB9 627 aaKnown RBP21.66■■□□□ 1.06
AGAP3-202ENST00000397238 ITGB4P16144 1822 aa21.66■■□□□ 1.06
AGAP3-202ENST00000397238 ALKBH5Q6P6C2 394 aaKnown RBP21.66■■□□□ 1.06
AGAP3-202ENST00000397238 TCP11Q8WWU5 503 aa21.66■■□□□ 1.06
AGAP3-202ENST00000397238 BMP2KQ9NSY1 1161 aaPredicted RBP21.66■■□□□ 1.06
AGAP3-202ENST00000397238 STK17AQ9UEE5 414 aa21.66■■□□□ 1.06
AGAP3-202ENST00000397238 ABCA3Q99758 1704 aa21.66■■□□□ 1.06
AGAP3-202ENST00000397238 USP17L5A8MUK1 530 aa21.65■■□□□ 1.06
AGAP3-202ENST00000397238 RAD21O60216 631 aa21.65■■□□□ 1.06
AGAP3-202ENST00000397238 PREPLQ4J6C6 727 aaPredicted RBP21.65■■□□□ 1.06
AGAP3-202ENST00000397238 SPTY2D1Q68D10 685 aaPredicted RBP21.65■■□□□ 1.06
AGAP3-202ENST00000397238 FBXO33Q7Z6M2 555 aa21.65■■□□□ 1.06
AGAP3-202ENST00000397238 CUL1Q13616 776 aa21.65■■□□□ 1.06
AGAP3-202ENST00000397238 EYA3Q99504 573 aa21.65■■□□□ 1.06
AGAP3-202ENST00000397238 RAB34Q9BZG1 259 aa21.65■■□□□ 1.06
AGAP3-202ENST00000397238 NUCKS1Q9H1E3 243 aaKnown RBP21.65■■□□□ 1.06
AGAP3-202ENST00000397238 MCM8Q9UJA3 840 aa21.65■■□□□ 1.06
AGAP3-202ENST00000397238 KIAA1024Q9UPX6 916 aa21.65■■□□□ 1.06
AGAP3-202ENST00000397238 CLTAP09496 248 aa21.65■■□□□ 1.06
AGAP3-202ENST00000397238 EZRP15311 586 aaKnown RBP21.65■■□□□ 1.06
AGAP3-202ENST00000397238 GRIK5Q16478 980 aa21.65■■□□□ 1.06
AGAP3-202ENST00000397238 GJB7Q6PEY0 223 aa21.65■■□□□ 1.06
AGAP3-202ENST00000397238 GPR101Q96P66 508 aaPredicted RBP21.65■■□□□ 1.06
AGAP3-202ENST00000397238 ACTR5Q9H9F9 607 aaPredicted RBP21.65■■□□□ 1.06
AGAP3-202ENST00000397238 GPCPD1Q9NPB8 672 aa21.65■■□□□ 1.06
AGAP3-202ENST00000397238 DONSONQ9NYP3 566 aa21.65■■□□□ 1.06
AGAP3-202ENST00000397238 TAF1P21675 1872 aa21.64■■□□□ 1.06
AGAP3-202ENST00000397238 HGSO14964 777 aaPredicted RBP21.64■■□□□ 1.05
AGAP3-202ENST00000397238 IFNAR2P48551 515 aa21.64■■□□□ 1.05
AGAP3-202ENST00000397238 CLNS1AP54105 237 aaKnown RBP21.64■■□□□ 1.05
AGAP3-202ENST00000397238 SGSM3Q96HU1 749 aa21.64■■□□□ 1.05
AGAP3-202ENST00000397238 PAGR1Q9BTK6 254 aa21.64■■□□□ 1.05
AGAP3-202ENST00000397238 NR2E1Q9Y466 385 aa21.64■■□□□ 1.05
AGAP3-202ENST00000397238 PLCH1Q4KWH8 1693 aa21.64■■□□□ 1.05
AGAP3-202ENST00000397238 CAND2O75155 1236 aa21.64■■□□□ 1.05
AGAP3-202ENST00000397238 ABCB4P21439 1286 aa21.64■■□□□ 1.05
AGAP3-202ENST00000397238 USP11P51784 963 aa21.64■■□□□ 1.05
AGAP3-202ENST00000397238 FAM133BQ5BKY9 247 aaKnown RBP21.64■■□□□ 1.05
AGAP3-202ENST00000397238 LRIG3Q6UXM1 1119 aa21.64■■□□□ 1.05
AGAP3-202ENST00000397238 LINC00116Q8NCU8 138 aa21.64■■□□□ 1.05
AGAP3-202ENST00000397238 SCFD2Q8WU76 684 aa21.64■■□□□ 1.05
AGAP3-202ENST00000397238 CACNA1SQ13698 1873 aa21.64■■□□□ 1.05
AGAP3-202ENST00000397238 GBP2P32456 591 aaPredicted RBP21.63■■□□□ 1.05
AGAP3-202ENST00000397238 U2AF1L4Q8WU68 220 aaKnown RBP21.63■■□□□ 1.05
AGAP3-202ENST00000397238 MTMR9Q96QG7 549 aa21.63■■□□□ 1.05
AGAP3-202ENST00000397238 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.63■■□□□ 1.055e-7■■■□□ 17.7
AGAP3-202ENST00000397238 EDEM3Q9BZQ6 932 aa21.63■■□□□ 1.05
AGAP3-202ENST00000397238 PAPPAQ13219 1627 aa21.63■■□□□ 1.05
AGAP3-202ENST00000397238 BYSLQ13895 437 aaKnown RBP21.63■■□□□ 1.05
AGAP3-202ENST00000397238 NAA25Q14CX7 972 aa21.63■■□□□ 1.05
AGAP3-202ENST00000397238 CLEC10AQ8IUN9 316 aa21.63■■□□□ 1.05
AGAP3-202ENST00000397238 ZNF652Q9Y2D9 606 aa21.63■■□□□ 1.05
AGAP3-202ENST00000397238 FGGP02679 453 aa21.63■■□□□ 1.05
AGAP3-202ENST00000397238 RASA1P20936 1047 aa21.63■■□□□ 1.05
AGAP3-202ENST00000397238 NR2F2P24468 414 aa21.63■■□□□ 1.05
AGAP3-202ENST00000397238 SLCO1A2P46721 670 aa21.63■■□□□ 1.05
AGAP3-202ENST00000397238 BIRC3Q13489 604 aa21.63■■□□□ 1.05
AGAP3-202ENST00000397238 EMC10Q5UCC4 262 aa21.63■■□□□ 1.05
AGAP3-202ENST00000397238 PSMD1Q99460 953 aa21.63■■□□□ 1.05
AGAP3-202ENST00000397238 SEPT11Q9NVA2 429 aaKnown RBP21.63■■□□□ 1.05
AGAP3-202ENST00000397238 TMEM59LQ9UK28 342 aa21.63■■□□□ 1.05
AGAP3-202ENST00000397238 UTP11Q9Y3A2 253 aaKnown RBP21.63■■□□□ 1.05
AGAP3-202ENST00000397238 SHBGP04278 402 aa21.62■■□□□ 1.05
AGAP3-202ENST00000397238 LDHBP07195 334 aaKnown RBP21.62■■□□□ 1.05
AGAP3-202ENST00000397238 ZNF211Q13398 564 aaPredicted RBP21.62■■□□□ 1.05
AGAP3-202ENST00000397238 TBC1D1Q86TI0 1168 aaPredicted RBP21.62■■□□□ 1.05
AGAP3-202ENST00000397238 CDCA7Q9BWT1 371 aaPredicted RBP21.62■■□□□ 1.05
AGAP3-202ENST00000397238 EMILIN3Q9NT22 766 aa21.62■■□□□ 1.05
AGAP3-202ENST00000397238 RPS8P62241 208 aaKnown RBP21.62■■□□□ 1.05
AGAP3-202ENST00000397238 LRRC47Q8N1G4 583 aaKnown RBP21.62■■□□□ 1.05
AGAP3-202ENST00000397238 DNAJC19Q96DA6 116 aa21.62■■□□□ 1.05
AGAP3-202ENST00000397238 PBKQ96KB5 322 aa21.62■■□□□ 1.05
AGAP3-202ENST00000397238 NAGPAQ9UK23 515 aa21.62■■□□□ 1.05
AGAP3-202ENST00000397238 PSEN1P49768 467 aa21.61■■□□□ 1.05
AGAP3-202ENST00000397238 TMC3Q7Z5M5 1100 aa21.61■■□□□ 1.05
AGAP3-202ENST00000397238 GPBP1Q86WP2 473 aa21.61■■□□□ 1.05
AGAP3-202ENST00000397238 TRIM59Q8IWR1 403 aa21.61■■□□□ 1.05
AGAP3-202ENST00000397238 CCDC26Q8TAB7 109 aa21.61■■□□□ 1.05
AGAP3-202ENST00000397238 CEP95Q96GE4 821 aa21.61■■□□□ 1.05
AGAP3-202ENST00000397238 A1CFQ9NQ94 594 aaKnown RBP21.61■■□□□ 1.05
AGAP3-202ENST00000397238 HDAC9Q9UKV0 1011 aa21.61■■□□□ 1.05
AGAP3-202ENST00000397238 SKAP2O75563 359 aaPredicted RBP21.61■■□□□ 1.05
AGAP3-202ENST00000397238 VIMP08670 466 aaKnown RBP21.61■■□□□ 1.05
AGAP3-202ENST00000397238 MYBP10242 640 aa21.61■■□□□ 1.05
AGAP3-202ENST00000397238 PLTPP55058 493 aa21.61■■□□□ 1.05
AGAP3-202ENST00000397238 PLCB4Q15147 1175 aa21.61■■□□□ 1.05
AGAP3-202ENST00000397238 COBLL1Q53SF7 1204 aa21.61■■□□□ 1.05
AGAP3-202ENST00000397238 GLG1Q92896 1179 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms