RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 SPATS2LQ9NUQ6 558 aaKnown RBP10.03□□□□□ -0.8
CAPN3-206ENST00000397163 CCDC87Q9NVE4 849 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 IRAK4Q9NWZ3 460 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 THRAP3Q9Y2W1 955 aaKnown RBP10.03□□□□□ -0.8
CAPN3-206ENST00000397163 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.03□□□□□ -0.8
CAPN3-206ENST00000397163 BCL9O00512 1426 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 SPATA31A5Q5VU36 1347 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 SPATA31A7Q8IWB4 1347 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 NUP98P52948 1817 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 POTEMA6NI47 508 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 TMCO5BA8MYB1 307 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 MPHOSPH10O00566 681 aaKnown RBP10.03□□□□□ -0.8
CAPN3-206ENST00000397163 CAMTA2O94983 1202 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 ZNF844Q08AG5 666 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 THEMIS2Q5TEJ8 643 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 KRT79Q5XKE5 535 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 MAEAQ7L5Y9 396 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 CACNA2D3Q8IZS8 1091 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 SLC44A5Q8NCS7 719 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 SPDYE1Q8NFV5 336 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-206ENST00000397163 TCP11Q8WWU5 503 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.03□□□□□ -0.8
CAPN3-206ENST00000397163 ANKS1AQ92625 1134 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 CDCA7Q9BWT1 371 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-206ENST00000397163 TBC1D7Q9P0N9 293 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 SEC63Q9UGP8 760 aaKnown RBP10.03□□□□□ -0.8
CAPN3-206ENST00000397163 FBXL5Q9UKA1 691 aa10.03□□□□□ -0.8
CAPN3-206ENST00000397163 NOVA2Q9UNW9 492 aaKnown RBP10.03□□□□□ -0.8
CAPN3-206ENST00000397163 PALM3A6NDB9 673 aaPredicted RBP10.02□□□□□ -0.81
CAPN3-206ENST00000397163 KIF3CO14782 793 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 TRAPPC3O43617 180 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 CAND2O75155 1236 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 KIF4AO95239 1232 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 RBM5P52756 815 aaKnown RBP eCLIP10.02□□□□□ -0.81
CAPN3-206ENST00000397163 PPP2R2AP63151 447 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 BIRC3Q13489 604 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 UAP1Q16222 522 aaPredicted RBP10.02□□□□□ -0.81
CAPN3-206ENST00000397163 ANKRD20A8PQ5CZ79 823 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 C12orf60Q5U649 245 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 HIBCHQ6NVY1 386 aaPredicted RBP10.02□□□□□ -0.81
CAPN3-206ENST00000397163 PNMA8AQ86V59 439 aaPredicted RBP10.02□□□□□ -0.81
CAPN3-206ENST00000397163 NELFCDQ8IXH7 590 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 REXO1Q8N1G1 1221 aaKnown RBP10.02□□□□□ -0.81
CAPN3-206ENST00000397163 PROM2Q8N271 834 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 RAD54LQ92698 747 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 SEC16BQ96JE7 1060 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 LZTS2Q9BRK4 669 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 RAB34Q9BZG1 259 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 BSDC1Q9NW68 430 aaPredicted RBP10.02□□□□□ -0.81
CAPN3-206ENST00000397163 TMEM260Q9NX78 707 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 SPATA31A1Q5TZJ5 1347 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 CACNA1SQ13698 1873 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 ANKRD36CQ5JPF3 1778 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 CLTAP09496 248 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 MYBP10242 640 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 CRKLP46109 303 aaKnown RBP10.02□□□□□ -0.81
CAPN3-206ENST00000397163 GRIK3Q13003 919 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 PPP1R7Q15435 360 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 INTS5Q6P9B9 1019 aaKnown RBP10.02□□□□□ -0.81
CAPN3-206ENST00000397163 ARHGAP27Q6ZUM4 889 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 FBXO33Q7Z6M2 555 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 CPLX4Q7Z7G2 160 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 RSRC1Q96IZ7 334 aaKnown RBP10.02□□□□□ -0.81
CAPN3-206ENST00000397163 DDX47Q9H0S4 455 aaKnown RBP10.02□□□□□ -0.81
CAPN3-206ENST00000397163 SLC12A6Q9UHW9 1150 aa10.02□□□□□ -0.81
CAPN3-206ENST00000397163 H0YGN5 161 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 SART1O43290 800 aaKnown RBP10.01□□□□□ -0.81
CAPN3-206ENST00000397163 HIBADHP31937 336 aaKnown RBP10.01□□□□□ -0.81
CAPN3-206ENST00000397163 SCTRP47872 440 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 ZKSCAN8Q15776 578 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-206ENST00000397163 NBPF20Q3BBV1 942 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 KRT71Q3SY84 523 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 MSL1Q68DK7 614 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 C3orf67Q6ZVT6 689 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 RAPGEF5Q92565 580 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 PBKQ96KB5 322 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 GJD4Q96KN9 370 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-206ENST00000397163 NUDT12Q9BQG2 462 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 FAM167BQ9BTA0 163 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 LRRC27Q9C0I9 530 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 ATP6V0A4Q9HBG4 840 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 TMEM59LQ9UK28 342 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 LEMD3Q9Y2U8 911 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 NFS1Q9Y697 457 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 KRIT1O00522 736 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 ECHS1P30084 290 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 MAGOHP61326 146 aaKnown RBP10.01□□□□□ -0.81
CAPN3-206ENST00000397163 COASYQ13057 564 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 PSMD2Q13200 908 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 MTMR3Q13615 1198 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 FAM26FQ5R3K3 315 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 USP17L2Q6R6M4 530 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 KCNK18Q7Z418 384 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 DNAAF5Q86Y56 855 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 CELF1Q92879 486 aaKnown RBP10.01□□□□□ -0.81
CAPN3-206ENST00000397163 MAGOHBQ96A72 148 aaKnown RBP10.01□□□□□ -0.81
CAPN3-206ENST00000397163 NEUROG2Q9H2A3 272 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 NOD2Q9HC29 1040 aa10.01□□□□□ -0.81
CAPN3-206ENST00000397163 CPSF2Q9P2I0 782 aaKnown RBP10.01□□□□□ -0.81
CAPN3-206ENST00000397163 CNOT8Q9UFF9 292 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms