RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 ZNF865P0CJ78 1059 aaPredicted RBP16.58■□□□□ 0.24
TM9SF1-202ENST00000396854 KRT79Q5XKE5 535 aa16.58■□□□□ 0.24
TM9SF1-202ENST00000396854 RDM1Q8NG50 284 aa16.58■□□□□ 0.24
TM9SF1-202ENST00000396854 ERMNQ8TAM6 284 aa16.58■□□□□ 0.24
TM9SF1-202ENST00000396854 KIAA1468Q9P260 1216 aa16.58■□□□□ 0.24
TM9SF1-202ENST00000396854 SLC9A2Q9UBY0 812 aa16.58■□□□□ 0.24
TM9SF1-202ENST00000396854 TCEAL9Q9UHQ7 104 aa16.58■□□□□ 0.24
TM9SF1-202ENST00000396854 MYH9P35579 1960 aaKnown RBP16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 SMTNL1A8MU46 457 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 CHMP2AO43633 222 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 FARP2O94887 1054 aaPredicted RBP16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 CCNE2O96020 404 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 TXNP10599 105 aaKnown RBP16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 SFNP31947 248 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 JAK3P52333 1124 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 EPHA7Q15375 998 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 LY6KQ17RY6 165 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 HYIQ5T013 277 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 IQSEC1Q6DN90 963 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 METTL7BQ6UX53 244 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 SMAP1Q8IYB5 467 aaPredicted RBP16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 AOPEPQ8N6M6 819 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 SNX29Q8TEQ0 813 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 PYM1Q9BRP8 204 aaKnown RBP16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 BCAS3Q9H6U6 928 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 ZHX1Q9UKY1 873 aaPredicted RBP16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 KDM3AQ9Y4C1 1321 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 A0A087X0B3 334 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 WDR64B1ANS9 1081 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 GGPS1O95749 300 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 ADCYAP1R1P41586 468 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 CELF3Q5SZQ8 465 aaKnown RBP16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 MFSD14CQ5VZR4 134 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 CYFIP1Q7L576 1253 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 MIER3Q7Z3K6 550 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 ELOA2Q8IYF1 753 aaPredicted RBP16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 NEK9Q8TD19 979 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 PXYLP1Q8TE99 480 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 C16orf45Q96MC5 204 aaPredicted RBP16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 DISC1Q9NRI5 854 aa16.57■□□□□ 0.24
TM9SF1-202ENST00000396854 NKRFO15226 690 aaKnown RBP eCLIP16.56■□□□□ 0.24
TM9SF1-202ENST00000396854 RPA1P27694 616 aa16.56■□□□□ 0.24
TM9SF1-202ENST00000396854 KARSQ15046 597 aaKnown RBP16.56■□□□□ 0.24
TM9SF1-202ENST00000396854 DUSP28Q4G0W2 176 aa16.56■□□□□ 0.24
TM9SF1-202ENST00000396854 ANKRD7Q92527 254 aa16.56■□□□□ 0.24
TM9SF1-202ENST00000396854 CALML4Q96GE6 196 aa16.56■□□□□ 0.24
TM9SF1-202ENST00000396854 HSD17B14Q9BPX1 270 aa16.56■□□□□ 0.24
TM9SF1-202ENST00000396854 EIF2AK1Q9BQI3 630 aaKnown RBP16.56■□□□□ 0.24
TM9SF1-202ENST00000396854 POLR3CQ9BUI4 534 aaPredicted RBP16.56■□□□□ 0.24
TM9SF1-202ENST00000396854 PAXBP1Q9Y5B6 917 aa16.56■□□□□ 0.24
TM9SF1-202ENST00000396854 A0A087WWV3 80 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 POLR2DO15514 142 aaKnown RBP16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 ATG7O95352 703 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 CYBAP13498 195 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 TNNT1P13805 278 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 SYCP1Q15431 976 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 E2F4Q16254 413 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 PRAMEF19Q5SWL8 479 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 EMID1Q96A84 441 aaPredicted RBP16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 TUFT1Q9NNX1 390 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 MED24O75448 989 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 SPATA31C1P0DKV0 1188 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 MUTP22033 750 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 CCT6AP40227 531 aaKnown RBP16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 GRB10Q13322 594 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 TMEM119Q4V9L6 283 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 TMEM63BQ5T3F8 832 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 CATSPER3Q86XQ3 398 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 KCTD17Q8N5Z5 321 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 PDILTQ8N807 584 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 RAET1EQ8TD07 263 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 PNMA5Q96PV4 448 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 NT5C3AQ9H0P0 336 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 MLXIPQ9HAP2 919 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 KCND1Q9NSA2 647 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 PCDHA10Q9Y5I2 948 aa16.55■□□□□ 0.24
TM9SF1-202ENST00000396854 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 ADCY3O60266 1144 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 GH1P01241 217 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 SMPD1P17405 629 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 ACTR2P61160 394 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 ARHGAP1Q07960 439 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 ECM1Q16610 540 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 TPD52L1Q16890 204 aaPredicted RBP16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 IQUBQ8NA54 791 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 ERCC4Q92889 916 aaPredicted RBP16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 COPS5Q92905 334 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 SAMM50Q9Y512 469 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 TRIM17Q9Y577 477 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 ARID2Q68CP9 1835 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 ADCY6O43306 1168 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 SLITRK3O94933 977 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 HMGCRP04035 888 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 PLCG1P19174 1290 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 GSDMDP57764 484 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 NLRP12P59046 1061 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 CCZ1BP86790 482 aa16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 CCZ1P86791 482 aaPredicted RBP16.54■□□□□ 0.24
TM9SF1-202ENST00000396854 LAMC2Q13753 1193 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms