RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 HDLBPQ00341 1268 aaKnown RBP16.9■□□□□ 0.3
GNE-202ENST00000396594 TBC1D9BQ66K14 1250 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 SCYL2Q6P3W7 929 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 EFHBQ8N7U6 833 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 GJA10Q969M2 543 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 PAGE5Q96GU1 130 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 SLC38A10Q9HBR0 1119 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 ECE2O60344 883 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 GGPS1O95749 300 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 P4HBP07237 508 aaKnown RBP16.9■□□□□ 0.3
GNE-202ENST00000396594 MCAMP43121 646 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 RAD51AP2Q09MP3 1159 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 SIX6OS1Q8N1H7 587 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 PRPF38AQ8NAV1 312 aaKnown RBP16.9■□□□□ 0.3
GNE-202ENST00000396594 GJD4Q96KN9 370 aaPredicted RBP16.9■□□□□ 0.3
GNE-202ENST00000396594 ADKP55263 362 aaKnown RBP16.9■□□□□ 0.3
GNE-202ENST00000396594 RFX6Q8HWS3 928 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 PPP1R2P1Q96PQ5 205 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 H7C0C1 242 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 INHBAP08476 426 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 ATP5OP48047 213 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 STYK1Q6J9G0 422 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 RDH13Q8NBN7 331 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 K7ERI5 159 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 PDIA5Q14554 519 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 KCTD1Q719H9 257 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 CTAGE3PQ8IX95 158 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 SYNGAP1Q96PV0 1343 aa16.9■□□□□ 0.3
GNE-202ENST00000396594 hCG_1642624A0A1W2PR95 340 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 CA4P22748 312 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 XPAP23025 273 aaPredicted RBP16.89■□□□□ 0.29
GNE-202ENST00000396594 LRMPQ12912 555 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 STRIP1Q5VSL9 837 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 ARHGEF18Q6ZSZ5 1173 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 CCDC24Q8N4L8 307 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 PCDHA6Q9UN73 950 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 PCDHA8Q9Y5H6 950 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 CLRN2A0PK11 232 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 USP17L15C9J2P7 530 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 USP17L13C9JLJ4 530 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 USP17L11C9JVI0 530 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 USP17L18D6R9N7 530 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 USP17L22D6RA61 530 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 USP17L17D6RBQ6 530 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 USP17L19D6RCP7 530 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 USP17L20D6RJB6 530 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 ABCB4P21439 1286 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 USP17L24Q0WX57 530 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 ELF2Q15723 593 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 HHIPL2Q6UWX4 724 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 NLRP7Q8WX94 980 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 EXOC4Q96A65 974 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 ACAD9Q9H845 621 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 GCNT4Q9P109 453 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 ERCC6L2Q5T890 1561 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 LONRF3Q496Y0 759 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 EP400NLQ6ZTU2 488 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 MB21D2Q8IYB1 491 aaPredicted RBP16.89■□□□□ 0.29
GNE-202ENST00000396594 BEST2Q8NFU1 509 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 DDIT3P35638 169 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 ADCK5Q3MIX3 580 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 TOGARAM2Q6ZUX3 1019 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 CCDC127Q96BQ5 260 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 NDST4Q9H3R1 872 aa16.89■□□□□ 0.29
GNE-202ENST00000396594 MAP3K20Q9NYL2 800 aaKnown RBP16.89■□□□□ 0.29
GNE-202ENST00000396594 PRPSAP2O60256 369 aa16.88■□□□□ 0.29
GNE-202ENST00000396594 PAMP19021 973 aa16.88■□□□□ 0.29
GNE-202ENST00000396594 PLCG1P19174 1290 aa16.88■□□□□ 0.29
GNE-202ENST00000396594 ZNF131P52739 623 aa16.88■□□□□ 0.29
GNE-202ENST00000396594 RNF10Q8N5U6 811 aaKnown RBP16.88■□□□□ 0.29
GNE-202ENST00000396594 PROCA1Q8NCQ7 364 aaPredicted RBP16.88■□□□□ 0.29
GNE-202ENST00000396594 URGCPQ8TCY9 931 aa16.88■□□□□ 0.29
GNE-202ENST00000396594 BARHL2Q9NY43 387 aa16.88■□□□□ 0.29
GNE-202ENST00000396594 IGKV5-2P06315 115 aa16.88■□□□□ 0.29
GNE-202ENST00000396594 KCNB1Q14721 858 aa16.88■□□□□ 0.29
GNE-202ENST00000396594 CCDC38Q502W7 563 aa16.88■□□□□ 0.29
GNE-202ENST00000396594 MIGA2Q7L4E1 593 aa16.88■□□□□ 0.29
GNE-202ENST00000396594 RDM1Q8NG50 284 aa16.88■□□□□ 0.29
GNE-202ENST00000396594 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.88■□□□□ 0.293e-10■■■■■ 88.3
GNE-202ENST00000396594 RAD54LQ92698 747 aa16.88■□□□□ 0.29
GNE-202ENST00000396594 GCOM2Q9BZD3 368 aaPredicted RBP16.88■□□□□ 0.29
GNE-202ENST00000396594 SLC16A3O15427 465 aaKnown RBP16.88■□□□□ 0.29
GNE-202ENST00000396594 NAALADL2Q58DX5 795 aa16.88■□□□□ 0.29
GNE-202ENST00000396594 ZNF667Q5HYK9 610 aa16.88■□□□□ 0.29
GNE-202ENST00000396594 MSTO1Q9BUK6 570 aa16.88■□□□□ 0.29
GNE-202ENST00000396594 MAFGO15525 162 aa16.88■□□□□ 0.29
GNE-202ENST00000396594 MTMR1Q13613 665 aa16.88■□□□□ 0.29
GNE-202ENST00000396594 MFSD14CQ5VZR4 134 aa16.88■□□□□ 0.29
GNE-202ENST00000396594 RSRC2Q7L4I2 434 aaKnown RBP16.88■□□□□ 0.29
GNE-202ENST00000396594 CLIC6Q96NY7 704 aa16.88■□□□□ 0.29
GNE-202ENST00000396594 MAPK6Q16659 721 aa16.87■□□□□ 0.29
GNE-202ENST00000396594 SEPT14Q6ZU15 432 aa16.87■□□□□ 0.29
GNE-202ENST00000396594 TMEM35BQ8NCS4 154 aa16.87■□□□□ 0.29
GNE-202ENST00000396594 LRRC8CQ8TDW0 803 aa16.87■□□□□ 0.29
GNE-202ENST00000396594 EHD2Q9NZN4 543 aa16.87■□□□□ 0.29
GNE-202ENST00000396594 DEPDC5O75140 1603 aa16.87■□□□□ 0.29
GNE-202ENST00000396594 WDR46O15213 610 aaKnown RBP16.87■□□□□ 0.29
GNE-202ENST00000396594 DDX5P17844 614 aaKnown RBP16.87■□□□□ 0.29
GNE-202ENST00000396594 SLC8A1P32418 973 aa16.87■□□□□ 0.29
GNE-202ENST00000396594 PSMC5P62195 406 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms