RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 PACSIN2Q9UNF0 486 aaPredicted RBP9.51□□□□□ -0.89
BDNF-204ENST00000395980 NOC2LQ9Y3T9 749 aaKnown RBP9.51□□□□□ -0.89
BDNF-204ENST00000395980 NHSQ6T4R5 1651 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 POTEMA6NI47 508 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 CEP104O60308 925 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 LDHBP07195 334 aaKnown RBP9.51□□□□□ -0.89
BDNF-204ENST00000395980 DNA2P51530 1060 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 ITPK1Q13572 414 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 SNCBQ16143 134 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 PPP2R5EQ16537 467 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 KCNK18Q7Z418 384 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 GLIS3Q8NEA6 775 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 SH3RF3Q8TEJ3 882 aaPredicted RBP9.51□□□□□ -0.89
BDNF-204ENST00000395980 SEC16BQ96JE7 1060 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 PIGSQ96S52 555 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 NAP1L4Q99733 375 aaKnown RBP9.51□□□□□ -0.89
BDNF-204ENST00000395980 PCDHA2Q9Y5H9 948 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 FLOT1O75955 427 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 GFPT2O94808 682 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 GCFC2P16383 781 aaKnown RBP9.51□□□□□ -0.89
BDNF-204ENST00000395980 EPS15P42566 896 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 MMP14P50281 582 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 XRCC4Q13426 336 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 IRF2BP2Q7Z5L9 587 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 TMC3Q7Z5M5 1100 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 TPCN2Q8NHX9 752 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 EYA3Q99504 573 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 OSBPL7Q9BZF2 842 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 KCTD10Q9H3F6 313 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 KDM4CQ9H3R0 1056 aa9.51□□□□□ -0.89
BDNF-204ENST00000395980 MYH7BA7E2Y1 1941 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 DNAJC8O75937 253 aaPredicted RBP9.5□□□□□ -0.89
BDNF-204ENST00000395980 GKAP1Q5VSY0 366 aaPredicted RBP9.5□□□□□ -0.89
BDNF-204ENST00000395980 FRMD5Q7Z6J6 570 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 GPIHBP1Q8IV16 184 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 FUKQ8N0W3 1084 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 GIMAP7Q8NHV1 300 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 TLCD1Q96CP7 247 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 TMEM260Q9NX78 707 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 DONSONQ9NYP3 566 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 TFCP2L1Q9NZI6 479 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 NAGPAQ9UK23 515 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 STXBP5LQ9Y2K9 1186 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 DIS3Q9Y2L1 958 aaKnown RBP9.5□□□□□ -0.89
BDNF-204ENST00000395980 FRMD3A2A2Y4 597 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 CETN3O15182 167 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 EDIL3O43854 480 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 TDP2O95551 362 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 NBPF9Q3BBW0 867 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 DPY19L2P1Q6NXN4 242 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 CYB5D1Q6P9G0 228 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 VPS36Q86VN1 386 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 PARP9Q8IXQ6 854 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 METTL13Q8N6R0 699 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 RAPGEF5Q92565 580 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 NUDT12Q9BQG2 462 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 POLD4Q9HCU8 107 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 LEMD3Q9Y2U8 911 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 PLIN4Q96Q06 1357 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 PITPNM2Q9BZ72 1349 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 ZPR1O75312 459 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 PTK2Q05397 1052 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 ASPRV1Q53RT3 343 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 SLC44A5Q8NCS7 719 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 NEUROG2Q9H2A3 272 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 CENPHQ9H3R5 247 aa9.5□□□□□ -0.89
BDNF-204ENST00000395980 COL24A1Q17RW2 1714 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 F8VZ95 297 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 KRIT1O00522 736 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 PPFIA2O75334 1257 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 SLC8A1P32418 973 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 CDK8P49336 464 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 KCNH2Q12809 1159 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 ALKBH5Q6P6C2 394 aaKnown RBP9.49□□□□□ -0.89
BDNF-204ENST00000395980 USP17L2Q6R6M4 530 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 ZNF571Q7Z3V5 609 aaPredicted RBP9.49□□□□□ -0.89
BDNF-204ENST00000395980 HOOK3Q86VS8 718 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 UBLCP1Q8WVY7 318 aaPredicted RBP9.49□□□□□ -0.89
BDNF-204ENST00000395980 PSMD1Q99460 953 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 MXD3Q9BW11 206 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 NYXQ9GZU5 481 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 CPVLQ9H3G5 476 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 CD248Q9HCU0 757 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 CDK5RAP2Q96SN8 1893 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 RNASE9P60153 205 aaKnown RBP9.49□□□□□ -0.89
BDNF-204ENST00000395980 BYSLQ13895 437 aaKnown RBP9.49□□□□□ -0.89
BDNF-204ENST00000395980 CLUL1Q15846 466 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 SLC4A8Q2Y0W8 1093 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 ODF2Q5BJF6 829 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 PEX26Q7Z412 305 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 CROCCP2Q86T23 111 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 SCFD1Q8WVM8 642 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 SPAG5Q96R06 1193 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 TXLNGYQ9BZA5 131 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 RAB17Q9H0T7 212 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 MTMR7Q9Y216 660 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 C10orf71Q711Q0 1435 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 GSTA1P08263 222 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 H2AFZP0C0S5 128 aa9.49□□□□□ -0.89
BDNF-204ENST00000395980 UCHL3P15374 230 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms