RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 DIAPH3Q9NSV4 1193 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 FAM13BQ9NYF5 915 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 PRR12Q9ULL5 1215 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 CNPY2Q9Y2B0 182 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 CTDP1Q9Y5B0 961 aaPredicted RBP7.2□□□□□ -1.26
PTPN20-208ENST00000395727 WDR19Q8NEZ3 1342 aa7.2□□□□□ -1.26
PTPN20-208ENST00000395727 H3BRB1 525 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 NMT2O60551 498 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 SIN3BO75182 1162 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 DUSP11O75319 330 aaKnown RBP7.19□□□□□ -1.26
PTPN20-208ENST00000395727 SNAI1O95863 264 aaPredicted RBP7.19□□□□□ -1.26
PTPN20-208ENST00000395727 CELA2BP08218 269 aaPredicted RBP7.19□□□□□ -1.26
PTPN20-208ENST00000395727 PDHBP11177 359 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 MCCP23508 829 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 PCBP4P57723 403 aaKnown RBP7.19□□□□□ -1.26
PTPN20-208ENST00000395727 ZNF543Q08ER8 600 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 TRIP4Q15650 581 aaPredicted RBP7.19□□□□□ -1.26
PTPN20-208ENST00000395727 LRIT3Q3SXY7 679 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 GPATCH4Q5T3I0 446 aaKnown RBP7.19□□□□□ -1.26
PTPN20-208ENST00000395727 TTC22Q5TAA0 569 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 SLCO4C1Q6ZQN7 724 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 RAB44Q7Z6P3 723 aaPredicted RBP7.19□□□□□ -1.26
PTPN20-208ENST00000395727 RNF180Q86T96 592 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 TBC1D10CQ8IV04 446 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 CPXCR1Q8N123 301 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 ANKRD35Q8N283 1001 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 KLHDC9Q8NEP7 349 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 GPR152Q8TDT2 470 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 PIK3R5Q8WYR1 880 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 TMEM47Q9BQJ4 181 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 KATNBL1Q9H079 304 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 UPF3AQ9H1J1 476 aaKnown RBP7.19□□□□□ -1.26
PTPN20-208ENST00000395727 TUT1Q9H6E5 874 aaKnown RBP7.19□□□□□ -1.26
PTPN20-208ENST00000395727 CNNM2Q9H8M5 875 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 A1CFQ9NQ94 594 aaKnown RBP7.19□□□□□ -1.26
PTPN20-208ENST00000395727 XPNPEP3Q9NQH7 507 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 RNF146Q9NTX7 359 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 CTNNA3Q9UI47 895 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 FAM184BQ9ULE4 1060 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 SUPT16HQ9Y5B9 1047 aaKnown RBP7.19□□□□□ -1.26
PTPN20-208ENST00000395727 NEDD4P46934 1319 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 LCTP09848 1927 aa7.19□□□□□ -1.26
PTPN20-208ENST00000395727 SOWAHDA6NJG2 315 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 ASB14A6NK59 587 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 ZNF213O14771 459 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 OIP5O43482 229 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 GSPT1P15170 499 aaKnown RBP7.18□□□□□ -1.26
PTPN20-208ENST00000395727 MAGEA10P43363 369 aaPredicted RBP7.18□□□□□ -1.26
PTPN20-208ENST00000395727 RTP1P59025 263 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 ARHGAP4P98171 946 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 ACVR2BQ13705 512 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 IMMTQ16891 758 aaKnown RBP7.18□□□□□ -1.26
PTPN20-208ENST00000395727 PRAMEF19Q5SWL8 479 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 SYDE2Q5VT97 1194 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 CCSAPQ6IQ19 270 aaPredicted RBP7.18□□□□□ -1.26
PTPN20-208ENST00000395727 CWC27Q6UX04 472 aaKnown RBP7.18□□□□□ -1.26
PTPN20-208ENST00000395727 SLC39A5Q6ZMH5 540 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 C1orf229Q6ZS94 237 aaPredicted RBP7.18□□□□□ -1.26
PTPN20-208ENST00000395727 KCTD1Q719H9 257 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 ANKRD33Q7Z3H0 272 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 SYT9Q86SS6 491 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 FCHSD1Q86WN1 690 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 IQCA1Q86XH1 822 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 GLYCTKQ8IVS8 523 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 TDHQ8IZJ6 230 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 CMTR1Q8N1G2 835 aaKnown RBP7.18□□□□□ -1.26
PTPN20-208ENST00000395727 TOX2Q96NM4 488 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 SEZ6LQ9BYH1 1024 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 SENP6Q9GZR1 1112 aaPredicted RBP7.18□□□□□ -1.26
PTPN20-208ENST00000395727 INCENPQ9NQS7 918 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 CYP39A1Q9NYL5 469 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 Q9Y3F1 56 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 SYNRGQ9UMZ2 1314 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 CEP290O15078 2479 aa7.18□□□□□ -1.26
PTPN20-208ENST00000395727 FZD6O60353 706 aa7.17□□□□□ -1.26
PTPN20-208ENST00000395727 XYLBO75191 536 aa7.17□□□□□ -1.26
PTPN20-208ENST00000395727 ARHGEF15O94989 841 aa7.17□□□□□ -1.26
PTPN20-208ENST00000395727 MAP3K6O95382 1288 aa7.17□□□□□ -1.26
PTPN20-208ENST00000395727 TAL1P17542 331 aaPredicted RBP7.17□□□□□ -1.26
PTPN20-208ENST00000395727 MZF1P28698 734 aaPredicted RBP7.17□□□□□ -1.26
PTPN20-208ENST00000395727 GJA9P57773 515 aa7.17□□□□□ -1.26
PTPN20-208ENST00000395727 HAND2P61296 217 aa7.17□□□□□ -1.26
PTPN20-208ENST00000395727 IKQ13123 557 aaPredicted RBP7.17□□□□□ -1.26
PTPN20-208ENST00000395727 ASPRV1Q53RT3 343 aa7.17□□□□□ -1.26
PTPN20-208ENST00000395727 RRP12Q5JTH9 1297 aaKnown RBP7.17□□□□□ -1.26
PTPN20-208ENST00000395727 GJC2Q5T442 439 aaPredicted RBP7.17□□□□□ -1.26
PTPN20-208ENST00000395727 ARMCX2Q7L311 632 aa7.17□□□□□ -1.26
PTPN20-208ENST00000395727 HOMEZQ8IX15 550 aa7.17□□□□□ -1.26
PTPN20-208ENST00000395727 CCDC144CPQ8IYA2 1237 aa7.17□□□□□ -1.26
PTPN20-208ENST00000395727 KCTD17Q8N5Z5 321 aa7.17□□□□□ -1.26
PTPN20-208ENST00000395727 PCSK9Q8NBP7 692 aaKnown RBP7.17□□□□□ -1.26
PTPN20-208ENST00000395727 RGS22Q8NE09 1264 aa7.17□□□□□ -1.26
PTPN20-208ENST00000395727 NUP133Q8WUM0 1156 aa7.17□□□□□ -1.26
PTPN20-208ENST00000395727 RUFY2Q8WXA3 655 aa7.17□□□□□ -1.26
PTPN20-208ENST00000395727 EDEM1Q92611 657 aa7.17□□□□□ -1.26
PTPN20-208ENST00000395727 TNFRSF25Q93038 417 aa7.17□□□□□ -1.26
PTPN20-208ENST00000395727 BHMTQ93088 406 aa7.17□□□□□ -1.26
PTPN20-208ENST00000395727 KRT23Q9C075 422 aa7.17□□□□□ -1.26
PTPN20-208ENST00000395727 TOMM22Q9NS69 142 aa7.17□□□□□ -1.26
PTPN20-208ENST00000395727 ZFATQ9P243 1243 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms