RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 BMS1Q14692 1282 aaKnown RBP15.4■□□□□ 0.06
SNCA-204ENST00000394989 LRCH2Q5VUJ6 765 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 RRAGAQ7L523 313 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 FAM160B2Q86V87 743 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 RABGGTAQ92696 567 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 GOLGA1Q92805 767 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 JAKMIP2Q96AA8 810 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 PIM2Q9P1W9 311 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 WRAP73Q9P2S5 460 aaPredicted RBP15.4■□□□□ 0.06
SNCA-204ENST00000394989 MRPL11Q9Y3B7 192 aaKnown RBP15.4■□□□□ 0.06
SNCA-204ENST00000394989 RABGAP1Q9Y3P9 1069 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 STK24Q9Y6E0 443 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 BRCA1P38398 1863 aaKnown RBP15.4■□□□□ 0.06
SNCA-204ENST00000394989 EYA4O95677 639 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 RASA3Q14644 834 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 EDRF1Q3B7T1 1238 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 CEP55Q53EZ4 464 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 PURBQ96QR8 312 aaKnown RBP15.4■□□□□ 0.06
SNCA-204ENST00000394989 ZNF341Q9BYN7 854 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 SH2D4AQ9H788 454 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 HDAC6Q9UBN7 1215 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 FHOD1Q9Y613 1164 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 ARP10275 920 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 CIAPIN1Q6FI81 312 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 RINT1Q6NUQ1 792 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 KIAA1328Q86T90 577 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 DYDC2Q96IM9 177 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 CCDC42Q96M95 316 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 PARD6BQ9BYG5 372 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 TRAF3IP3Q9Y228 551 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 TRIM66O15016 1216 aa15.39■□□□□ 0.05
SNCA-204ENST00000394989 NR2F2P24468 414 aa15.39■□□□□ 0.05
SNCA-204ENST00000394989 KCNA1Q09470 495 aa15.39■□□□□ 0.05
SNCA-204ENST00000394989 KNOP1Q1ED39 458 aaKnown RBP15.39■□□□□ 0.05
SNCA-204ENST00000394989 HGSNATQ68CP4 663 aa15.39■□□□□ 0.05
SNCA-204ENST00000394989 PPP4R3CPQ6ZMV5 832 aa15.39■□□□□ 0.05
SNCA-204ENST00000394989 COL20A1Q9P218 1284 aa15.39■□□□□ 0.05
SNCA-204ENST00000394989 PRPF6O94906 941 aaKnown RBP15.39■□□□□ 0.05
SNCA-204ENST00000394989 LCA5LO95447 670 aa15.39■□□□□ 0.05
SNCA-204ENST00000394989 GNA14O95837 355 aa15.39■□□□□ 0.05
SNCA-204ENST00000394989 ATP1A1P05023 1023 aaKnown RBP15.39■□□□□ 0.05
SNCA-204ENST00000394989 EIF4A3P38919 411 aaKnown RBP15.39■□□□□ 0.05
SNCA-204ENST00000394989 TUBB2AQ13885 445 aa15.39■□□□□ 0.05
SNCA-204ENST00000394989 TRAPPC11Q7Z392 1133 aa15.39■□□□□ 0.05
SNCA-204ENST00000394989 CEP112Q8N8E3 955 aa15.39■□□□□ 0.05
SNCA-204ENST00000394989 TUBB2BQ9BVA1 445 aa15.39■□□□□ 0.05
SNCA-204ENST00000394989 DEFB129Q9H1M3 183 aa15.39■□□□□ 0.05
SNCA-204ENST00000394989 ANKZF1Q9H8Y5 726 aa15.39■□□□□ 0.05
SNCA-204ENST00000394989 MYO6Q9UM54 1294 aa15.39■□□□□ 0.05
SNCA-204ENST00000394989 SFI1A8K8P3 1242 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 KRT86O43790 486 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 PNMA6AP0CW24 399 aaPredicted RBP15.38■□□□□ 0.05
SNCA-204ENST00000394989 KIF11P52732 1056 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 VAV2P52735 878 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 ASTE1Q2TB18 679 aaPredicted RBP15.38■□□□□ 0.05
SNCA-204ENST00000394989 PDXDC1Q6P996 788 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 B3GNT9Q6UX72 402 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 PAXIP1Q6ZW49 1069 aaPredicted RBP15.38■□□□□ 0.05
SNCA-204ENST00000394989 TPH2Q8IWU9 490 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 CRACR2AQ9BSW2 395 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 TUFT1Q9NNX1 390 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNCA-204ENST00000394989 NFKBIEO00221 500 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 TLR2O60603 784 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 ZBTB7AO95365 584 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 HSD17B4P51659 736 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 TAOK3Q9H2K8 898 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 UNC45AQ9H3U1 944 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 ASTN1O14525 1302 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 ASTN2O75129 1339 aaPredicted RBP15.38■□□□□ 0.05
SNCA-204ENST00000394989 NFIBO00712 420 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 ICAM1P05362 532 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 PLA2G4AP47712 749 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 BMT2Q1RMZ1 405 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 C1orf186Q6ZWK4 172 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 NLRC4Q9NPP4 1024 aa15.38■□□□□ 0.05
SNCA-204ENST00000394989 GAS7O60861 476 aa15.37■□□□□ 0.05
SNCA-204ENST00000394989 ITGB5P18084 799 aa15.37■□□□□ 0.05
SNCA-204ENST00000394989 PRELPP51888 382 aa15.37■□□□□ 0.05
SNCA-204ENST00000394989 TGFB2P61812 414 aa15.37■□□□□ 0.05
SNCA-204ENST00000394989 SF3B2Q13435 895 aaKnown RBP15.37■□□□□ 0.05
SNCA-204ENST00000394989 WHAMMP3Q1A5X7 153 aa15.37■□□□□ 0.05
SNCA-204ENST00000394989 TMCO3Q6UWJ1 677 aa15.37■□□□□ 0.05
SNCA-204ENST00000394989 CLEC4DQ8WXI8 215 aa15.37■□□□□ 0.05
SNCA-204ENST00000394989 ZNF577Q9BSK1 485 aa15.37■□□□□ 0.05
SNCA-204ENST00000394989 EDEM3Q9BZQ6 932 aa15.37■□□□□ 0.05
SNCA-204ENST00000394989 IKZF4Q9H2S9 585 aa15.37■□□□□ 0.05
SNCA-204ENST00000394989 CEP72Q9P209 647 aa15.37■□□□□ 0.05
SNCA-204ENST00000394989 CCPG1Q9ULG6 757 aa15.37■□□□□ 0.05
SNCA-204ENST00000394989 CETN3O15182 167 aa15.37■□□□□ 0.05
SNCA-204ENST00000394989 IPO7O95373 1038 aaKnown RBP15.37■□□□□ 0.05
SNCA-204ENST00000394989 ZNF280AP59817 542 aaPredicted RBP15.37■□□□□ 0.05
SNCA-204ENST00000394989 PAPD7Q5XG87 772 aaKnown RBP15.37■□□□□ 0.05
SNCA-204ENST00000394989 DPY19L2P1Q6NXN4 242 aa15.37■□□□□ 0.05
SNCA-204ENST00000394989 OLFML3Q9NRN5 406 aa15.37■□□□□ 0.05
SNCA-204ENST00000394989 ARGLU1Q9NWB6 273 aaPredicted RBP15.37■□□□□ 0.05
SNCA-204ENST00000394989 PCDHA13Q9Y5I0 950 aa15.37■□□□□ 0.05
SNCA-204ENST00000394989 MACROD2A1Z1Q3 448 aa15.36■□□□□ 0.05
SNCA-204ENST00000394989 PDXKO00764 312 aa15.36■□□□□ 0.05
SNCA-204ENST00000394989 CYP2C19P33261 490 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms