RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 IL9RQ01113 521 aa11.21□□□□□ -0.61
COL4A6-203ENST00000394872 RWDD4Q6NW29 188 aaKnown RBP11.21□□□□□ -0.61
COL4A6-203ENST00000394872 SLC35F6Q8N357 371 aa11.21□□□□□ -0.61
COL4A6-203ENST00000394872 PDZD8Q8NEN9 1154 aa11.21□□□□□ -0.61
COL4A6-203ENST00000394872 HSPH1Q92598 858 aa11.21□□□□□ -0.61
COL4A6-203ENST00000394872 OLA1Q9NTK5 396 aaKnown RBP11.21□□□□□ -0.61
COL4A6-203ENST00000394872 PCDHA6Q9UN73 950 aa11.21□□□□□ -0.61
COL4A6-203ENST00000394872 FIS1Q9Y3D6 152 aa11.21□□□□□ -0.61
COL4A6-203ENST00000394872 PCDHA8Q9Y5H6 950 aa11.21□□□□□ -0.61
COL4A6-203ENST00000394872 NVLO15381 856 aaKnown RBP11.21□□□□□ -0.61
COL4A6-203ENST00000394872 CDO1Q16878 200 aa11.21□□□□□ -0.61
COL4A6-203ENST00000394872 DAAM1Q9Y4D1 1078 aa11.21□□□□□ -0.61
COL4A6-203ENST00000394872 VGLL3A8MV65 326 aa11.21□□□□□ -0.61
COL4A6-203ENST00000394872 IFNAR1P17181 557 aa11.21□□□□□ -0.61
COL4A6-203ENST00000394872 CDC25BP30305 580 aa11.21□□□□□ -0.61
COL4A6-203ENST00000394872 PTPN21Q16825 1174 aa11.21□□□□□ -0.61
COL4A6-203ENST00000394872 TLK1Q9UKI8 766 aa11.21□□□□□ -0.61
COL4A6-203ENST00000394872 PCDHB6Q9Y5E3 794 aa11.21□□□□□ -0.61
COL4A6-203ENST00000394872 SFI1A8K8P3 1242 aa11.21□□□□□ -0.62
COL4A6-203ENST00000394872 PLEKHA8P1O95397 391 aa11.21□□□□□ -0.62
COL4A6-203ENST00000394872 SYNE4Q8N205 404 aa11.21□□□□□ -0.62
COL4A6-203ENST00000394872 PPP1R13BQ96KQ4 1090 aa11.21□□□□□ -0.62
COL4A6-203ENST00000394872 Q9H521 79 aa11.21□□□□□ -0.62
COL4A6-203ENST00000394872 THAP9Q9H5L6 903 aa11.21□□□□□ -0.62
COL4A6-203ENST00000394872 SRPRBQ9Y5M8 271 aaKnown RBP11.21□□□□□ -0.62
COL4A6-203ENST00000394872 DENND3A2RUS2 1198 aa11.21□□□□□ -0.62
COL4A6-203ENST00000394872 ETF1P62495 437 aaKnown RBP11.21□□□□□ -0.62
COL4A6-203ENST00000394872 OSBPL3Q9H4L5 887 aa11.21□□□□□ -0.62
COL4A6-203ENST00000394872 ATP6V0A4Q9HBG4 840 aa11.21□□□□□ -0.62
COL4A6-203ENST00000394872 MAGI2Q86UL8 1455 aa11.21□□□□□ -0.62
COL4A6-203ENST00000394872 USP17L5A8MUK1 530 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 OPHN1O60890 802 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 MOCS3O95396 460 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 TMED2Q15363 201 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 CYP4F22Q6NT55 531 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 THNSL1Q8IYQ7 743 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 BANK1Q8NDB2 785 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 RMDN3Q96TC7 470 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 ZWILCHQ9H900 591 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 BCL2L12Q9HB09 334 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 RNF181Q9P0P0 153 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 LDHAP00338 332 aaKnown RBP11.2□□□□□ -0.62
COL4A6-203ENST00000394872 SERPING1P05155 500 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 DPCR1Q3MIW9 517 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 BRINP3Q76B58 766 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 DEPDC1BQ8WUY9 529 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 GBP5Q96PP8 586 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 FBXO40Q9UH90 709 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 JRKLQ9Y4A0 524 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 CAPN7Q9Y6W3 813 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 F8W8V4 182 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 MCAMP43121 646 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 SESN3P58005 492 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 RNF219Q5W0B1 726 aaPredicted RBP11.2□□□□□ -0.62
COL4A6-203ENST00000394872 SNRNP48Q6IEG0 339 aaKnown RBP11.2□□□□□ -0.62
COL4A6-203ENST00000394872 NUDCD1Q96RS6 583 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 SH3GLB2Q9NR46 395 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 FAN1Q9Y2M0 1017 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 ERVK-7P63135 1459 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 LRRD1A4D1F6 860 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 MGEA5O60502 916 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 KPNA2P52292 529 aaKnown RBP11.2□□□□□ -0.62
COL4A6-203ENST00000394872 APBA1Q02410 837 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 AP3B2Q13367 1082 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 PDE1CQ14123 709 aaPredicted RBP11.2□□□□□ -0.62
COL4A6-203ENST00000394872 NKX1-1Q15270 411 aaPredicted RBP11.2□□□□□ -0.62
COL4A6-203ENST00000394872 ERICH1Q86X53 443 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 APOBEC3FQ8IUX4 373 aaKnown RBP11.2□□□□□ -0.62
COL4A6-203ENST00000394872 PIGOQ8TEQ8 1089 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 DACT3Q96B18 629 aaPredicted RBP11.2□□□□□ -0.62
COL4A6-203ENST00000394872 PAGE5Q96GU1 130 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 CYP2D6P10635 497 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 PMLP29590 882 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 ADCY1Q08828 1119 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 SLC27A3Q5K4L6 730 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 TBC1D9BQ66K14 1250 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 TRIM68Q6AZZ1 485 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 SAMD9LQ8IVG5 1584 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 URGCPQ8TCY9 931 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 ALKBH8Q96BT7 664 aaKnown RBP11.2□□□□□ -0.62
COL4A6-203ENST00000394872 SPDL1Q96EA4 605 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 BRIP1Q9BX63 1249 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 BHMT2Q9H2M3 363 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 SHROOM2Q13796 1616 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 FTCDO95954 541 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 RCN2Q14257 317 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 NDUFAF2Q8N183 169 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 LINC00301Q8NCQ3 95 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 FAM167AQ96KS9 214 aa11.2□□□□□ -0.62
COL4A6-203ENST00000394872 RPAP1Q9BWH6 1393 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-203ENST00000394872 PGRMC1O00264 195 aaKnown RBP11.19□□□□□ -0.62
COL4A6-203ENST00000394872 HIP1RO75146 1068 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 TNFAIP2Q03169 654 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 NARFQ9UHQ1 456 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 ABCB11O95342 1321 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 COL15A1P39059 1388 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 PLTPP55058 493 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 TRIP13Q15645 432 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-203ENST00000394872 C10orf76Q5T2E6 689 aa11.19□□□□□ -0.62
COL4A6-203ENST00000394872 TTC19Q6DKK2 380 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms