RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 SECISBP2LQ93073 1101 aaKnown RBP16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 FUT8Q9BYC5 575 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 SH2D4AQ9H788 454 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 TUFT1Q9NNX1 390 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 HDAC6Q9UBN7 1215 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 PGAP2Q9UHJ9 254 aa16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 ZBTB12Q9Y330 459 aaPredicted RBP16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 MRPL11Q9Y3B7 192 aaKnown RBP16.92■□□□□ 0.3
UBE2D3-207ENST00000394801 MUTP22033 750 aa16.91■□□□□ 0.3
UBE2D3-207ENST00000394801 CAP2P40123 477 aa16.91■□□□□ 0.3
UBE2D3-207ENST00000394801 PPP2R5CQ13362 524 aa16.91■□□□□ 0.3
UBE2D3-207ENST00000394801 FRMD5Q7Z6J6 570 aa16.91■□□□□ 0.3
UBE2D3-207ENST00000394801 SFR1Q86XK3 245 aa16.91■□□□□ 0.3
UBE2D3-207ENST00000394801 TRIM58Q8NG06 486 aa16.91■□□□□ 0.3
UBE2D3-207ENST00000394801 ZBED3Q96IU2 234 aaPredicted RBP16.91■□□□□ 0.3
UBE2D3-207ENST00000394801 RPGRIP1Q96KN7 1286 aa16.91■□□□□ 0.3
UBE2D3-207ENST00000394801 PNKPQ96T60 521 aa16.91■□□□□ 0.3
UBE2D3-207ENST00000394801 BHMT2Q9H2M3 363 aa16.91■□□□□ 0.3
UBE2D3-207ENST00000394801 ZNF277Q9NRM2 450 aaPredicted RBP16.91■□□□□ 0.3
UBE2D3-207ENST00000394801 RBAK-RBAKDNI3L0D1 243 aa16.91■□□□□ 0.3
UBE2D3-207ENST00000394801 AKR1B10O60218 316 aa16.91■□□□□ 0.3
UBE2D3-207ENST00000394801 LONRF2Q1L5Z9 754 aa16.91■□□□□ 0.3
UBE2D3-207ENST00000394801 DEF6Q9H4E7 631 aa16.91■□□□□ 0.3
UBE2D3-207ENST00000394801 ZHX3Q9H4I2 956 aa16.91■□□□□ 0.3
UBE2D3-207ENST00000394801 OLFML3Q9NRN5 406 aa16.91■□□□□ 0.3
UBE2D3-207ENST00000394801 FEM1BQ9UK73 627 aa16.91■□□□□ 0.3
UBE2D3-207ENST00000394801 RABGAP1Q9Y3P9 1069 aa16.91■□□□□ 0.3
UBE2D3-207ENST00000394801 SLITRK3O94933 977 aa16.9■□□□□ 0.3
UBE2D3-207ENST00000394801 NR2F2P24468 414 aa16.9■□□□□ 0.3
UBE2D3-207ENST00000394801 CYP4A11Q02928 519 aa16.9■□□□□ 0.3
UBE2D3-207ENST00000394801 NOA1Q8NC60 698 aaKnown RBP16.9■□□□□ 0.3
UBE2D3-207ENST00000394801 TMEM39BQ9GZU3 492 aa16.9■□□□□ 0.3
UBE2D3-207ENST00000394801 RGL1Q9NZL6 768 aa16.9■□□□□ 0.3
UBE2D3-207ENST00000394801 ZNRF3Q9ULT6 936 aa16.9■□□□□ 0.3
UBE2D3-207ENST00000394801 JRKLQ9Y4A0 524 aa16.9■□□□□ 0.3
UBE2D3-207ENST00000394801 MAP2K7O14733 419 aa16.89■□□□□ 0.3
UBE2D3-207ENST00000394801 BEND6Q5SZJ8 279 aaPredicted RBP16.89■□□□□ 0.3
UBE2D3-207ENST00000394801 RINT1Q6NUQ1 792 aa16.89■□□□□ 0.3
UBE2D3-207ENST00000394801 RUSC1Q9BVN2 902 aa16.89■□□□□ 0.3
UBE2D3-207ENST00000394801 EHMT1Q9H9B1 1298 aa16.89■□□□□ 0.3
UBE2D3-207ENST00000394801 MACROD2A1Z1Q3 448 aa16.89■□□□□ 0.29
UBE2D3-207ENST00000394801 CALUO43852 315 aaPredicted RBP16.89■□□□□ 0.29
UBE2D3-207ENST00000394801 TLR2O60603 784 aa16.89■□□□□ 0.29
UBE2D3-207ENST00000394801 SERPING1P05155 500 aa16.89■□□□□ 0.29
UBE2D3-207ENST00000394801 PRLRP16471 622 aa16.89■□□□□ 0.29
UBE2D3-207ENST00000394801 GAP43P17677 238 aa16.89■□□□□ 0.29
UBE2D3-207ENST00000394801 KCNH2Q12809 1159 aa16.89■□□□□ 0.29
UBE2D3-207ENST00000394801 SLC9C1Q4G0N8 1177 aa16.89■□□□□ 0.29
UBE2D3-207ENST00000394801 CEP55Q53EZ4 464 aa16.89■□□□□ 0.29
UBE2D3-207ENST00000394801 LRCH2Q5VUJ6 765 aa16.89■□□□□ 0.29
UBE2D3-207ENST00000394801 WDR93Q6P2C0 686 aa16.89■□□□□ 0.29
UBE2D3-207ENST00000394801 CCDC174Q6PII3 467 aa16.89■□□□□ 0.29
UBE2D3-207ENST00000394801 CDAN1Q8IWY9 1227 aa16.89■□□□□ 0.29
UBE2D3-207ENST00000394801 TXLNBQ8N3L3 684 aa16.89■□□□□ 0.29
UBE2D3-207ENST00000394801 LSM14BQ9BX40 385 aaKnown RBP16.89■□□□□ 0.29
UBE2D3-207ENST00000394801 PDGFDQ9GZP0 370 aaPredicted RBP16.89■□□□□ 0.29
UBE2D3-207ENST00000394801 VEZTQ9HBM0 779 aa16.89■□□□□ 0.29
UBE2D3-207ENST00000394801 TYW1Q9NV66 732 aaKnown RBP16.89■□□□□ 0.29
UBE2D3-207ENST00000394801 AIPL1Q9NZN9 384 aa16.89■□□□□ 0.29
UBE2D3-207ENST00000394801 TACC1O75410 805 aa16.88■□□□□ 0.29
UBE2D3-207ENST00000394801 MAGEA1P43355 309 aa16.88■□□□□ 0.29
UBE2D3-207ENST00000394801 CKAP4Q07065 602 aaKnown RBP16.88■□□□□ 0.29
UBE2D3-207ENST00000394801 SFMBT2Q5VUG0 894 aa16.88■□□□□ 0.29
UBE2D3-207ENST00000394801 MSL3Q8N5Y2 521 aaKnown RBP16.88■□□□□ 0.29
UBE2D3-207ENST00000394801 MMS19Q96T76 1030 aa16.88■□□□□ 0.29
UBE2D3-207ENST00000394801 NLRC4Q9NPP4 1024 aa16.88■□□□□ 0.29
UBE2D3-207ENST00000394801 RSPH10B2B2RC85 870 aa16.88■□□□□ 0.29
UBE2D3-207ENST00000394801 ERLIN1O75477 346 aa16.88■□□□□ 0.29
UBE2D3-207ENST00000394801 RSPH10BP0C881 870 aa16.88■□□□□ 0.29
UBE2D3-207ENST00000394801 MYBP10242 640 aa16.88■□□□□ 0.29
UBE2D3-207ENST00000394801 DPEP1P16444 411 aa16.88■□□□□ 0.29
UBE2D3-207ENST00000394801 POLR2FP61218 127 aaKnown RBP16.88■□□□□ 0.29
UBE2D3-207ENST00000394801 DPY19L2P1Q6NXN4 242 aa16.88■□□□□ 0.29
UBE2D3-207ENST00000394801 B3GNT9Q6UX72 402 aa16.88■□□□□ 0.29
UBE2D3-207ENST00000394801 C1orf186Q6ZWK4 172 aa16.88■□□□□ 0.29
UBE2D3-207ENST00000394801 MIGA2Q7L4E1 593 aa16.88■□□□□ 0.29
UBE2D3-207ENST00000394801 GANQ9H2C0 597 aa16.88■□□□□ 0.29
UBE2D3-207ENST00000394801 ARMCX3Q9UH62 379 aaPredicted RBP16.88■□□□□ 0.29
UBE2D3-207ENST00000394801 SRGAP2O75044 1071 aa16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 PRPF6O94906 941 aaKnown RBP16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 ASNSP08243 561 aa16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 RHOXF2BP0C7M4 288 aa16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 PTGER2P43116 358 aa16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 PRELPP51888 382 aa16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 LDHDQ86WU2 507 aa16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 RHOXF2Q9BQY4 288 aa16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 CRACR2AQ9BSW2 395 aa16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 PLCB1Q9NQ66 1216 aa16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 L1RE1Q9UN81 338 aa16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 CCDC66A2RUB6 948 aa16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 EIF3DO15371 548 aaKnown RBP eCLIP16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 SLC16A3O15427 465 aaKnown RBP16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 TBCAO75347 108 aaKnown RBP16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 RPL13P26373 211 aaKnown RBP16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 SETQ01105 290 aaPredicted RBP16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 CTTNQ14247 550 aaKnown RBP16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 RNF10Q8N5U6 811 aaKnown RBP16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 DYDC2Q96IM9 177 aa16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 WDR11Q9BZH6 1224 aa16.87■□□□□ 0.29
UBE2D3-207ENST00000394801 METTL14Q9HCE5 456 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms