RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 APOL6Q9BWW8 343 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 STAP1Q9ULZ2 295 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 ARHGAP10A1A4S6 786 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 KRT1P04264 644 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 SESN3P58005 492 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 DALRD3Q5D0E6 543 aaKnown RBP7.98□□□□□ -1.13
SYNE2-205ENST00000394768 TTC17Q96AE7 1141 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 DDX56Q9NY93 547 aaKnown RBP7.98□□□□□ -1.13
SYNE2-205ENST00000394768 SMARCAL1Q9NZC9 954 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 VPS54Q9P1Q0 977 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 DISP3Q9P2K9 1392 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 SYNGAP1Q96PV0 1343 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 NCKAP1LP55160 1127 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 FKBP3Q00688 224 aaKnown RBP7.98□□□□□ -1.13
SYNE2-205ENST00000394768 FAM98CQ17RN3 349 aaKnown RBP7.98□□□□□ -1.13
SYNE2-205ENST00000394768 DSTYKQ6XUX3 929 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 ZNF653Q96CK0 615 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 RBM41Q96IZ5 413 aaKnown RBP7.98□□□□□ -1.13
SYNE2-205ENST00000394768 SLF1Q9BQI6 1058 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 FTOQ9C0B1 505 aaKnown RBP eCLIP7.98□□□□□ -1.13
SYNE2-205ENST00000394768 SNX5Q9Y5X3 404 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 KDM5CP41229 1560 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 ARIH2O95376 493 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 EPHB4P54760 987 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 TBC1D9BQ66K14 1250 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 ATP5JP18859 108 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 PODXLO00592 558 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 HUS1O60921 280 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 MT-ND3P03897 115 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 CCT5P48643 541 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 RCN2Q14257 317 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 RHOT2Q8IXI1 618 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 MCPH1Q8NEM0 835 aa7.98□□□□□ -1.13
SYNE2-205ENST00000394768 KRCC1Q9NPI7 259 aaPredicted RBP7.98□□□□□ -1.13
SYNE2-205ENST00000394768 KCNJ6P48051 423 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 MECOMQ03112 1051 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 MFSD14CQ5VZR4 134 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 BRIP1Q9BX63 1249 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 FOXP1Q9H334 677 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 RPN1P04843 607 aaKnown RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 CDH2P19022 906 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 PPP6R3Q5H9R7 873 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 PPP4R4Q6NUP7 873 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 KCNV1Q6PIU1 500 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 WDR75Q8IWA0 830 aaKnown RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 CEP170P1Q96L14 293 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 TBX22Q9Y458 520 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 CLASP1Q7Z460 1538 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 ZNF804BA4D1E1 1349 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 TBXAS1P24557 533 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 MAPRE2Q15555 327 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 AP1ARQ63HQ0 302 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 SMAP1Q8IYB5 467 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 ST13P4Q8IZP2 240 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 ZBTB38Q8NAP3 1195 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 GFM2Q969S9 779 aaKnown RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 GCNT4Q9P109 453 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 KIAA1468Q9P260 1216 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 EXOC1LA0A1B0GW35 172 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 CYBBP04839 570 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 TCF3P15923 654 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 PLEKHM3Q6ZWE6 761 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 MFN1Q8IWA4 741 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 CDC26Q8NHZ8 85 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 SCFD1Q8WVM8 642 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 PRAG1Q86YV5 1406 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 PLEKHG2Q9H7P9 1386 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 TBC1D12O60347 775 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 NEK2P51955 445 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 BASP1P80723 227 aaKnown RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 RNF26Q9BY78 433 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 KIAA1024Q9UPX6 916 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 CLCA2Q9UQC9 943 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 MLH3Q9UHC1 1453 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 KIAA0232Q92628 1395 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 RPAP1Q9BWH6 1393 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 COBLO75128 1261 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 SLC4A1P02730 911 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 ADCY2Q08462 1091 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 CATSPER1Q8NEC5 780 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 SLC10A4Q96EP9 437 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 DACH2Q96NX9 599 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 STN1Q9H668 368 aaKnown RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 MTX1Q13505 466 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 ASIC4Q96FT7 647 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 NHEJ1Q9H9Q4 299 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 FOXP2O15409 715 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 ASAP2O43150 1006 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 PRDM1O75626 825 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 FMNL1O95466 1100 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 KRT7P08729 469 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 ZFXP17010 805 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 CAPZA2P47755 286 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 MDM2Q00987 491 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 SDE2Q6IQ49 451 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 CALN1Q9BXU9 219 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 HGSO14964 777 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-205ENST00000394768 SGSM2O43147 1006 aa7.97□□□□□ -1.13
SYNE2-205ENST00000394768 KRT72Q14CN4 511 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms