RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 RPS6P62753 249 aaKnown RBP16.66■□□□□ 0.26
GPC3-202ENST00000394299 MAP3K9P80192 1104 aa16.66■□□□□ 0.26
GPC3-202ENST00000394299 MEA1Q16626 185 aa16.66■□□□□ 0.26
GPC3-202ENST00000394299 SYTL5Q8TDW5 730 aaPredicted RBP16.66■□□□□ 0.26
GPC3-202ENST00000394299 PPP1R9AQ9ULJ8 1098 aa16.66■□□□□ 0.26
GPC3-202ENST00000394299 GUCA1BQ9UMX6 200 aa16.66■□□□□ 0.26
GPC3-202ENST00000394299 CLIC2O15247 247 aa16.66■□□□□ 0.26
GPC3-202ENST00000394299 SLC26A4O43511 780 aa16.66■□□□□ 0.26
GPC3-202ENST00000394299 HIRAP54198 1017 aaPredicted RBP16.66■□□□□ 0.26
GPC3-202ENST00000394299 ZC2HC1CQ53FD0 456 aaPredicted RBP16.66■□□□□ 0.26
GPC3-202ENST00000394299 KRT26Q7Z3Y9 468 aa16.66■□□□□ 0.26
GPC3-202ENST00000394299 ZHX2Q9Y6X8 837 aa16.66■□□□□ 0.26
GPC3-202ENST00000394299 ATAD5Q96QE3 1844 aa16.66■□□□□ 0.26
GPC3-202ENST00000394299 KIF5CO60282 957 aa16.65■□□□□ 0.26
GPC3-202ENST00000394299 GCNT3O95395 438 aa16.65■□□□□ 0.26
GPC3-202ENST00000394299 HMGCS2P54868 508 aa16.65■□□□□ 0.26
GPC3-202ENST00000394299 NSMFQ6X4W1 530 aa16.65■□□□□ 0.26
GPC3-202ENST00000394299 C1orf186Q6ZWK4 172 aa16.65■□□□□ 0.26
GPC3-202ENST00000394299 MAEAQ7L5Y9 396 aa16.65■□□□□ 0.26
GPC3-202ENST00000394299 EPM2AIP1Q7L775 607 aaPredicted RBP16.65■□□□□ 0.26
GPC3-202ENST00000394299 CCDC125Q86Z20 511 aa16.65■□□□□ 0.26
GPC3-202ENST00000394299 DUSP10Q9Y6W6 482 aa16.65■□□□□ 0.26
GPC3-202ENST00000394299 MYCLP12524 364 aaPredicted RBP16.65■□□□□ 0.26
GPC3-202ENST00000394299 PTPRAP18433 802 aa16.65■□□□□ 0.26
GPC3-202ENST00000394299 NR2F2P24468 414 aa16.65■□□□□ 0.26
GPC3-202ENST00000394299 ITGB3BPQ13352 177 aaPredicted RBP16.65■□□□□ 0.26
GPC3-202ENST00000394299 KNOP1Q1ED39 458 aaKnown RBP16.65■□□□□ 0.26
GPC3-202ENST00000394299 RRAGAQ7L523 313 aa16.65■□□□□ 0.26
GPC3-202ENST00000394299 RETREG2Q8NC44 543 aa16.65■□□□□ 0.26
GPC3-202ENST00000394299 TEKT3Q9BXF9 490 aa16.65■□□□□ 0.26
GPC3-202ENST00000394299 ZSWIM4Q9H7M6 989 aa16.65■□□□□ 0.26
GPC3-202ENST00000394299 EHMT1Q9H9B1 1298 aa16.65■□□□□ 0.26
GPC3-202ENST00000394299 TUFT1Q9NNX1 390 aa16.65■□□□□ 0.26
GPC3-202ENST00000394299 NLRC4Q9NPP4 1024 aa16.65■□□□□ 0.26
GPC3-202ENST00000394299 MRFAP1Q9Y605 127 aa16.65■□□□□ 0.26
GPC3-202ENST00000394299 BACE1P56817 501 aa16.64■□□□□ 0.25
GPC3-202ENST00000394299 B3GNT9Q6UX72 402 aa16.64■□□□□ 0.25
GPC3-202ENST00000394299 ARHGAP27Q6ZUM4 889 aa16.64■□□□□ 0.25
GPC3-202ENST00000394299 SCYL3Q8IZE3 742 aa16.64■□□□□ 0.25
GPC3-202ENST00000394299 MYCT1Q8N699 235 aa16.64■□□□□ 0.25
GPC3-202ENST00000394299 TRERF1Q96PN7 1200 aa16.64■□□□□ 0.25
GPC3-202ENST00000394299 LXNQ9BS40 222 aa16.64■□□□□ 0.25
GPC3-202ENST00000394299 LACRTQ9GZZ8 138 aa16.64■□□□□ 0.25
GPC3-202ENST00000394299 GGA3Q9NZ52 723 aa16.64■□□□□ 0.25
GPC3-202ENST00000394299 LTBP3Q9NS15 1303 aa16.64■□□□□ 0.25
GPC3-202ENST00000394299 LRRC53A6NM62 1247 aa16.64■□□□□ 0.25
GPC3-202ENST00000394299 VWA5AO00534 786 aa16.64■□□□□ 0.25
GPC3-202ENST00000394299 ZNF263O14978 683 aa16.64■□□□□ 0.25
GPC3-202ENST00000394299 DHX15O43143 795 aaKnown RBP16.64■□□□□ 0.25
GPC3-202ENST00000394299 TBCAO75347 108 aaKnown RBP16.64■□□□□ 0.25
GPC3-202ENST00000394299 CASP4P49662 377 aa16.64■□□□□ 0.25
GPC3-202ENST00000394299 TKFCQ3LXA3 575 aa16.64■□□□□ 0.25
GPC3-202ENST00000394299 TRIM59Q8IWR1 403 aa16.64■□□□□ 0.25
GPC3-202ENST00000394299 ZNHIT6Q9NWK9 470 aaKnown RBP16.64■□□□□ 0.25
GPC3-202ENST00000394299 ARHGAP20Q9P2F6 1191 aa16.64■□□□□ 0.25
GPC3-202ENST00000394299 CTDP1Q9Y5B0 961 aaPredicted RBP16.64■□□□□ 0.25
GPC3-202ENST00000394299 RPTORQ8N122 1335 aa16.63■□□□□ 0.25
GPC3-202ENST00000394299 TMEM150BA6NC51 233 aa16.63■□□□□ 0.25
GPC3-202ENST00000394299 ATP9AO75110 1047 aa16.63■□□□□ 0.25
GPC3-202ENST00000394299 EPHA7Q15375 998 aa16.63■□□□□ 0.25
GPC3-202ENST00000394299 FIGNQ5HY92 759 aa16.63■□□□□ 0.25
GPC3-202ENST00000394299 MNS1Q8NEH6 495 aa16.63■□□□□ 0.25
GPC3-202ENST00000394299 CEP63Q96MT8 703 aa16.63■□□□□ 0.25
GPC3-202ENST00000394299 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.63■□□□□ 0.25
GPC3-202ENST00000394299 A0A1W2PQJ5 194 aa16.63■□□□□ 0.25
GPC3-202ENST00000394299 PEX10O60683 326 aa16.63■□□□□ 0.25
GPC3-202ENST00000394299 NOL4O94818 638 aa16.63■□□□□ 0.25
GPC3-202ENST00000394299 COG2Q14746 738 aa16.63■□□□□ 0.25
GPC3-202ENST00000394299 FBXO38Q6PIJ6 1188 aa16.63■□□□□ 0.25
GPC3-202ENST00000394299 ZNF280CQ8ND82 737 aa16.63■□□□□ 0.25
GPC3-202ENST00000394299 ZNF397Q8NF99 534 aaPredicted RBP16.63■□□□□ 0.25
GPC3-202ENST00000394299 BAP1Q92560 729 aa16.63■□□□□ 0.25
GPC3-202ENST00000394299 STK24Q9Y6E0 443 aa16.63■□□□□ 0.25
GPC3-202ENST00000394299 CETN3O15182 167 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 AKAP3O75969 853 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 FAM13AO94988 1023 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 SETQ01105 290 aaPredicted RBP16.62■□□□□ 0.25
GPC3-202ENST00000394299 PLS1Q14651 629 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 MCF2L2Q86YR7 1114 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 PICK1Q9NRD5 415 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 GPRC5DQ9NZD1 345 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 ZNF112Q9UJU3 913 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 PLAGL2Q9UPG8 496 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 SAMM50Q9Y512 469 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 ASTN1O14525 1302 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 SPDYE4A6NLX3 237 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 ENC1O14682 589 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 ZBED4O75132 1171 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 TADA3O75528 432 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 PPP2R3AQ06190 1150 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 KCNH2Q12809 1159 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 BAATQ14032 418 aaPredicted RBP16.62■□□□□ 0.25
GPC3-202ENST00000394299 PGM5Q15124 567 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 DCAF15Q66K64 600 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 FOXR2Q6PJQ5 311 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 MIER3Q7Z3K6 550 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 NEK11Q8NG66 645 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 NACC1Q96RE7 527 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 MAP7D2Q96T17 732 aa16.62■□□□□ 0.25
GPC3-202ENST00000394299 RMDN3Q96TC7 470 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms